Gene

KWMTBOMO13817

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_trace_amine-associated_receptor_1_[Bombyx_mori]

Location

Bomo_Chr23(+):10128030-10130417      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.708

CDS

ATGTTCGACTCGACGACAAAAGGCGCATTGCTGGTAGCGCCTTCTCTATCAAACAGTTCGTGCTGGATGAATGGCAAAGGTTGGCCTTCGACTCTACCAGCACCCGGAGACATCGTAAAGGCTTTATTCATTTTTGCACTCTCCACTTCAATTGTCCTTGGGAATCTCATCTTAATCTGCGTTATGAATAATCGACGTTACATCAAATATATTGGAAATCAGCCAAGATACCTGCTGACGTCACTCGCTCTGAACGATTTGTTCACCGGAATCTTGATAGCTCCAGTGGCTCTTCTGCCTGCCCTTTACAAGTGTTGGCCGTATGGCGAGATATTTTGTCAGATACAGGCTCTGTTGAGGGGAGCCGTGAGTCAACAAAACGCCGTTATTCTCGTCTGCATGGCGATTGACCGTTACCTTTATTTGTTACACCCGAATACTTATCATAAGCATTCCAGCAAAAAGGTGAGATTCTTATGA

Protein

MFDSTTKGALLVAPSLSNSSCWMNGKGWPSTLPAPGDIVKALFIFALSTSIVLGNLILICVMNNRRYIKYIGNQPRYLLTSLALNDLFTGILIAPVALLPALYKCWPYGEIFCQIQALLRGAVSQQNAVILVCMAIDRYLYLLHPNTYHKHSSKKVRFL

Uniprot

A0A2W1BSQ1   A0A2A4JNN1   A0A2H1V842   A0A194QMJ0   A0A0N1IN82   A0A3L8DYU8   + More
E2AB52   A0A087ZU11   A0A2A3EJH9   A0A195FGW2   U4UQZ6   A0A182UZF6   A0A151I8Q5   Q17NZ0   A0A182RLK8   A0A182FLI2   A0A151JLT2   A0A158NY54   N1NV95   A0A151WHE7   B0XCW9   A0A195BS88   E9IFZ6   A0A139WMY1   A0A2J7QCM0   A0A0L7QP35   A0A2P8YDK6   Q5TW58   A0A232F0U3   A0A1S4EW38   A0A182Y6Y9   A0A1J1IZZ7   Q9W167   B4IHH0   A0A1W4WD03   A0A0M3QV70   B4H669   A0A0B4KG01   B3NQK1   B4QBZ8   A0A0J9RKD9   A0A3B0J2N9   B3MFS4   Q28WW1   B4J532   B4MP22   B4LKF0   B4KU94   A0A182QWR3   B4PBA5   A0A1A9XVY1   A0A336LML6   A0A1S4ET98   A0A2H8TIR6   A0A1I8NDV5   A0A1B0AP18   A0A1I8NMT7   J9K798   A0A2S2N9I4   A0A2H8TY23   A0A0L7KQX1   A0A026W1T7   A0A154P9A1   F4W9K8   A0A1A9Z7M8   T1GQF2   A0A0K2T3B4   A0A1B0FQF0   A0A1A9WXJ0   A0A2S2QQ03   A0A336LJ54   V3ZA87   A0A0N7ZLV3   A0A0N8ADV0   A0A0P5ZBE1   A0A0N8EE56   A0A0P6IKL3   A0A0P5C8L6   A0A0P6BTX4   A0A0N8A9W8   A0A0P5AQG2   A0A0P6EXA3  

Pubmed

28756777    26354079    30249741    20798317    23537049    17510324    + More
21347285    18054377    18025266    18316733    20068045    21843505    23604020    21282665    18362917    19820115    29403074    12364791    14747013    17210077    28648823    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17994087    22936249    15632085    17550304    25315136    26227816    24508170    21719571    23254933   

