SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13781  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011537
Annotation
PREDICTED:_UPF0668_protein_C10orf76_homolog_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 3.085
 

Sequence

CDS
ATGGCGATGAGAAAAAGAAGTGGCTCTGGATCAAAGAGACACTTAAAAGAGAAGGTTGTACAAATTTATGAATCGTTCTTTCGAGGAGAGGACTTAACGACTGATAACCCTACTTTTTGGGATGAATTCTTTCTTCTGAAGCCAAAAATACCACAGCTGGAAGCAGAAATACACAAACTGTCCACAGAACAGCTGATAAACATGAAAGAAAGTATGAATATATTGGTTGAACAGTGTATAGAAATGTTGAGACAAGACCATCATATAAGGTTGCTTTATGCTTTACAAACATTAAGTGCATTACTCATTACTATGTATCAAAGACTTGAACAGGATTCAAACATAAACATCAAAACTATAATGATTGGGCAAGAGAATGCTGATACTAAAATGGTGAAATTATTTGAACAATGCAGTATTATACTATCAGGTGATGTTCATGAGAGCTTAAAGTCAATGGTTCTGAAGCTCTTGCTTATTATAGCAACTGGAATAGAAAATATAGATGAGAATCCTTTTGTGGAGTATTTCATGTCAAACTGTTTGTTTGAGCCATTGATACAGCTGCTTTGTACCACTACAGAAAGGCAACAGCATGGTTATGATGTAGTTATGTTACTGATGTTTTTGATAAACTATAAGAAGCATGAATCAACAAATCCATATGTTGTTAAACTTTCTATATTAGATGATGAGCTGGCTTTGAACGGCTATGGCCAAGTAATAACGACAGCTTTGAATGACTATGTAATGTCAGCATTCGGTGGTATGCAAGGCAACGGGGGTGGAGGTGGTTGGTTGTCATCTCTAACTAGCATGGTTGGGGGTATATTCCTAACAAATGATGAACAACAACCTTTAGCCAGGGGACAAAGGAACAATGGGGCCGAAGAAGGAATGCTCCTGGCTATGTATGAGGCTTCGCATTTAAATCGGAATTTTATGACGACTTTGGCACATTCGTCTTCAACGACGGCGTCGTCAGCGCCACCATCGCCCCCAGCGACGTTACCGCCTCACCAGAGTCCACCGAACCTCGCTCAAATACAAGCCCTGGACAATGATCAACCAACGAATTTACTAGTCACATTCTTTCAGTATTGTTCAATCATAATGGCGGACACCAGGAGCGAAAGTAGTATTAACAAGTGCAGTCTTTGTTTTATCACTTTAACGTGCATCGTGGAGGACCAATTTGCTAATTCAATTATGCACGACCAAAACCTCACTTTTAAGGTACAATTATATAGACTTCCGATGCGTCATAGGAAAATAGTTCTTGAGGAACCACCGTCACAACCGTTGGCGTCTACTTTAATAGATCTTTTAGTCGAGTTCATAATGTGTCACCTGCTGAAGAAGTTCCCCGGCGAGCTGTATAGCCTGTGCGTGGGCGTGCTCCTCCGGCTACTGAGCTACCAGAAGCGGTGCAAGGTTCGTCTGGCGCGAGACTGGCGACCTCTGTGGGCCGCACTCATAGCGCTGCTCAAGTTCTTGGTCACCAATGAAACCGCGTTACTGAAGCGACACAATATCTTCATAATGGCGCAACAGGTGGTGAACATTTTCAACTTATTTATAACATTGGGCGACACGTTCCTACCCACTCCGGCATCGTACGATCAATTATACTACGAGCTAATTAGAATGCATCAAGTTTTCGATAATCTATTTTATATGGCTCTGCGGTACTCCACCGGCGACGGCGAATATAAAGCCGAAGCGTTGCGACTGGCCAATTGCTTAGTGAACGTGCGCGCCATCATCCAGCACTTCTCCGTGAAGATAGAAGCGTGGCTCGACCAACAGAATCTGTCGACTCCCTCCGAGGAGCAGATACTGGAAGTGGTACGCAAGAACTACGACAGCCTGATACTGAAGCTACAGAAGGGACTCGAGAGCTATGAACGCTATTCGGAGCAAGAGCACTGGCCGCTGCTGGCGAGGACGGTGCGGGCGGCGCGGAGGAGGGGGGACGCCAGCGCGCTGCAGCAGCACTCCGCCGCCGCGCTCCACCACTACACTGCCGCCCCGTGA
Protein
MAMRKRSGSGSKRHLKEKVVQIYESFFRGEDLTTDNPTFWDEFFLLKPKIPQLEAEIHKLSTEQLINMKESMNILVEQCIEMLRQDHHIRLLYALQTLSALLITMYQRLEQDSNINIKTIMIGQENADTKMVKLFEQCSIILSGDVHESLKSMVLKLLLIIATGIENIDENPFVEYFMSNCLFEPLIQLLCTTTERQQHGYDVVMLLMFLINYKKHESTNPYVVKLSILDDELALNGYGQVITTALNDYVMSAFGGMQGNGGGGGWLSSLTSMVGGIFLTNDEQQPLARGQRNNGAEEGMLLAMYEASHLNRNFMTTLAHSSSTTASSAPPSPPATLPPHQSPPNLAQIQALDNDQPTNLLVTFFQYCSIIMADTRSESSINKCSLCFITLTCIVEDQFANSIMHDQNLTFKVQLYRLPMRHRKIVLEEPPSQPLASTLIDLLVEFIMCHLLKKFPGELYSLCVGVLLRLLSYQKRCKVRLARDWRPLWAALIALLKFLVTNETALLKRHNIFIMAQQVVNIFNLFITLGDTFLPTPASYDQLYYELIRMHQVFDNLFYMALRYSTGDGEYKAEALRLANCLVNVRAIIQHFSVKIEAWLDQQNLSTPSEEQILEVVRKNYDSLILKLQKGLESYERYSEQEHWPLLARTVRAARRRGDASALQQHSAAALHHYTAAP

