Gene

KWMTBOMO13823

Pre Gene Modal

BGIBMGA011556

Annotation

PREDICTED:_circadian_clock-controlled_protein-like_[Amyelois_transitella]

Location

Bomo_Chr23(+):10297510-10318404      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.496 PlasmaMembrane   Reliability : 1.155

CDS

ATGTCTGTTTATGGTATTACGTTAAGTATTCTTCTACTTTTTTTCCGCAGCGGCTCAACAAAATTAGCACCTGACTACATACATCCATGTAACGACACGTCCAGCGAATGCTTAGTGAAGGCAACACAGGACGCGGTTCCGCATTTCGTAAGGGGTATTCCCGAACTTGACATTCCGACATTAGACCCGTTCGTGATCGAGGAGCTGTCCATACCGTTGAGCGGTGTCAAAGTCACCTTCCTTCAAGGAAAAGTATCTGGATTTAAAAACTGCATAGTCGATAATGTTATATCGGAATTAGATAAACGACATTTCGTGCTCCAATTTCACACTAATTTAACGATCAAAGGACAATATACAGCTGTGGGAAGACTGTTATTATTCCCTATAAACGGAGAGGGTGATGCCACGATAAAATTAACTAACCTGAGGATGAAAGTAGACATCAACACCAAATATATAAAAGGCAAAAACGGACTTCATCACTTCGGATTGAGAAACTACAAATACACCTTTGATTACGGTGACCGGGTTTCCTTTGATTTGCAGAACATATTCAAAGAGAGCAAACAACTTAGTGACACTGTATTAAATTTCCTGAATGAAAACTGGAAAACAGTTGCGGAAGAGTTTGGGAAACCCATCGTGGATTACGCCGTAGAACTGGCTATCAATACCATTAAAAAATTCTTCCTAGCTGTCCCCTACGAAGAACTTATCAACGTTCCGATACCTATATAA

Protein

MSVYGITLSILLLFFRSGSTKLAPDYIHPCNDTSSECLVKATQDAVPHFVRGIPELDIPTLDPFVIEELSIPLSGVKVTFLQGKVSGFKNCIVDNVISELDKRHFVLQFHTNLTIKGQYTAVGRLLLFPINGEGDATIKLTNLRMKVDINTKYIKGKNGLHHFGLRNYKYTFDYGDRVSFDLQNIFKESKQLSDTVLNFLNENWKTVAEEFGKPIVDYAVELAINTIKKFFLAVPYEELINVPIPI

Uniprot

H9JPV1   A0A212FJZ7   A0A2A4K4J1   I4DIX3   A0A3G1KL00   A0A194QT83   + More
A0A2W1BSP1   A0A194PN74   D2SNR6   I4DLC7   A0A0K8TUQ5   H9JPV0   A0A194QP48   A0A0K8TU33   A0A3G1KKW7   A0A2A4K5Q1   A0A2H1VEP5   A0A161IAX6   A0A2W1BVJ0   A0A212FF97   A0A3S2PL81   A0A0N1I5B6   A0A212F7T6   A0A194RPF4   A0A212FJY3   B5ABT3   A0A0K8TU37   A0A2W1BNM1   A0A2A4K408   A0A2H1VEI9   A0A2H1V9K3   A0A2A4K4M3   B5ABT1   A0A2A4JK18   Q9U510   H9JPK2   I4DIS3   A0A2H1V400   A0A2H1X2K5   A0A3B0EWC7   A0A2W1BVK0   A0A194PMH2   C6KYM6   Q402E0   A0A2A4JM86   A0A168T0I5   A0A0L7KX55   A0A3S2NLV1   A0A3G1KKZ9   D2SNY3   A0A212F4C1   A0A0K8TUQ8   Q402D7   A0A3S2TTA3   A0A0K8TUP1   A0A3S2P7X1   C6KYM4   A0A2H1VDE1   A0A2H1W5H9   A0A2A4J6Y8   A0A2A4JN36   A0A2W1BU02   A0A0K8TVA7   A0A2W1BP78   A0A0N1PH76   A0A3S2NPG7   Q402D4   H9IV84   D2SNM7   I4DMS7   A0A2A4J6Y4   A0A194PZM7   H9JPU8   H9JPU7   A0A2H1VTZ1   A0A0N0PDH3   D2SNW8   A0A212F8A8   A0A2W1BMT1   A0A1E1WUL1   A0A194QA85   Q402D8   A0A0K8TU43   A0A2H1V896   A0A194RA67   A0A161IWD8   H9IVP4   A0A3G1KKW8   A0A194QT79   A0A3G1KKW6   A0A194PSS8   A0A2H1VI74   A0A1E1W258   I4DJ62   A0A3G1KL03  