EMBL

KZ149950    PZC76674.1    NWSH01000992    PCG73194.1    ODYU01000984    SOQ36572.1    + More
KQ461195    KPJ06747.1    KQ459037    KPJ04308.1    QOIP01000002    RLU25462.1    GL438234    EFN69328.1    KZ288227    PBC31858.1    KQ981606    KYN39477.1    KB632401    ERL94923.1    KQ978339    KYM95020.1    CH477195    EAT48408.2    KQ978986    KYN26725.1    ADTU01000555    ADTU01000556    ADTU01000557    ADTU01000558    BK005874    DAA64511.1    KQ983128    KYQ47225.1    DS232723    EDS45164.1    KQ976423    KYM88880.1    GL762905    EFZ20502.1    KQ971312    KYB29340.1    NEVH01016289    PNF26315.1    KQ414845    KOC60261.1    PYGN01000678    PSN42341.1    AAAB01008816    EAL41534.3    NNAY01001309    OXU24406.1    CVRI01000065    CRL05781.1    AE013599    AAF47210.2    CH480838    EDW49194.1    CP012524    ALC41899.1    CH479213    EDW33293.1    AGB93699.1    CH954179    EDV57004.2    CM000362    EDX08553.1    CM002911    KMY96336.1    OUUW01000001    SPP73363.1    CH902619    EDV37764.2    CM000071    EAL26555.3    CH916367    EDW00658.1    CH963848    EDW73861.2    CH940648    EDW60671.2    CH933808    EDW09690.2    AXCN02001111    CM000158    EDW92537.2    UFQT01000020    SSX17879.1    GFXV01002218    MBW14023.1    JXJN01001112    JXJN01001113    JXJN01001114    JXJN01001115    ABLF02038332    ABLF02038339    ABLF02038341    ABLF02038345    GGMR01001208    MBY13827.1    GFXV01007005    MBW18810.1    JTDY01006817    KOB65672.1    KK107555    EZA49019.1    KQ434849    KZC08485.1    GL888033    EGI68994.1    CAQQ02016704    HACA01002726    CDW20087.1    CCAG010017087    GGMS01010604    MBY79807.1    SSX17880.1    KB202823    ESO87863.1    GDIP01232713    JAI90688.1    GDIP01157137    JAJ66265.1    GDIP01046312    JAM57403.1    GDIQ01035620    JAN59117.1    GDIQ01009530    JAN85207.1    GDIP01192472    GDIP01190122    LRGB01000915    JAJ33280.1    KZS15243.1    GDIP01009573    JAM94142.1    GDIP01168193    JAJ55209.1    GDIP01195514    JAJ27888.1    GDIQ01069261    JAN25476.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000279307    UP000000311    UP000005203    + More
UP000242457    UP000078541    UP000030742    UP000075903    UP000078542    UP000008820    UP000075900    UP000069272    UP000078492    UP000005205    UP000075809    UP000002320    UP000078540    UP000007266    UP000235965    UP000053825    UP000245037    UP000007062    UP000215335    UP000076408    UP000183832    UP000000803    UP000001292    UP000192221    UP000092553    UP000008744    UP000008711    UP000000304    UP000268350    UP000007801    UP000001819    UP000001070    UP000007798    UP000008792    UP000009192    UP000075886    UP000002282    UP000092443    UP000079169    UP000095301    UP000092460    UP000095300    UP000007819    UP000037510    UP000053097    UP000076502    UP000007755    UP000092445    UP000015102    UP000092444    UP000091820    UP000030746    UP000076858   

PRIDE

Q9W167   

Pfam

PF00001   7tm_1        + More
PF06585   JHBP
PF00160   Pro_isomerase

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR038606   To_sf       
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR036188   FAD/NAD-bd_sf       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR029000   Cyclophilin-like_dom_sf       

SUPFAM

SSF51905   SSF51905        + More
SSF50891   SSF50891       

Gene 3D

3.15.10.30     2.40.100.10    

ProteinModelPortal

A0A2W1BSQ1   A0A2A4JNN1   A0A2H1V842   A0A194QMJ0   A0A0N1IN82   A0A3L8DYU8   + More
E2AB52   A0A087ZU11   A0A2A3EJH9   A0A195FGW2   U4UQZ6   A0A182UZF6   A0A151I8Q5   Q17NZ0   A0A182RLK8   A0A182FLI2   A0A151JLT2   A0A158NY54   N1NV95   A0A151WHE7   B0XCW9   A0A195BS88   E9IFZ6   A0A139WMY1   A0A2J7QCM0   A0A0L7QP35   A0A2P8YDK6   Q5TW58   A0A232F0U3   A0A1S4EW38   A0A182Y6Y9   A0A1J1IZZ7   Q9W167   B4IHH0   A0A1W4WD03   A0A0M3QV70   B4H669   A0A0B4KG01   B3NQK1   B4QBZ8   A0A0J9RKD9   A0A3B0J2N9   B3MFS4   Q28WW1   B4J532   B4MP22   B4LKF0   B4KU94   A0A182QWR3   B4PBA5   A0A1A9XVY1   A0A336LML6   A0A1S4ET98   A0A2H8TIR6   A0A1I8NDV5   A0A1B0AP18   A0A1I8NMT7   J9K798   A0A2S2N9I4   A0A2H8TY23   A0A0L7KQX1   A0A026W1T7   A0A154P9A1   F4W9K8   A0A1A9Z7M8   T1GQF2   A0A0K2T3B4   A0A1B0FQF0   A0A1A9WXJ0   A0A2S2QQ03   A0A336LJ54   V3ZA87   A0A0N7ZLV3   A0A0N8ADV0   A0A0P5ZBE1   A0A0N8EE56   A0A0P6IKL3   A0A0P5C8L6   A0A0P6BTX4   A0A0N8A9W8   A0A0P5AQG2   A0A0P6EXA3  

PDB

6ME8     E-value=9.95111e-08,     Score=129

KEGG

101735978    no KO assigned | (RefSeq) trace amine-associated receptor 1

GO

GO:0004930   GO:0016021   GO:0007218   GO:0008528   GO:0005887   GO:0007186   GO:0003755   GO:0016075   GO:0003677   GO:0005524   GO:0016787   GO:0004713   GO:0016491   GO:0015930  

Length:

159

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

51.15487

Exp number, first 60 AAs:

20.26915

Total prob of N-in:

0.00313

POSSIBLE N-term signal

sequence

outside

1  -  41

TMhelix

42  -  64

inside

65  -  76

TMhelix

77  -  99

outside

100  -  159

 

 

Pi

267.523229

Theta

171.78263

Tajima's D

1.539171

CLR

0.521868

CSRT

0.791310434478276

Interpretation

Uncertain