Pre Gene Modal
BGIBMGA011455
Annotation
_putative_cuticle_protein_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 1.857
Sequence
CDS
ATGTACACCAAGCTGATCGTTGCTCTGTGCGCTGTAAGCGTAGTCCGCGCTGGTGGTCTCCTCGGAGCTGCTCCCTTGGCTTACAGCCACGCTATCGCGGCTCCTGCTGTGGTAACTAAAACCATCAGTCCAGCTGTGTCTTCGGTTTCTTCTTACTCAACTCACACCGCTCACGGTGGCCACATCGCTGCCTACGGTGCTGCTCCAGTCTTCACTAAGACCATTGCTGCTCCTGCCGTCTCTTATGCTGCTGCACCAGCATACTCATACGCTACTGGCCCAGCATATTCGTACGCCGCTGCACCATCGTACGCTTATGCTGCATCTCCGGTTGTGACCAAGACCATTTCTCCAGCTGTTTCCTCAGTATCTTCTTACTCGTCCACAACCGCTCATGGATCACCATCTTTCGCGACATACTCTGCTCACGGTGCTCCAGCCATCGCCGCATACTCCGCCCACGCTACACCCGCAGTTGCGACGTACTCCGCGCCTGTTGTCGCTAAGGCGATCGCTCCCGCTGTAGCTTACGCTGCACCTGCGGTTGTCTCCAAGACCATCAGTCCTGCAGTATCTTCTGTGTCATCTTACTCCTCTACCACAGCCCATGGTGGTTCTTACGGAGGACTCTACGCTGCCCCCGCTGTATCTACCTATGCTGCTGCGCCGATAGTGACCAAGTCTTATGCCGCCCCTGCTGTGGCTACCTACGCCGCTGCCCCCGTTGTGGCTAAATACGCAGCTCCTGCTTACGCCACCTACTCTACCGGTCCCCTGGTTGCCAAGACCTACGCCGCTCCCGCCGTCACCACCTACGCAGCTACAGCCCCGGTTCTAAAGTCGGCTGTCACATATTCTGCTGCCCCCGCTGTGTCTCACATCTCCTTCAGCGGTCACGGTGCCACATACGGTTGGTAA
Protein
MYTKLIVALCAVSVVRAGGLLGAAPLAYSHAIAAPAVVTKTISPAVSSVSSYSTHTAHGGHIAAYGAAPVFTKTIAAPAVSYAAAPAYSYATGPAYSYAAAPSYAYAASPVVTKTISPAVSSVSSYSSTTAHGSPSFATYSAHGAPAIAAYSAHATPAVATYSAPVVAKAIAPAVAYAAPAVVSKTISPAVSSVSSYSSTTAHGGSYGGLYAAPAVSTYAAAPIVTKSYAAPAVATYAAAPVVAKYAAPAYATYSTGPLVAKTYAAPAVTTYAATAPVLKSAVTYSAAPAVSHISFSGHGATYGW
Summary
Proteomes
Pfam
PF11018 Cuticle_3
Interpro
IPR022727
Cuticle_C1
Ontologies
GO
Topology
SignalP
Position: 1 - 17,
Likelihood: 0.860225
Length:
305
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
31.43332
Exp number, first 60 AAs:
19.36964
Total prob of N-in:
0.81491
POSSIBLE N-term signal
sequence
inside
1 - 4
TMhelix
5 - 27
outside
28 - 305
Population Genetic Test Statistics
Pi
220.560309
Theta
186.420107
Tajima's D
0.643067
CLR
0.091032
CSRT
0.551522423878806
Interpretation
Uncertain
