Gene

KWMTBOMO13818

Pre Gene Modal

BGIBMGA011554

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_trace_amine-associated_receptor_1_[Bombyx_mori]

Location

Bomo_Chr23(+):10131640-10135255      View in EpiBrowser

Full name

Amine oxidase      

Location in the cell

Extracellular   Reliability : 1.716 PlasmaMembrane   Reliability : 2.337

CDS

ATGGTTTTGCCGAGATCCGGGTACTACTTCAACTCAACTGGGCTTATGGCTTGTGACGTGTTCCACAGTAGGGTTGCGTTCAGGATATTGTCATGCTGTGCCTATTATTTCCCTACAACAATGGCCTTAATGTACTGTTACGGGTCTGGATTTCACGTCAGTAAAACTAGGACCAAATGTGATGAGCCTATAAGACCTAATGGTGTACCCGTGCCGTGCACGAAAACAACACATGGCGATCACGAAATTGTGATACAAGCTCCTGTGAGACCTCATAGCGTCAGCACGTCCAGAACAATGGCCGCTATGTCTTTGGGTTTTATTGTGATGGTTACGCCAGCTACTATTCAGGAAGTTGTTGCGGCTTGTACTGGTTGCAAGGTTCCACCTTCTCTGGACTTTATCGTGACGTGGTTGGCGTTGAGTAATAGTTTCTGGAATCCTTTCCTGTACTGGCTATTAAATGGACACTTTAGAAGAATCAGCAATGAGCTGTTACAATATTATGTATGCTGCAGGAGAACGAAACCTTTTCCTCAAAACTATGAAAAACGATCTGGATGCTGCGGTTCACCTATTCCATCTGATTTGAATTCAAAAGGTGAATTCGAAGGACTTGGAGAAAAGTATTGGGGTGAAATTTTGGAACGCACCGTTTCCTCAACATCTCTCCATGCTATTCAAAAAGCTTGCCACAGAGAGCACCCTCACCGATGTACAGGGTCCTTCAAAGGCTGCCCCACAAATGCTTGTAAATATGATCATAGATACTTTGAAGGGTACGGTCCCTCTGATTACCGGCATTTGGATAGATCAGCTTTTCAAATTGAATCATGTTCGAGACACTGTCGATTAAAAAATTCTGATTTTTGTTTGTTTAAACCGAGTCCAAGCCTGGACTGCGGACGATCGCGCTCTAACCTTAGTTTAGATGAGAGCAACTTTATTAAGACTTGTAACGGACGGCATCCGGAATTGTGA

Protein

MVLPRSGYYFNSTGLMACDVFHSRVAFRILSCCAYYFPTTMALMYCYGSGFHVSKTRTKCDEPIRPNGVPVPCTKTTHGDHEIVIQAPVRPHSVSTSRTMAAMSLGFIVMVTPATIQEVVAACTGCKVPPSLDFIVTWLALSNSFWNPFLYWLLNGHFRRISNELLQYYVCCRRTKPFPQNYEKRSGCCGSPIPSDLNSKGEFEGLGEKYWGEILERTVSSTSLHAIQKACHREHPHRCTGSFKGCPTNACKYDHRYFEGYGPSDYRHLDRSAFQIESCSRHCRLKNSDFCLFKPSPSLDCGRSRSNLSLDESNFIKTCNGRHPEL

Cofactor

FAD

Similarity

Belongs to the flavin monoamine oxidase family.

Uniprot

A0A2W1BSQ1   A0A2A4JNN1   A0A2H1V842   A0A0N1IN82   A0A194QMJ0   A0A212F8C4   + More
A0A0L7L1T7   A0A2J7QCM0   A0A0I9QPQ2   A0A1Y1LRN1   N1NV95   A0A139WMY1   A0A336LJ54   A0A336LML6   N6T188   A0A1J1IZZ7   A0A195BS88   A0A182LHB7   A0A2P8XKP4   A0A0K2T3B4   A0A1B0FQF0  

EC Number

1.4.3.-

Pubmed

28756777    26354079    22118469    26227816    24952173    28004739    + More
18054377    18025266    18316733    20068045    21843505    23604020    18362917    19820115    23537049    20966253    29403074   

EMBL

KZ149950    PZC76674.1    NWSH01000992    PCG73194.1    ODYU01000984    SOQ36572.1    + More
KQ459037    KPJ04308.1    KQ461195    KPJ06747.1    AGBW02009765    OWR49973.1    JTDY01003530    KOB69395.1    NEVH01016289    PNF26315.1    BK008817    DAA64806.1    GEZM01050292    JAV75631.1    BK005874    DAA64511.1    KQ971312    KYB29340.1    UFQT01000020    SSX17880.1    SSX17879.1    APGK01048271    KB741103    KB632401    ENN73854.1    ERL94922.1    CVRI01000065    CRL05781.1    KQ976423    KYM88880.1    PYGN01001848    PSN32542.1    HACA01002726    CDW20087.1    CCAG010017087   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    UP000235965    + More
UP000007266    UP000019118    UP000030742    UP000183832    UP000078540    UP000075882    UP000245037    UP000092444   

Pfam

PF00001   7tm_1        + More
PF06585   JHBP
PF01593   Amino_oxidase
PF00160   Pro_isomerase

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR038606   To_sf       
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR001613   Flavin_amine_oxidase       
IPR002937   Amino_oxidase       
IPR036188   FAD/NAD-bd_sf       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR029000   Cyclophilin-like_dom_sf       

SUPFAM

SSF51905   SSF51905        + More
SSF50891   SSF50891       

Gene 3D

3.15.10.30     3.50.50.60     2.40.100.10    

ProteinModelPortal

A0A2W1BSQ1   A0A2A4JNN1   A0A2H1V842   A0A0N1IN82   A0A194QMJ0   A0A212F8C4   + More
A0A0L7L1T7   A0A2J7QCM0   A0A0I9QPQ2   A0A1Y1LRN1   N1NV95   A0A139WMY1   A0A336LJ54   A0A336LML6   N6T188   A0A1J1IZZ7   A0A195BS88   A0A182LHB7   A0A2P8XKP4   A0A0K2T3B4   A0A1B0FQF0  

PDB

5WIV     E-value=4.27729e-06,     Score=119

KEGG

101735978    no KO assigned | (RefSeq) trace amine-associated receptor 1

GO

GO:0004930   GO:0016021   GO:0008528   GO:0005887   GO:0007218   GO:0016491   GO:0003755   GO:0007186   GO:0016075   GO:0003677   GO:0005524   GO:0016787   GO:0004713   GO:0015930  

Length:

326

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

60.92716

Exp number, first 60 AAs:

21.84489

Total prob of N-in:

0.11069

POSSIBLE N-term signal

sequence

outside

1  -  326

 

 

Pi

292.769446

Theta

185.632548

Tajima's D

1.351698

CLR

0.13517

CSRT

0.748662566871656

Interpretation

Uncertain