Silkworm Genome Informatics Database

Gene

KWMTBOMO13806

Pre Gene Modal

BGIBMGA009030

Annotation

PREDICTED:_uncharacterized_protein_LOC105842396_[Bombyx_mori]

Location

Bomo_Chr23(-):9688812-9690180 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.246 Mitochondrial Reliability : 1.024 Nuclear Reliability : 1.053

CDS

ATGCGCATCGTTAAATCGTCCAGTTTAAGTGCTGGAAATATCGCTGAGTTTAAGGAGCTCCTCCAGTCCTGTCATGAACGTATCGACGCGGTGGAAGCTCGAGTGCTTGGTCTTGAGGCTCGTCTAGCGGAGATCGTCTCAACAGTAGCAGCTTCTGACTTGGATTCCACTGAACTTCGCATGCAGCTGCGTGAACGCGACCAGGACTTGCTCAGGAATGATATTGACATCATTGGCTTGCCAATGATACCTCCCTAG

Protein

MRIVKSSSLSAGNIAEFKELLQSCHERIDAVEARVLGLEARLAEIVSTVAASDLDSTELRMQLRERDQDLLRNDIDIIGLPMIPP

Uniprot

H9JHN2 A0A0N0PFG8 A0A2A4KAI6 A0A0L7LCM2 A0A194QNP5 A0A2W1C270 + More
A0A2A4JGT4 A0A2A4ITG1 A0A2H1WQP2 A0A2H1WVR8 A0A2H1VU39 A0A251TW32 A0A2A4JD92

Pubmed

19121390 26354079 26227816 28756777 28538728

EMBL

BABH01012931 BABH01012932 LADJ01030744 KPJ21224.1 NWSH01000010 PCG80924.1 + More
JTDY01001653 KOB73242.1 KQ461191 KPJ07137.1 KZ149908 PZC78213.1 NWSH01001505 PCG71029.1 NWSH01008646 PCG62462.1 ODYU01010286 SOQ55282.1 ODYU01011375 SOQ57082.1 ODYU01004417 SOQ44266.1 CM007898 OTG15347.1 NWSH01001982 PCG69514.1

Proteomes

UP000005204 UP000053240 UP000218220 UP000037510 UP000215914

PRIDE

H9JHN2

Pfam

PF03258 Baculo_FP

Interpro

IPR019787   Znf_PHD-finger        + More
IPR013083   Znf_RING/FYVE/PHD
IPR001965   Znf_PHD
IPR011011   Znf_FYVE_PHD
IPR004244   Transposase_22
IPR019786   Zinc_finger_PHD-type_CS
IPR004941   Baculo_FP

SUPFAM

SSF57903 SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

H9JHN2 A0A0N0PFG8 A0A2A4KAI6 A0A0L7LCM2 A0A194QNP5 A0A2W1C270 + More
A0A2A4JGT4 A0A2A4ITG1 A0A2H1WQP2 A0A2H1WVR8 A0A2H1VU39 A0A251TW32 A0A2A4JD92

KEGG

105842396 no KO assigned | (RefSeq) uncharacterized LOC105842396

GO

GO:0046872

PANTHER

PTHR11505

Length:

85

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00055

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.27356

outside

1 - 85

Pi

127.138002

Theta

153.278768

Tajima's D

-0.525689

CLR

1.359894

CSRT

0.231338433078346

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree