Silkworm Genome Informatics Database

Gene

KWMTBOMO13780

Pre Gene Modal

BGIBMGA011476

Annotation

PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr23(-):9009054-9020472 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.338

CDS

ATGAAATCTAAAAAAAAACAACATACTTCTTCTGAAGAATCTGAGGACACTAACGATAGTGCAAGAAGCAGCTCGTCCGAGAGTGATAGCGAGGTATCTTCAGCTTCTGAACATCGACACAAGAAAAAAAGAAAACGTGATTCATCTTATTCAGAGACAGAGTCTGATGATCAAAAACGTTCTAAAAAGCGCAAACATAAAAAAAAGAAAAAGAAACATGGGAAAAAGAAGCGCCGATCGGGTTCTGACGTTAAACCTGACGAATTTATACTGAGCGAAGGCGAAGAAACATCTAAAAAGAAACGAAAACACAAACATAAACATGTTAAACGTGCCCGAAGTTCCTCAGCTAGTGAAATAGCAGAAGTAGAAAAGAGTCAGCGTCGCTTGCACAGCGTCGTGAAGGAACGTCGGGATTCATTAGAAGAAGTGCAGCCAACCCGAACTTATTATCAGAGGGAATTTAGACGCTCTCAATCTGCAGACAATGCAAGAGAAAGAGAAGTTCAAAGGTTCTATAGAGGTTCTAGCAAGGAACGAAGGCAATATCAGGAGCAATATGATCAAGAACACGAAAGATTTGCTTCATATCACCATGAACACTTTGACAATAAACATAAGTACAATCAAACTTCACAATACAATCAATTTAATGATAGTGGTGGAAGACAAAGAAATTTCAATCAATTTAAAAGGAATCAAAGATATGAAGATTATCGTCGTCCTGATGATGGCTATCAAATGAAACCCAGAGATGAAGTGTACCATTCTAAACCTGACCCAAGGGGTTACGACAATAACCGATATGAGCAATACGGTGAGAGAAATATAAAGAGACGCGATTATGAAGAAAGCGAAGATTACAAGGATCGTCGTGGGCATCCTGAGAATGAGCGTTACCATGCACCGCCACGCGACTACCAGGACAAGCGCGAGTTTCCAGATAAACGTCAGTTCCCAGACAAGCGTCAGTTTCCGGACAAGCGCCAGTTTCCAGACAAAAGAGAATTTCCAGACAAGAGAGAGTTTCCGAACAAGCGCGAGTTTCCAGTCAAGAGTGAGAAATTCCGTGAAGAACCGTACCCGTTAGAAAGGAGTCGGGAGCCGCGTCGAGATAAGCTACTGCCCAGAGTTGAGAGACCTCCATTGCCTCCACACAGGGAGCGTTCGAGATCCCGCAGTTTCGAGGAGCGGCCCAGGGATCGCAACAGACGGCCGGAGCCCAGGGACGAGCCCCGGGACGACGAGGCCTACCGCCGCGCTCCCGACCCGCGCCGGGACCGACCCCGCCCCGATGAACCTCGACCCGACAAACCTCAACCCAGGCCCAGGGAGAGGAAGTCAAGGTTCGCTGACGCCGAAGACAATAAAGAATACAACTGGGGTAAGACGGAAGTGAAGAAGGAAGACGCGAAGAATCCGAATGAAAAGGACAAGCCGAACTTTGGTCTCTCCGGTAAATTGACAGCCGACGCTAACACTGTCAACGGTGTTGTCATCAAATATACGGAACCCGATGATGCTAAACAACCCAAAAGAAGATGGAGATTCTACCCGTTCAAAGGTGACAAAGCGTTGCCCATATTGTATATACATCGGCAATCGGCGTTCTTGATCGGGCGCGACAAGAAAGTGGTAGATATCGCGCTGGAGCATCCCTCCATCAGCAAGCAGCACGCCGCCCTGCAGTACCGCGCCACGCCCTTCACCAGAGCTGACGGCTCGCAGGGACGCAGAGTCAGACCTTACGTCATTGATCTTGATTCGGCCAACGGTACATTCGTGAACAACAAGAAGATCGAGCCGCGTCGCTACGTGGAGCTTCTGGAGCGCGATGTCGTGAAGTTCGGCTTCTCGCAGCGGGAGTACGTGCTGCTGCACGAGAACAGCAAGGACGACGCGCAGGACGACGACCAGCTCGAGCCCGCGCTCGCCACCGCCGACCACATCAAGCACGAGAAGCGACTCAAGCAGGAGGTCGTCGAGGACGGCGAGTGA

Protein

MKSKKKQHTSSEESEDTNDSARSSSSESDSEVSSASEHRHKKKRKRDSSYSETESDDQKRSKKRKHKKKKKKHGKKKRRSGSDVKPDEFILSEGEETSKKKRKHKHKHVKRARSSSASEIAEVEKSQRRLHSVVKERRDSLEEVQPTRTYYQREFRRSQSADNAREREVQRFYRGSSKERRQYQEQYDQEHERFASYHHEHFDNKHKYNQTSQYNQFNDSGGRQRNFNQFKRNQRYEDYRRPDDGYQMKPRDEVYHSKPDPRGYDNNRYEQYGERNIKRRDYEESEDYKDRRGHPENERYHAPPRDYQDKREFPDKRQFPDKRQFPDKRQFPDKREFPDKREFPNKREFPVKSEKFREEPYPLERSREPRRDKLLPRVERPPLPPHRERSRSRSFEERPRDRNRRPEPRDEPRDDEAYRRAPDPRRDRPRPDEPRPDKPQPRPRERKSRFADAEDNKEYNWGKTEVKKEDAKNPNEKDKPNFGLSGKLTADANTVNGVVIKYTEPDDAKQPKRRWRFYPFKGDKALPILYIHRQSAFLIGRDKKVVDIALEHPSISKQHAALQYRATPFTRADGSQGRRVRPYVIDLDSANGTFVNNKKIEPRRYVELLERDVVKFGFSQREYVLLHENSKDDAQDDDQLEPALATADHIKHEKRLKQEVVEDGE

Uniprot

NA

ProteinModelPortal

NA

PDB

6FF7 E-value=3.01312e-43, Score=443

KEGG

101745404 K13108 smad nuclear-interacting protein 1 | (RefSeq) smad nuclear-interacting protein 1

GO

GO:0005515 GO:0004672 GO:0006468 GO:0005524 GO:0004714 GO:0007169 GO:0016020 GO:0004713 GO:0016491 GO:0015930

Length:

665

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00303

outside

1 - 665

Pi

215.010983

Theta

18.631268

Tajima's D

1.071541

CLR

0.640465

CSRT

0.686665666716664

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics