SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13832
Pre Gene Modal
BGIBMGA011454
Annotation
PREDICTED:_uncharacterized_protein_LOC101736423_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.033
 

Sequence

CDS
ATGGAGGACCAAGGGAACAGTGATGAAAATATAGTAAACGCAATTGATGTTTTAACGAATATGTTTGGAAACATTGTGAGTAATGATGTGATTGTAACTATTGCTGAAAGCTGCTGCGGCAATCTTGATTTGTCAGTGGACGCAATTATGAGTATAACTAGTGATTCTAATTCAACCAAAACAAAATCAGCTGAAATGCAAGAAGTTGACGATTATGCTAGTTTGGATATAGCAACATCGATGAACAACGAAAAGCCTCCTGAATTGTCGGTCACTATTAATCAAAGAACAAGTGTAGATGAAGTCCCCATGTCTTATGTATCTGCAGCTCAAACTGCTCAAACACAATCTAAACAAATGCCAAAGCCAGATCGACAAATAATGAACCAAATGAATTTTTGGACAGACCAAATTCGTCAAATTATCATGCACCATAATAATGGTGCTAGAATAATGGTTATTATGAGAGGCCTGCCAGGTAGCGGTAAATCATATTTAGCCAGAAAAATTATAGAAATCATAATGGGATCAGATCCAAATAACTTTCACAACCACATATTTAGTGCTGATGATTTTTTCATAGTACGGGGCAAATATTTTTTTGATAAAAATAAAATATCTGCTGCGCATGAGTGGAATAGTCGGAGAATCTACTTTGCATTAAATAAAGGATTGAGTCCTATTATAGTAGATAACACTCACACTGAAATGTGGGAAATGAATTTTCCTGTTTACTATGGTGTACAATTTGGATACATTATAGAAATCGTAGAACCAAATACTCCATGGAAGTGGAATACAAACTTGTTGTTTAAAAAGAACACACACCACGTTCCTTTTACCTCTATTAAAAAAATGTTGGATAGATATGAAAGAGATGTTACCACAGATATGGCCTTAAAGTTTAGCAACGCATCATATCCCATCAACTTAACGCCTCCAGTTTTGAGAAAAATACCTCCTGTATTAAATGAAACTAACGTCGTAACAAATGCAGGTGAAAATTCTTCGTGGACACAGGCTAACTGTGATCAACAAGCTCACTCAAATGCTCGAGAAAATCAGAATAAACATATAAGTAACTCCGGTGAAAACTGCAGTCACTCATCTCAACCAATGAAGGAGATCAGTGATGATAAAATGGAATGTACATCGTACTCTAGTGCAAAAAATGATTTTGCTAATGAAAATAATGAACTAAAATCATCTAGCCACAACCAAATGGACGAATTAGAAAAAGAAAATACACAAACATCTGAAGAAAAAAATTCAATAATATTACATGATAAAGCAGTAAACCAAAATCAACTAAAGGAGGCTGAGAAATGCTTAAAAGAGATAGAAGAAGTGGAACAAGAATGGGAAAATGGAGAAATGTGGGAGGACGGTACTAAAAAAAATAATAGTAATGATAATTTACCAGCTGTCGAAACTGCCCCTAAACCTCCACGAAATTCTGTGGAAGCAAAATCTAATAAATTAATGGAATCGGTCAAAAAATGTGAAGATTGGAGTCGGATTTCCATGTACATGTCACCATGGCATGATGAAACCGAAACAATCCAAAATAATGATAAGCCTATTCCTACTGAAAAGAAAACTAGCACCACTTGCGTGGAAATAGGCGATACAGACCCATGTAAAAACAGCTACAAAATAATTTCGGCAGTAGCAAGAGATATTAATAGTTCTTATACTACGACGAGAAAAGAAAAAATTCCAGACCAGCGTATGTTAGATAAAAGCACCATGACCAATGAGCAAGTAATGACAGATTCTTTCAGGTGTAAAAATGAAGAAAAGCATTTTGTTGCATTCAGGAAGTTATTTAAAAACATAAGCAGAGCTGATTTGCGCGATGTTTTCGATAAATGCTGCGGTGATGTTAATTGGGCAGTTGACATTGTATTTGATGGAATGGCGAGTAAACTTTACGATGAAAGTGATGCACAAGATACTTCTGATGCAGAAGAAGATATAGCCGACGAATGTGATTGTTTAGCTGCTTATAATATAATTCCAGATAGAGCACAAGCCATTGAACTGAATTCCACAGCACCTGAAAGCAATGATGAAACCAAAGAAACACGGCCATTACAACAAAAACGTCCGAAACAAGAAGTTTCTTTGTCAGAAACGGTATTGCAGTTAAAAAAAGAGATAGAAAAAAGTGTGAAAATTTCAGAAGAACATTATTCTCCTCATTTTCTGAGAATAAGACAATTGCGGCGTGGTGAATACTCTACAAATGATGATGTATTGGCTGTGCCTAGTACATCCGGTCTTGGGAATAATTATTCAAATACAGCTGCTACGCCAACTGAGCTAGAATGTAAATCTAACGAGAATGAAGTATCTTCTATTAGTGATGATGACACAAATAGCGAAGCGGTTTCTGAAACATATGTAACTGTTGACTTGAGCAAGGGCTTAATTCAAATCTTAGATGAACTATTTGATAGAAAACAAATGCAGTATCCGGAAAACATTCTACCGGTTGCGAGTATGCCGATGTCTTTAATGAATGAAATAAACGCCTTATGGGTAGAGTCTTTAACTTATCAATTAGACCAGCAATCTGATCAGGCTTCCTTAATGTTGAAACAAGATGCGGAGCTAGCTAGGCAACTGGCTTCAAAAGAATTGGAGTTTATACAGGAGGGCAGGGAACCAGTTGTGCCGGATTTCAAAGAAATTATGGATATGGATCTTGCAGTATCATTGTATCAAAAAGATGTGGCGAAATGGAAGAAAAAAGAACCACAAGACTTGGCCGCTAAGATGACAAGAGAAAAACTTTACAACTTGTTCCCGGAAATTTCTCAAGATGTTCTAGGAGAATTACTAATGGCCCACGAAAATAATTTTCAAACCACCGTTGAGGTGCTGCTAATGTCAATAGGACGAACAGATATTTTGGAGGCCGAAAATGGATTAAACAAGTTTGTAATGGAGAAGGAACTTCAGCGCCAAAAGACTATACTAGAACAGGAGAGAAAGGCTCTTTCGGAAGAGGAGTGGCCTTTACTGCCAAAAAGCGAAGTGGTCGAAATGGGAACCGTTCAGTATTACCGGGATGAGGCAGAAATGCATTTAGAGCAGCGCAACTATAATCATAACAAGGCGCAACACTGTATCCGTTTGGGGATGCTGCAAGTAGCCGACTATTATATTGACGCTGCCAATCTCCATAAGCAAAAATACGAAATCGCCAAAAATCTCGCCGTTGCTTCACTTATACAGGTTCACGCCACAAGGAATCCGGACAGTGCGACCATAGATCTTCATTACCTGCGCGTTCTGGAAGCCAAGGAGTCACTTGACATCTTTCTGGACACGCATATACGCAAGCTGAAAGAGTCGCACGCGCGCGGCGGTTCGCGATACAACACGCTGTATTTCATCACCGGTAGGGGCGCTCACAGCAACGGACGACCGAAGATAAAGCCCGCCGTGAAGAAGCGTTTGCTTCAACGTGGCCTTGCCTACTCTGAGCGCAATCCCGGAATGCTGACGGCCAAAGTATGCGCGGATGACAAGCTATCGTACCAACTTCAGAGTTCCTAG
Protein
MEDQGNSDENIVNAIDVLTNMFGNIVSNDVIVTIAESCCGNLDLSVDAIMSITSDSNSTKTKSAEMQEVDDYASLDIATSMNNEKPPELSVTINQRTSVDEVPMSYVSAAQTAQTQSKQMPKPDRQIMNQMNFWTDQIRQIIMHHNNGARIMVIMRGLPGSGKSYLARKIIEIIMGSDPNNFHNHIFSADDFFIVRGKYFFDKNKISAAHEWNSRRIYFALNKGLSPIIVDNTHTEMWEMNFPVYYGVQFGYIIEIVEPNTPWKWNTNLLFKKNTHHVPFTSIKKMLDRYERDVTTDMALKFSNASYPINLTPPVLRKIPPVLNETNVVTNAGENSSWTQANCDQQAHSNARENQNKHISNSGENCSHSSQPMKEISDDKMECTSYSSAKNDFANENNELKSSSHNQMDELEKENTQTSEEKNSIILHDKAVNQNQLKEAEKCLKEIEEVEQEWENGEMWEDGTKKNNSNDNLPAVETAPKPPRNSVEAKSNKLMESVKKCEDWSRISMYMSPWHDETETIQNNDKPIPTEKKTSTTCVEIGDTDPCKNSYKIISAVARDINSSYTTTRKEKIPDQRMLDKSTMTNEQVMTDSFRCKNEEKHFVAFRKLFKNISRADLRDVFDKCCGDVNWAVDIVFDGMASKLYDESDAQDTSDAEEDIADECDCLAAYNIIPDRAQAIELNSTAPESNDETKETRPLQQKRPKQEVSLSETVLQLKKEIEKSVKISEEHYSPHFLRIRQLRRGEYSTNDDVLAVPSTSGLGNNYSNTAATPTELECKSNENEVSSISDDDTNSEAVSETYVTVDLSKGLIQILDELFDRKQMQYPENILPVASMPMSLMNEINALWVESLTYQLDQQSDQASLMLKQDAELARQLASKELEFIQEGREPVVPDFKEIMDMDLAVSLYQKDVAKWKKKEPQDLAAKMTREKLYNLFPEISQDVLGELLMAHENNFQTTVEVLLMSIGRTDILEAENGLNKFVMEKELQRQKTILEQERKALSEEEWPLLPKSEVVEMGTVQYYRDEAEMHLEQRNYNHNKAQHCIRLGMLQVADYYIDAANLHKQKYEIAKNLAVASLIQVHATRNPDSATIDLHYLRVLEAKESLDIFLDTHIRKLKESHARGGSRYNTLYFITGRGAHSNGRPKIKPAVKKRLLQRGLAYSERNPGMLTAKVCADDKLSYQLQSS

Summary

Pfam
PF02845   CUE        + More
PF01713   Smr
PF08590   DUF1771
Interpro
IPR027417   P-loop_NTPase        + More
IPR036063   Smr_dom_sf       
IPR002625   Smr_dom       
IPR013899   DUF1771       
IPR003892   CUE       
IPR009060   UBA-like_sf       
SUPFAM
SSF46934   SSF46934        + More
SSF160443   SSF160443       
SSF52540   SSF52540       
PDB
2VKC     E-value=5.50775e-08,     Score=141

Ontologies

Topology

Length:
1188
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0548600000000002
Exp number, first 60 AAs:
0.04905
Total prob of N-in:
0.00247
outside
1  -  1188
 
 

Population Genetic Test Statistics

Pi
214.355884
Theta
172.612559
Tajima's D
0.790927
CLR
0.718342
CSRT
0.596870156492175
Interpretation
Uncertain
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