SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13815
Pre Gene Modal
BGIBMGA011552
Annotation
juvenile_hormone_binding_protein_wdS3-0639_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.21
 

Sequence

CDS
ATGAAGAGAAAAGTTTGTGCGTTTTTCGCGTTCAGCAGTGTCGTGTCAATATTCGGAGCCTTACCTGATGTCCAGAAATGTAATCTGACCGATGCAGTATGCCTGAAGACGTCAGCGCAATCGATGGTGCCGCAGCTAACCGATGGATTACCGGATTTGGGGTCTAAGGTGTTAGATCCCCTTTACGTGGAAGCCATAAAAGTTGACCTTGCCGGATTGAAGTTGGCGCTTACTGATGCACAGATAACTGGAATGAAAGATACAATCATTGACAAATTGAGCGTGGATTTAGCAAAAAAACAGATACAAGTTATCTGTCACGTCAGTGTTTACTTGAAGGGTAAATATAAGGCTTCAGGGAAACTCCTCATTTTGCCCATCACAGGTGATGGGGACACAACTATTAAACTAAAGAATCTCAGGATCCAAATGATATACCCGTTCAACCTTGTTAAGAATTCGGAAGGAAAGGACGTTATCGACTTAAGCAGCTACAGATATAGCTATGACGTCAAAGACAACGCGCACTTTCATATGACGAATTTGTTTAATGGTAACAAACAATTAGGTGACGTGATGTTGACCTTTATGAATCAAAATTGGAAAGCGTTGACGCAGGAATTCGGAAAACCACTCCTCGAAATACCCATGGAGATGGTTTACAATACAGTCAAAACATATTTAAAATCTCAACCTTTAGAGGACATAGCTAATTTATAA
Protein
MKRKVCAFFAFSSVVSIFGALPDVQKCNLTDAVCLKTSAQSMVPQLTDGLPDLGSKVLDPLYVEAIKVDLAGLKLALTDAQITGMKDTIIDKLSVDLAKKQIQVICHVSVYLKGKYKASGKLLILPITGDGDTTIKLKNLRIQMIYPFNLVKNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLFNGNKQLGDVMLTFMNQNWKALTQEFGKPLLEIPMEMVYNTVKTYLKSQPLEDIANL

Summary

EMBL
AB196700    BAE43408.1    AB383144    BAH97100.1    BABH01015365    BABH01015366    + More
KT443975    ANC68523.1    MF196312    ATU07294.1    ODYU01001950    SOQ38859.1    ODYU01006397    SOQ48206.1    NWSH01000992    PCG73196.1    EZ407269    ACX53824.1    KZ149950    PZC76677.1    GCVX01000230    JAI18000.1    RSAL01000004    RVE54626.1    EU834740    ACF39401.1    PZC76676.1    RBVL01000123    RKO11885.1    AF117578    AAF16700.1    PCG73195.1    KQ459037    KPJ04307.1    RVE54627.1    AB196703    BAE43411.1    AB383142    BAH97098.1    ODYU01012978    SOQ59553.1    KQ461195    KPJ06746.1    EZ407156    ACX53718.1    BABH01015388    GCVX01000234    JAI17996.1    NWSH01000154    PCG78989.1    AGBW02008844    OWR52406.1    GCVX01000231    JAI17999.1    PZC76664.1    MF196307    ATU07289.1    AK401241    BAM17863.1    KQ459600    KPI94189.1    AGBW02009605    OWR50342.1    AK402095    BAM18717.1    KPJ06751.1    BABH01015382    KPJ06750.1    AGBW02008184    OWR54054.1    GCVX01000229    JAI18001.1    OWR50341.1    BABH01039669    BABH01039670    AB196702    AB383136    BAE43410.1    BAH97092.1    ODYU01002134    SOQ39241.1    PZC76666.1    MF196303    ATU07285.1    KT443978    ANC68526.1    PCG78990.1    EZ407196    ACX53757.1    ODYU01000574    SOQ35570.1    MF196302    ATU07284.1    ODYU01001173    SOQ37016.1    KZ149964    PZC76238.1    EZ407252    ACX53809.1    RVE54631.1    BABH01015389    BABH01015390    BABH01015391    AGBW02009765    OWR49975.1    AK401191    BAM17813.1    KPI94188.1    AK401870    KQ459595    BAM18492.1    KPI95934.1    RBVL01000182    RKO11020.1    ODYU01001389    SOQ37507.1    PCG78987.1    JTDY01004884    KOB67634.1    KP975118    ALT31637.1    JTDY01003861    KOB68908.1    KT443977    ANC68525.1    OWR54053.1    KPI95933.1    NWSH01001136    PCG72453.1    KX585302    ARO70195.1    NWSH01001221    PCG72068.1    AGBW02010413    OWR48563.1    GCVX01000232    JAI17998.1    KQ460313    KPJ16053.1    PZC76662.1    MF196305    ATU07287.1    AGBW02011789    OWR46125.1    MF196296    ATU07278.1    NWSH01001445    PCG71215.1    AK402595    BAM19217.1    ODYU01002699    SOQ40537.1    KX655906    AOG12855.1    MF196306    ATU07288.1    RSAL01000006    RVE54237.1    NEVH01011194    PNF31884.1    ODYU01004766    SOQ44995.1    KQ460202    KPJ17177.1    RBVL01000055    RKO12710.1    KQ459299    KPJ01910.1    GEBQ01028128    GEBQ01026980    GEBQ01025307    GEBQ01022449    JAT11849.1    JAT12997.1    JAT14670.1    JAT17528.1    RSAL01000069    RVE49225.1    GDQN01009976    JAT81078.1    PZC76239.1    RSAL01000076    RVE48836.1   
Pfam
PF06585   JHBP        + More
PF07648   Kazal_2
PF00050   Kazal_1
Interpro
IPR038606   To_sf        + More
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR002350   Kazal_dom       
IPR036058   Kazal_dom_sf       
SUPFAM
SSF100895   SSF100895       
Gene 3D
PDB
4G0S     E-value=1.95095e-53,     Score=526

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.953998
 
 
Length:
239
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.48200999999998
Exp number, first 60 AAs:
6.47581
Total prob of N-in:
0.41612
outside
1  -  239
 
 

Population Genetic Test Statistics

Pi
233.717725
Theta
183.047971
Tajima's D
1.392954
CLR
0.000002
CSRT
0.75971201439928
Interpretation
Uncertain
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