SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13787  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011540
Annotation
PREDICTED:_uncharacterized_protein_LOC101746356_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.121
 

Sequence

CDS
ATGGCTTCTAGTGACCCTGAAATTAAAGATGGATTTACACTTCCTGTATGGATGAAGACAAAACCAACAAAAGAATTTGAACCGTTCGCCGGATCGCCGCCCCCACCGGAAGATTCATTCTTCTACATACGCTACCCTAAATCGGATATATTATTTGGTAAACCCACGAATAGTCAAGACGCGCTTGTGAACGAAACGAAGGAAGTGACCGCTGCCTCGGCATTCAACGTCGTCAAGGAGAAAGACTGGTCGAAACACACCAAGCCGTGCCAAGATGTGCTCCACGGCATCGCGCCAATCAACACCGCAGTGAACTCTGTTACGAAACCGAAGCCAGCCGGAACGGATGACGGCTTCAAAGGCGAAGGAGCGGCGTGTGGTACTTCTGTAGTGAAGGTCGCACATCAGATGATATCTTCTCGGTCTCCGCGCGGGTTCACGGTGGCGTCGCCGTCTGAGGACGCCACCGCTCCGGACCCTCAGCACTATAATCTGATGGCGCGTCGAGGCAGCAAGAGTCTCCCCGCCACGCCGGCACACTCGCCCCATTCCAGTCCCACCACCAGAAGGAAGAAGAATGGCAACCGTTACTTCACATCACCGTTCGAGCCAACAGAAGACCCGTCTAACCGATCGTGGTTGTCGATAGCTCTGCTTGGCTTCAAGAAGGAGCTTGCCACTTCAACTTCCACGTTAGCTGAAGAAGACTTGTTGGAACTGAGATCGCAAGCGGGCAGCTTGGCGGAGTCAGTGGAGAGCCTCGGTCCGGCTCCGAAGAACAAAGCACCCGAGAATCCCCACCAGCAGCACGCGTCTCCAACGAAAACAAAACCGAATCATTCCTTCCTCCCGAAACCATCTGAATTGCGCGAAATGAACTTCTGGTCGCCAACGTCAATGTGA
Protein
MASSDPEIKDGFTLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTNSQDALVNETKEVTAASAFNVVKEKDWSKHTKPCQDVLHGIAPINTAVNSVTKPKPAGTDDGFKGEGAACGTSVVKVAHQMISSRSPRGFTVASPSEDATAPDPQHYNLMARRGSKSLPATPAHSPHSSPTTRRKKNGNRYFTSPFEPTEDPSNRSWLSIALLGFKKELATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPNHSFLPKPSELREMNFWSPTSM

Summary

EMBL
GDQN01010150    GDQN01008948    JAT80904.1    JAT82106.1    KQ459037    KPJ04288.1    + More
KQ459833    KPJ19855.1    NWSH01000798    PCG74146.1    GAIX01007135    JAA85425.1    ODYU01004934    SOQ45318.1    KZ150207    PZC72239.1    GDQN01009094    GDQN01004145    JAT81960.1    JAT86909.1    RSAL01000242    RVE43628.1    AGBW02008614    OWR52913.1    JTDY01008820    KOB64380.1    KQ971312    EEZ98200.1    GDAI01001376    JAI16227.1    GEZM01052498    JAV74477.1    AJWK01014748    GALX01004326    JAB64140.1    LBMM01006599    KMQ90473.1    GL437663    EFN70121.1    GFDF01009723    JAV04361.1    KQ982169    KYQ59536.1    KQ981727    KYN36649.1    KQ977991    KYM98281.1    GL449462    EFN82658.1    KQ981064    KYN09882.1    GEZM01052499    JAV74476.1    KQ976428    KYM87827.1    ADTU01009726    KK107260    QOIP01000001    EZA54006.1    RLU26448.1    KK852962    KDR13202.1    JR039306    AEY58629.1    GGMS01012648    MBY81851.1    KQ434803    KZC06009.1    GECU01021537    JAS86169.1    GGMR01014444    MBY27063.1    GL888344    EGI62401.1    GEDC01028566    JAS08732.1    AJVK01018926    AJVK01018927    AJVK01018928    KQ414940    KOC59136.1    PYGN01000583    PSN43825.1    GEBQ01031849    JAT08128.1    AK417417    BAN20632.1    GECZ01017701    GECZ01017148    JAS52068.1    JAS52621.1    ABLF02010726    ABLF02010728    DS235845    EEB18370.1    KB631924    ERL87218.1    KZ288422    PBC25976.1    GECZ01006894    JAS62875.1    GECZ01025071    GECZ01002491    GECZ01000849    JAS44698.1    JAS67278.1    JAS68920.1    AAZX01011597    AAZX01013086    NNAY01000159    OXU30443.1    KK855095    PTY20796.1    KQ435710    KOX79739.1    KQ780658    OAD51919.1    GFTR01004739    JAW11687.1    APGK01055063    APGK01055064    KB741259    ENN71703.1    ERL87219.1    GECL01002642    JAP03482.1    GBBI01001542    JAC17170.1    AK339808    BAH70523.1    GEBQ01025759    JAT14218.1    GECZ01018297    GECZ01015110    GECZ01000965    JAS51472.1    JAS54659.1    JAS68804.1    GECZ01019383    GECZ01017000    JAS50386.1    JAS52769.1    GDKW01000005    JAI56590.1    ACPB03021640    GAHY01000573    JAA76937.1    UFQT01000827    SSX27421.1    UFQT01002674    SSX33905.1    GBHO01035156    GBHO01035155    GDHC01013332    GDHC01000931    JAG08448.1    JAG08449.1    JAQ05297.1    JAQ17698.1   
Pfam
PF11018   Cuticle_3
Interpro
IPR022727   Cuticle_C1       

Ontologies

Topology

Length:
300
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02439
outside
1  -  300
 
 

Population Genetic Test Statistics

Pi
277.548135
Theta
186.63499
Tajima's D
1.309223
CLR
0.116355
CSRT
0.742462876856157
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 NIYVIAVQGIK 100.00 1e-04
26280517 YFIESNDKIR 100.00 3e-04
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