SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13820  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011459
Annotation
odorant_binding_protein_LOC100301495_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.892 Extracellular   Reliability : 1.268
 

Sequence

CDS
ATGGTTGGTTTCAAAATATTGTTTACTTTATGCGCGTTTGCCATTTGTTTTTGTGCTTCGGCTTATGTTGACACCTTACAAAAATGCGGCAAAAGCGATGCAGTTTGCCAAAAAAAGTTGCTCCAATCAGTATTAAAGTCGATCTCTAAAACCGGTATACCTGAACTTGATATACCACAAATAGATCCGATACAACTTAAAGGCTTCAATGTAGCTATACTCGACCTAGTGAACATAACCCTCGTTGATGGAGTAGCTAAGGGAGTTAAAGACTGCACAGTCAATAAATTTGAAGCCAATTTCGACGATCTACATGCAAGTATCGAGCTAGTCTGTGATATAACTATCAAAGGACATTACTCAGTTTACTCAGGGAGTCCCCTTATTAAAAACTTTTTAGGAGGAGATAATATCCATGGTGATGGAAATGGAAAAGCGAAAATAGAAAAGTTCAAAGTTGCATTTGATTTCGATTTCACCGTAGAAAAACGAGGAGATGATTTATTCATTAAAAGCAGCATTGACAAGATGAAATACACGTACGATGTTTTAGGTAAAATGGTATTTGCAGCTGATAACCTTTACGTCGGAAATAAAGAACAAAGTGCTTCCATCGTCAAGCTTATGAACGAAAACTGGCGTATTTTAATGGATATGGTCGGAAAGCAATTCGTAGAGAAAGCTATGAATTTTGTTTTCAACTTTACTCAGAAGTTCTTCAGCAACGTTCCCACTAAGAATTATATCGTGGATGATTTGGAAAATTATGTCAGTAGTTGA
Protein
MVGFKILFTLCAFAICFCASAYVDTLQKCGKSDAVCQKKLLQSVLKSISKTGIPELDIPQIDPIQLKGFNVAILDLVNITLVDGVAKGVKDCTVNKFEANFDDLHASIELVCDITIKGHYSVYSGSPLIKNFLGGDNIHGDGNGKAKIEKFKVAFDFDFTVEKRGDDLFIKSSIDKMKYTYDVLGKMVFAADNLYVGNKEQSASIVKLMNENWRILMDMVGKQFVEKAMNFVFNFTQKFFSNVPTKNYIVDDLENYVSS

Summary

EMBL
BABH01015380    AB353892    BAH36761.1    EZ407236    ACX53793.1    NWSH01000154    + More
PCG78994.1    GDQN01007771    JAT83283.1    KZ149950    PZC76670.1    ODYU01007891    SOQ51061.1    KP975114    ALT31633.1    KQ459037    KPJ04312.1    AB196707    BAE43415.1    BABH01015381    AB383139    BAH97095.1    AB294514    BAF47402.1    KQ461195    KPJ06749.1    AGBW02008845    OWR52403.1    U05270    AAA21588.1    PCG78991.1    KU096843    AMY63176.1    PZC76667.1    GDQN01009101    JAT81953.1    GDQN01007919    JAT83135.1    PCG78992.1    PZC76669.1    ODYU01005913    SOQ47295.1    KT443973    ANC68521.1    SOQ51062.1    SOQ47296.1    PZC76668.1    OWR52405.1    AK401191    BAM17813.1    KQ459600    KPI94188.1    PCG78990.1    KT443978    ANC68526.1    PZC76666.1    BABH01015389    BABH01015390    BABH01015391    PCG78987.1    AK402095    BAM18717.1    GCVX01000234    JAI17996.1    KPJ06750.1    MF196303    ATU07285.1    ODYU01002134    SOQ39241.1    AGBW02008844    OWR52406.1    MF196307    ATU07289.1    PZC76662.1    BABH01015382    AK401241    BAM17863.1    GCVX01000231    JAI17999.1    KPI94189.1    PCG78989.1    KPJ06751.1    BABH01015388    ODYU01001389    SOQ37507.1    RSAL01000004    RVE54631.1    ODYU01001173    SOQ37019.1    PZC76676.1    PZC76664.1    RBVL01000123    RKO11885.1    AGBW02008184    OWR54054.1    OWR54053.1    MF196298    ATU07280.1    AB383144    BAH97100.1    NWSH01000992    PCG73195.1    AB196700    BAE43408.1    NWSH01001221    PCG72068.1    GDQN01009976    JAT81078.1    ODYU01000574    SOQ35570.1    KZ149944    PZC76852.1    GCVX01000228    JAI18002.1    EZ407196    ACX53757.1    NWSH01002968    PCG67183.1    KT443974    ANC68522.1    KPJ04307.1    AF117578    AAF16700.1    PCG67182.1    GCVX01000229    JAI18001.1    RVE54626.1    KQ460075    KPJ17901.1    EZ407156    ACX53718.1    RVE54627.1    BABH01039662    MF196312    ATU07294.1    ODYU01012978    SOQ59553.1    AGBW02010413    OWR48563.1    EU834740    ACF39401.1    GCVX01000226    JAI18004.1    EU834742    ACF39403.1    EZ407269    ACX53824.1    MF196296    ATU07278.1    KZ149964    PZC76240.1    KQ459595    KPI95932.1    KT443975    ANC68523.1    AGBW02009838    OWR49779.1    KX585302    ARO70195.1    PCG73196.1    AB383142    BAH97098.1    NWSH01001136    PCG72453.1   
Pfam
PF06585   JHBP        + More
PF07648   Kazal_2
PF00050   Kazal_1
Interpro
IPR038606   To_sf        + More
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR002350   Kazal_dom       
IPR036058   Kazal_dom_sf       
SUPFAM
SSF100895   SSF100895       
Gene 3D
PDB
4G0S     E-value=4.21728e-15,     Score=196

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.991046
 
 
Length:
259
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.59869
Exp number, first 60 AAs:
7.56458
Total prob of N-in:
0.24567
outside
1  -  259
 
 

Population Genetic Test Statistics

Pi
273.784694
Theta
186.470602
Tajima's D
1.515171
CLR
0
CSRT
0.793910304484776
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 MVFAADNIYVGNK 95.24 3e-07
29197581 MVFAADNIYVGNK 95.24 3e-07
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