SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13812
Pre Gene Modal
BGIBMGA011550
Annotation
PREDICTED:_uncharacterized_protein_LOC106135995_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.445
 

Sequence

CDS
ATGTCGTACCTACGTTTTGTAGTAAGCGTTCTTGCAATGAACTATATATTTTTATGTGCCGGACAAAATTTATTAGAGAGAAGGCGTGAAGTAAGCACTACAACAACACCTATTCCCTTTCCGCCATGTCGGGCCGATGACATCGACTGCCTGCGGCGTGGTTTGAGAACATTCTTCAACCTCATGGATTCAGGTCATTACGGAATGACGCCCGTGGACCCGATTTACATAAACAGTGTCGCCATCGCGTTACCCGAGCAGCAACTATCCTTCTTATTGAGGAAAGTCATTGTTACCGGTATCAGTTGGACCAAACTGGTCGATAAAAGATTCCATGAAAACGGAATTAAAAATGGAGTACTCTTTAGTAGCGACTTGCATGTAACCGGAGATCTAGTCATGGCGAAAGCGGATATATACGAACCCTTATTCGCACATATGACCATGGACATCCAGGGTGTTCAAACTAACATAACGTATTCGTGGGATGTTGGAAAAAAAAAAGATAACGAGTATTACATTTCGTTGGGACAAGAGCGTATCGCAATCAGAAACGGACGTCTACCAACTTTCTTCCTTCAGCCAAGGGCATCAGCAGATACAAAAATCATAGATAAAACGTTGCAATTAAAGACTTCAATTGTAGACCACTTTTCGGAAGAAATAACTGCAGCAGCAATGCGGATTGTGATGGACAATATCCGACTATTTGCTCATACAGTACCAGTGAAATACTATTACAAACTCTTTTAA
Protein
MSYLRFVVSVLAMNYIFLCAGQNLLERRREVSTTTTPIPFPPCRADDIDCLRRGLRTFFNLMDSGHYGMTPVDPIYINSVAIALPEQQLSFLLRKVIVTGISWTKLVDKRFHENGIKNGVLFSSDLHVTGDLVMAKADIYEPLFAHMTMDIQGVQTNITYSWDVGKKKDNEYYISLGQERIAIRNGRLPTFFLQPRASADTKIIDKTLQLKTSIVDHFSEEITAAAMRIVMDNIRLFAHTVPVKYYYKLF

Summary

Pfam
PF06585   JHBP
Interpro
IPR038606   To_sf        + More
IPR010562   Haemolymph_juvenile_hormone-bd       
Gene 3D
PDB
3AOT     E-value=0.000696423,     Score=99

Ontologies

GO

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.782010
 
 
Length:
250
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.23124999999999
Exp number, first 60 AAs:
9.14643
Total prob of N-in:
0.28459
outside
1  -  250
 
 

Population Genetic Test Statistics

Pi
236.01474
Theta
185.999247
Tajima's D
1.135963
CLR
0.263132
CSRT
0.698465076746163
Interpretation
Uncertain
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