Pubmed

19121390    22118469    22651552    28973484    26354079    28756777    + More
20074338    26017144    19073605    23563188    10620045    14614147    16756543    26227816   

EMBL

BABH01015388    AGBW02008184    OWR54054.1    NWSH01000154    PCG78989.1    AK401241    + More
BAM17863.1    MF196307    ATU07289.1    KQ461195    KPJ06751.1    KZ149950    PZC76664.1    KQ459600    KPI94189.1    EZ407196    ACX53757.1    AK402095    BAM18717.1    GCVX01000234    JAI17996.1    BABH01015382    KPJ06750.1    GCVX01000231    JAI17999.1    MF196303    ATU07285.1    PCG78990.1    ODYU01002134    SOQ39241.1    KT443978    ANC68526.1    PZC76666.1    AGBW02008844    OWR52406.1    RSAL01000004    RVE54631.1    KQ459037    KPJ04311.1    AGBW02009838    OWR49779.1    KQ460075    KPJ17901.1    OWR54053.1    EU834742    ACF39403.1    GCVX01000226    JAI18004.1    PZC76662.1    PCG78987.1    ODYU01002142    SOQ39253.1    ODYU01001389    SOQ37507.1    NWSH01000134    PCG79201.1    EU834740    ACF39401.1    NWSH01001221    PCG72068.1    AF117578    AAF16700.1    BABH01015389    BABH01015390    BABH01015391    AK401191    BAM17813.1    ODYU01000574    SOQ35570.1    ODYU01012978    SOQ59553.1    RBVL01000123    RKO11885.1    PZC76676.1    KPI94188.1    AB383144    BAH97100.1    AB196700    BAE43408.1    NWSH01000992    PCG73195.1    KT443975    ANC68523.1    JTDY01004884    KOB67634.1    RSAL01000006    RVE54237.1    MF196312    ATU07294.1    EZ407269    ACX53824.1    AGBW02010413    OWR48563.1    GCVX01000229    JAI18001.1    AB196703    BAE43411.1    RVE54627.1    GCVX01000232    JAI17998.1    RVE54626.1    AB383142    BAH97098.1    ODYU01001950    SOQ38859.1    ODYU01006397    SOQ48206.1    NWSH01002968    PCG67183.1    PCG73196.1    PZC76677.1    GCVX01000230    JAI18000.1    KZ149944    PZC76852.1    KPJ04307.1    RSAL01000173    RVE45077.1    AB196706    AB383141    BAE43414.1    BAH97097.1    BABH01000685    EZ407156    ACX53718.1    AK402595    BAM19217.1    PCG67182.1    KQ459582    KPI98776.1    BABH01015366    BABH01015365    ODYU01004270    SOQ43962.1    KQ460202    KPJ17177.1    EZ407252    ACX53809.1    AGBW02009765    OWR49975.1    KZ149964    PZC76238.1    GDQN01000386    JAT90668.1    KQ459299    KPJ01910.1    AB196702    AB383136    BAE43410.1    BAH97092.1    GCVX01000228    JAI18002.1    ODYU01001173    SOQ37016.1    KQ460473    KPJ14399.1    KT443977    ANC68525.1    BABH01039669    BABH01039670    MF196302    ATU07284.1    KPJ06746.1    MF196296    ATU07278.1    KQ459595    KPI95814.1    ODYU01002699    SOQ40537.1    GDQN01009976    JAT81078.1    AK401330    BAM17952.1    MF196305    ATU07287.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000053268    UP000283053    + More
UP000276569    UP000037510   

