SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13776
Annotation
PREDICTED:_uncharacterized_protein_LOC105842489_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.419
 

Sequence

CDS
ATGCCAATTGTAACGTGCGAGATATGTGGACTGAGAACAAGTCGGGTGGATAACAAAAAACGAACATTTATGGCTCAATTTCCACTGGATGAAGATCGGTGCAAACAATGGGTAAAAATAACAGGTAAAGAAGACTTGGCCTATGTGCCTATAGAAAAATTGCACCAATTGAAACATATTTGTGGAAAGCATTTTCGACCTAAGGATTTTAAAAAGAAAAGGACACAACTTAGAAGAAATGCTGTTCCATGTATCGAAATTACGGCTGAGCCCCTGAGCGATGAAATATTGAGTGATTTCCCACTCCATTTACCTAAAAAAGCTGTAGAAGACCAACACCTACAGTTTGATGCCACCAATCCTTCAATACCGCAATGTTCAAAAGACTTTTTTGCATGCATAGTACAAGAACACAATTATTGTAAGCATAATGATACAGGTAAGAATTTTTTTGTCAGCATACTGGAGTAA
Protein
MPIVTCEICGLRTSRVDNKKRTFMAQFPLDEDRCKQWVKITGKEDLAYVPIEKLHQLKHICGKHFRPKDFKKKRTQLRRNAVPCIEITAEPLSDEILSDFPLHLPKKAVEDQHLQFDATNPSIPQCSKDFFACIVQEHNYCKHNDTGKNFFVSILE

Summary

Pfam
PF05485   THAP        + More
PF12017   Tnp_P_element
Interpro
IPR006612   THAP_Znf        + More
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
Gene 3D

Ontologies

Topology

Length:
156
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10027
outside
1  -  156
 
 

Population Genetic Test Statistics

Pi
174.066955
Theta
168.233722
Tajima's D
-0.131977
CLR
0.088974
CSRT
0.337033148342583
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号