Gene

KWMTBOMO13786

Pre Gene Modal

BGIBMGA011473

Annotation

PREDICTED:_HIG1_domain_family_member_2A?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr23(-):9070565-9072042      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.942

CDS

ATGTCAACTGAACCAGAACCAACGGATTTACATTGGGTGCAACTGCGCAAGGAAATGGGAGCATCTCACCATGTAGAAACGACAAGAGAAAAATTTCATAGAAAATTTACAGAGAATCCGTTTGTTCCTCTAGGTTGTTTAGCAACAGCTGGAGCTTTATCCATGGGTCTTTGGAGTTTTAGAACTGGAAAGACAAGACTCTCTCAGCAAATGATGAGAGTGAGAATTCTTGCACAAGGGCTTACCATTGCTGCTTTAGTTATTGGTGTAGTAATCACCACAGGAAAATCTTCAAAATAA

Protein

MSTEPEPTDLHWVQLRKEMGASHHVETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTRLSQQMMRVRILAQGLTIAALVIGVVITTGKSSK

Uniprot

H9JPL8   A0A2A4JRP9   A0A2H1VMD5   A0A2W1BB12   A0A194RR32   A0A0N1IAE6   + More
I4DLC6   S4PWU8   A0A212FGQ1   A0A0L7KVE3   A0A0K8TP00   Q29GJ2   B4H109   A0A3B0KZK6   B4NCL9   A0A1B0CUV4   A0A1B0AE92   B4L861   A0A1A9ULB3   A0A1B0EUC2   A0A1B0DR83   A0A1A9XWW8   A0A1B0APJ2   A0A1W4WDK8   B4PXR9   A0A336LYT3   A0A2P8Y9G4   W8BVF5   V5GEG7   Q9VXH4   B4R5T0   B4IF62   A0A0M4ELB0   B4M291   A0A0L0BNR6   A0A1J1IVD2   A0A0K8VAQ7   A0A1W4XTN3   B4JJC5   A0A1W4XIM3   A0A034V133   B3N0S9   A0A0A1WHR7   A0A1A9W628   B3NX53   A0A084WFI7   A0A2J7QCI7   A0A0P5MV56   A0A0N7ZWX9   A0A0P5FLQ1   A0A0P6E1C1   A0A1L8DZU5   A0A0P5EQS6   A0A0P5TZ81   B0WM78   A0A0P6BQ06   A0A182N157   A0A1I8P107   A0A182T5M8   A0A023ED10   A0A023ED43   A0A182KBJ7   A0A182PFX1   A0A023EEP2   A0A1I8MPR8   A0A182RPH5   A0A182H4T4   T1DMZ5   A0A182LTA7   A0A023EEZ9   A0A182QB37   A0A182W4H1   A0A182Y7Q7   A0A182UHI2   A0A182XDY5   A0A182L835   Q7PRX7   A0A182HGN6   A0A182UUH7   E9HGD9   A0A1Q3FIB8   A0A2K6VAZ8   A0A2M4C433   A0A2M3Z821   A0A2M3Z843   A0A182FJK7   Q17CX4   A0A067QT97   A0A1L8EE60   A0A2M4AH61   A0A3R7P4R5   A0A182IX28   A0A2M4AH80   T1GWP0   A0A1Y1JYK0   A0A0P4W2P7   D6WZM3   A0A0P5K073   Q66GV5   Q63ZJ7  

Pubmed

19121390    28756777    26354079    22651552    23622113    22118469    + More
26227816    26369729    15632085    17994087    17550304    29403074    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    25348373    25830018    24438588    24945155    25315136    26483478    25244985    20966253    12364791    14747013    17210077    21292972    20920257    17510324    24845553    28004739    18362917    19820115    27762356   

EMBL

BABH01015268    NWSH01000798    PCG74143.1    ODYU01003335    SOQ41956.1    KZ150207    + More
PZC72238.1    KQ459833    KPJ19854.1    KQ459037    KPJ04287.1    AK402094    BAM18716.1    GAIX01006163    JAA86397.1    AGBW02008614    OWR52912.1    JTDY01005425    KOB67009.1    GDAI01001710    JAI15893.1    CH379064    EAL32117.2    CH479201    EDW29925.1    OUUW01000021    SPP89518.1    CH964239    EDW82578.1    AJWK01029687    AJWK01029688    CH933814    EDW05636.1    CCAG010006961    AJVK01008965    JXJN01001455    CM000162    EDX01905.1    UFQS01000175    UFQS01000297    UFQT01000175    UFQT01000297    SSX00754.1    SSX22960.1    PYGN01000781    PSN40888.1    GAMC01001245    JAC05311.1    GALX01006067    JAB62399.1    AY071104    AE014298    AAL48726.1    AGB95451.1    CM000366    EDX18080.1    CH480832    EDW46116.1    CP012528    ALC48184.1    CH940651    EDW65795.1    JRES01001597    KNC21603.1    CVRI01000061    CRL04056.1    GDHF01016393    JAI35921.1    CH916370    EDV99677.1    GAKP01023448    JAC35510.1    CH902644    EDV34808.1    GBXI01015895    JAC98396.1    CH954180    EDV46882.1    ATLV01023354    KE525342    KFB48981.1    NEVH01016289    PNF26301.1    GDIQ01170138    GDIQ01150749    GDIQ01134953    GDIQ01086970    GDIQ01051986    LRGB01002793    JAL00977.1    KZS06324.1    GDIP01204505    JAJ18897.1    GDIQ01255204    GDIQ01219624    GDIQ01169186    GDIQ01073874    JAJ96520.1    GDIQ01073873    JAN20864.1    GFDF01002071    JAV12013.1    GDIQ01269170    JAJ82554.1    GDIP01120003    JAL83711.1    DS231995    EDS30912.1    GDIP01011502    JAM92213.1    GAPW01006295    JAC07303.1    GAPW01006286    JAC07312.1    GAPW01006287    JAC07311.1    JXUM01110173    KQ565387    KXJ71035.1    GAMD01003305    JAA98285.1    AXCM01004295    GAPW01006288    JAC07310.1    AXCN02002162    AAAB01008846    EAA06427.4    APCN01005687    GL732640    EFX69210.1    GFDL01007783    JAV27262.1    GGFL01004635    MBW68813.1    GGFJ01010936    MBW60077.1    GGFM01003925    MBW24676.1    GGFM01003936    MBW24687.1    CH477303    EAT44199.1    KK852962    KDR13209.1    GFDG01001797    JAV17002.1    GGFK01006802    MBW40123.1    QCYY01001783    ROT75356.1    GGFK01006825    MBW40146.1    CAQQ02161661    CAQQ02161662    GEZM01097425    JAV54213.1    GDRN01077398    JAI62746.1    KQ971372    EFA09681.1    GDIQ01217324    JAK34401.1    BC082210    CM004471    AAH82210.1    OCT87654.1    BC082915    CM004470    AAH82915.1    OCT88699.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000001819    UP000008744    UP000268350    UP000007798    UP000092461    UP000092445    UP000009192    UP000078200    UP000092444    UP000092462    UP000092443    UP000092460    UP000192221    UP000002282    UP000245037    UP000000803    UP000000304    UP000001292    UP000092553    UP000008792    UP000037069    UP000183832    UP000192223    UP000001070    UP000007801    UP000091820    UP000008711    UP000030765    UP000235965    UP000076858    UP000002320    UP000075884    UP000095300    UP000075901    UP000075881    UP000075885    UP000095301    UP000075900    UP000069940    UP000249989    UP000075883    UP000075886    UP000075920    UP000076408    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075903    UP000000305    UP000069272    UP000008820    UP000027135    UP000283509    UP000075880    UP000015102    UP000007266    UP000186698   

PRIDE

H9JPL8    Q9VXH4   

Pfam

PF04588   HIG_1_N

Interpro

IPR007667   Hypoxia_induced_domain       

ProteinModelPortal

H9JPL8   A0A2A4JRP9   A0A2H1VMD5   A0A2W1BB12   A0A194RR32   A0A0N1IAE6   + More
I4DLC6   S4PWU8   A0A212FGQ1   A0A0L7KVE3   A0A0K8TP00   Q29GJ2   B4H109   A0A3B0KZK6   B4NCL9   A0A1B0CUV4   A0A1B0AE92   B4L861   A0A1A9ULB3   A0A1B0EUC2   A0A1B0DR83   A0A1A9XWW8   A0A1B0APJ2   A0A1W4WDK8   B4PXR9   A0A336LYT3   A0A2P8Y9G4   W8BVF5   V5GEG7   Q9VXH4   B4R5T0   B4IF62   A0A0M4ELB0   B4M291   A0A0L0BNR6   A0A1J1IVD2   A0A0K8VAQ7   A0A1W4XTN3   B4JJC5   A0A1W4XIM3   A0A034V133   B3N0S9   A0A0A1WHR7   A0A1A9W628   B3NX53   A0A084WFI7   A0A2J7QCI7   A0A0P5MV56   A0A0N7ZWX9   A0A0P5FLQ1   A0A0P6E1C1   A0A1L8DZU5   A0A0P5EQS6   A0A0P5TZ81   B0WM78   A0A0P6BQ06   A0A182N157   A0A1I8P107   A0A182T5M8   A0A023ED10   A0A023ED43   A0A182KBJ7   A0A182PFX1   A0A023EEP2   A0A1I8MPR8   A0A182RPH5   A0A182H4T4   T1DMZ5   A0A182LTA7   A0A023EEZ9   A0A182QB37   A0A182W4H1   A0A182Y7Q7   A0A182UHI2   A0A182XDY5   A0A182L835   Q7PRX7   A0A182HGN6   A0A182UUH7   E9HGD9   A0A1Q3FIB8   A0A2K6VAZ8   A0A2M4C433   A0A2M3Z821   A0A2M3Z843   A0A182FJK7   Q17CX4   A0A067QT97   A0A1L8EE60   A0A2M4AH61   A0A3R7P4R5   A0A182IX28   A0A2M4AH80   T1GWP0   A0A1Y1JYK0   A0A0P4W2P7   D6WZM3   A0A0P5K073   Q66GV5   Q63ZJ7  

PDB

2LOM     E-value=1.78402e-05,     Score=108

KEGG

101746217    no KO assigned | (RefSeq) HIG1 domain family member 2A, mitochondrial

GO

GO:0016021  

Length:

99

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.18931

Exp number, first 60 AAs:

20.11713

Total prob of N-in:

0.02711

POSSIBLE N-term signal

sequence

outside

1  -  40

TMhelix

41  -  60

inside

61  -  72

TMhelix

73  -  95

outside

96  -  99

 

 

Pi

236.107556

Theta

171.110528

Tajima's D

1.212054

CLR

0

CSRT

0.722113894305285

Interpretation

Uncertain