PRIDE

H9JPV1    H9JPV0    H9JPK2    C6KYM6    Q402E0    Q402D7    + More
C6KYM4    Q402D4    H9IV84    H9JPU8    H9JPU7    Q402D8    H9IVP4   

Pfam

PF06585   JHBP        + More
PF07648   Kazal_2
PF00050   Kazal_1

Interpro

IPR038606   To_sf        + More
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR002350   Kazal_dom       
IPR036058   Kazal_dom_sf       

SUPFAM

SSF100895   SSF100895       

Gene 3D

3.15.10.30    

ProteinModelPortal

H9JPV1   A0A212FJZ7   A0A2A4K4J1   I4DIX3   A0A3G1KL00   A0A194QT83   + More
A0A2W1BSP1   A0A194PN74   D2SNR6   I4DLC7   A0A0K8TUQ5   H9JPV0   A0A194QP48   A0A0K8TU33   A0A3G1KKW7   A0A2A4K5Q1   A0A2H1VEP5   A0A161IAX6   A0A2W1BVJ0   A0A212FF97   A0A3S2PL81   A0A0N1I5B6   A0A212F7T6   A0A194RPF4   A0A212FJY3   B5ABT3   A0A0K8TU37   A0A2W1BNM1   A0A2A4K408   A0A2H1VEI9   A0A2H1V9K3   A0A2A4K4M3   B5ABT1   A0A2A4JK18   Q9U510   H9JPK2   I4DIS3   A0A2H1V400   A0A2H1X2K5   A0A3B0EWC7   A0A2W1BVK0   A0A194PMH2   C6KYM6   Q402E0   A0A2A4JM86   A0A168T0I5   A0A0L7KX55   A0A3S2NLV1   A0A3G1KKZ9   D2SNY3   A0A212F4C1   A0A0K8TUQ8   Q402D7   A0A3S2TTA3   A0A0K8TUP1   A0A3S2P7X1   C6KYM4   A0A2H1VDE1   A0A2H1W5H9   A0A2A4J6Y8   A0A2A4JN36   A0A2W1BU02   A0A0K8TVA7   A0A2W1BP78   A0A0N1PH76   A0A3S2NPG7   Q402D4   H9IV84   D2SNM7   I4DMS7   A0A2A4J6Y4   A0A194PZM7   H9JPU8   H9JPU7   A0A2H1VTZ1   A0A0N0PDH3   D2SNW8   A0A212F8A8   A0A2W1BMT1   A0A1E1WUL1   A0A194QA85   Q402D8   A0A0K8TU43   A0A2H1V896   A0A194RA67   A0A161IWD8   H9IVP4   A0A3G1KKW8   A0A194QT79   A0A3G1KKW6   A0A194PSS8   A0A2H1VI74   A0A1E1W258   I4DJ62   A0A3G1KL03  

PDB

4G0S     E-value=1.08554e-44,     Score=451

KEGG

101736245    no KO assigned | (RefSeq) circadian clock-controlled protein-like

GO

GO:0004867  

SignalP

Position:   1 - 20,         Likelihood:  0.908316

 

 

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18883

Exp number, first 60 AAs:

0.18508

Total prob of N-in:

0.03287

outside

1  -  246

 

 

Pi

255.972725

Theta

172.686904

Tajima's D

1.280764

CLR

0.344879

CSRT

0.731113444327784

Interpretation

Uncertain