Summary

EMBL
NWSH01000798    PCG74139.1    ODYU01003335    SOQ41952.1    GDQN01003431    JAT87623.1    + More
KQ459037    KPJ04282.1    KQ459833    KPJ19848.1    KK853137    KDR10796.1    NEVH01027073    PNF13863.1    GECZ01018808    JAS50961.1    GEZM01006882    JAV95603.1    DS234988    EEB09904.1    GBBI01003373    JAC15339.1    KQ434948    KZC12436.1    GL448921    EFN83594.1    KK107796    QOIP01000013    EZA47686.1    RLU15185.1    KQ978220    KYM96363.1    GDHC01014773    GDHC01010398    JAQ03856.1    JAQ08231.1    GL888217    EGI64628.1    KQ981264    KYN43961.1    KQ976528    KYM81914.1    ADTU01001412    KQ980989    KYN10662.1    KB631815    ERL86513.1    GL732651    EFX68666.1    GDIP01189026    JAJ34376.1    GDIP01189027    JAJ34375.1    GDIP01227622    JAI95779.1    GDIP01141596    GDIP01105035    LRGB01000491    JAL98679.1    KZS18963.1    GDIP01071144    JAM32571.1    GDIP01121131    JAL82583.1    GDIP01058849    JAM44866.1    GDIP01102190    JAM01525.1    GDIP01254365    GDIQ01052560    JAI69036.1    JAN42177.1    GDIQ01125925    JAL25801.1    JXJN01026043    GECL01000955    JAP05169.1    KQ971379    EEZ97362.1    GDIP01079581    JAM24134.1    GDIP01022662    JAM81053.1    CCAG010016541    GFDF01009868    JAV04216.1    GDRN01094585    GDRN01094584    JAI59702.1    PNF13866.1    CH964232    EDW81264.1    CM000160    KRK03201.1    AE014297    AY069483    AAF54299.2    AAL39628.1    AMQN01007821    KB301483    ELU05457.1    CH940650    EDW66787.1    CH933806    EDW15570.1    OUUW01000008    SPP84423.1    CH954181    EDV49856.1    EDW96585.1    CM000070    EAL28657.2    BT128739    AAS65128.1    AEH59642.1    ACPB03015959    CH480815    EDW42957.1    CH479182    EDW34491.1    GDHF01007130    JAI45184.1    GAMC01016486    JAB90069.1    CH916373    EDV95076.1    GDAI01000967    JAI16636.1    GBXI01002686    JAD11606.1    KA648377    AFP63006.1    GAKP01001608    JAC57344.1    NEDP02005569    OWF38357.1    CP012526    ALC45859.1    DS469512    EDO48716.1    GFAC01003360    JAT95828.1    HACG01025449    CEK72314.1    GDIP01075782    JAM27933.1    CM000364    EDX13703.1    CH902617    EDV41876.1    GFPF01001231    MAA12377.1    GEDV01009064    JAP79493.1    GEFH01004932    JAP63649.1    GADI01003433    JAA70375.1    GACK01006828    JAA58206.1    GFAA01000606    JAU02829.1    GBBK01002159    JAC22323.1    KQ421523    KOF77226.1    CH477803    EAT36060.1    JO844042    AEO35659.1    GFTR01007323    JAW09103.1    GEDC01030234    JAS07064.1    GAPW01000422    JAC13176.1    GACK01010002    JAA55032.1    KQ414581    KOC71017.1    ABJB010022857    ABJB010087777    ABJB010112357    ABJB010217244    ABJB010218823    ABJB010258738    ABJB010472833    ABJB010578851    ABJB010685015    ABJB011006260    DS737809    EEC07322.1    CM004478    OCT71693.1   
Pfam
PF08427   DUF1741
Interpro
IPR039868   ARMD3-like        + More
IPR013636   DUF1741       
IPR016024   ARM-type_fold       
SUPFAM
SSF48371   SSF48371       

Ontologies

Topology

Length:
678
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.96595
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07738
outside
1  -  678
 
 

Population Genetic Test Statistics

Pi
243.140856
Theta
185.321157
Tajima's D
1.098472
CLR
0.352632
CSRT
0.689465526723664
Interpretation
Uncertain
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