SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13775
Annotation
PREDICTED:_uncharacterized_protein_LOC105391175_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 3.8
 

Sequence

CDS
ATGGATCCAGGAATATATCCAGCTGTGATTTCTTATTTAAAAAAAGAAGGCGAAAAAATGTCTGAAAAAAATAAGTTGTGTGTTGCTATGTTCGACGAAATAGCGTTGAAGAAGAGATTAATCTACAGTGCTAGTTCTGATATAGTTGAGGGCTATGTTGATTTTGGAATGGAAGAAGGCAGAACTGGAGAAATGGCAGATCACGCGCTAGTTTTTATGCTGCAAGGCTTACACAAAAAATTTAAACAGCCGATTGCGCATTACTTTGTCAAGGGCACAATTTCAACACAAAAATTGGTTGTAAAAAATGTTATAAAAACTGTAAGAGATGTTGGATATACTGTAGTAGCGACGAGTATATGGGTGTTTGTAGAGAGCAAACATTTCAAATATTTAAATCTGAGACAACTCAATCAGGATTCCCTGGAAAATTTGTTCGGAGCTATTAGGCAACACAGCCCAACAAATAGAAACCCCACCTGTCATCATTTCCAAGCAGCCTTAAAGTCGTCAGTTCTAACTCGCCTGAGTGTACCCCGAAGCAGAGGAACAAACTGTGAAAGCGATGATGGTGAAATATTGTTCGATTTTCACGACATAGTATTTGATAAAAAAAACACAGAGGAAAAGAAATCTTGTGGCGAAAATCTGCTACTTCCAGGTACCCATCGAAAGGAACCTTCGGTGTCTTCAAATGAAGGTGTGCTTGCTTCATGTACCCCTAGAAATGATAATTTCTCAACCTCAGATGAAAATTTGCCACTGTTGCATTTAGACGATACAGATGACTATGATGAGACAGAATCTGACAAGCAATTGGAAGAACTGTATAAAATGTTTGACAAGCAGCCAACTGTGTATGTCAGTGGCTATCTAGCTAAAGTTATTTTGAAAAAGCAAAAATGTCAAGAGTGCTGTCAAACATTAAAAGTTTCGAATCCTGAACAAAATTCAATTTATGATTACATAGCCTTACGAGAATGGTGGAGCGACAAATCTTCCCTCACAGACCCGACACTTCAGCTTTGTAAAACCGTTGATTTAGCTACAAAGGTATTTGAGAGCGAAGTACGACTACAATTATTTCGCCAAAATATCAGTGACTATTGTTTTACAATAATGATAACTTTCTGTGATACGTCATGGATGTGTAAAGATCACAGAAGTATGATGTCTGAGATCTTGTTGCGTCGCCTAAGTCATTTATTAATAAGAAACGATTGCCGCAATATAAATCTTTCCTTCGCGATAACCGAGGAAACTTCTGCAGATTTATCGAAGAAAGCGCAACAACAAGCTATTGCGAAATAA
Protein
MDPGIYPAVISYLKKEGEKMSEKNKLCVAMFDEIALKKRLIYSASSDIVEGYVDFGMEEGRTGEMADHALVFMLQGLHKKFKQPIAHYFVKGTISTQKLVVKNVIKTVRDVGYTVVATSIWVFVESKHFKYLNLRQLNQDSLENLFGAIRQHSPTNRNPTCHHFQAALKSSVLTRLSVPRSRGTNCESDDGEILFDFHDIVFDKKNTEEKKSCGENLLLPGTHRKEPSVSSNEGVLASCTPRNDNFSTSDENLPLLHLDDTDDYDETESDKQLEELYKMFDKQPTVYVSGYLAKVILKKQKCQECCQTLKVSNPEQNSIYDYIALREWWSDKSSLTDPTLQLCKTVDLATKVFESEVRLQLFRQNISDYCFTIMITFCDTSWMCKDHRSMMSEILLRRLSHLLIRNDCRNINLSFAITEETSADLSKKAQQQAIAK

Summary

Uniprot
Pfam
PF05485   THAP
Interpro
IPR006612   THAP_Znf       
ProteinModelPortal

Ontologies

Topology

Length:
436
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0529300000000001
Exp number, first 60 AAs:
0.00017
Total prob of N-in:
0.00357
outside
1  -  436
 
 

Population Genetic Test Statistics

Pi
243.472699
Theta
217.065188
Tajima's D
0.346982
CLR
0.695443
CSRT
0.469426528673566
Interpretation
Uncertain
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