SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13769
Pre Gene Modal
BGIBMGA011532
Annotation
PREDICTED:_protein_FRA10AC1_homolog_isoform_X2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.901
 

Sequence

CDS
ATGCAGAACAACCCCCAGGAGCTTTCATGGCAGGCGATTGAAGCAATAGTGGGGGTTAAACTTCCTTCGAATGTCCTGCGTTTCGATGATATCGGATTCCATTTGGAAAACAATAGAACAACAGTGTCGAGTGTTGAAGATTCCGATTCCGACGTAGAAATTGTCGAAAATGAATGGGAATCGGACAACAACGTATCATCACGGCCTGAGCAATCTGATAACGAGAAGGGTTCGCCTGAAAGAGATCAAAGCGTGTCGCCCGTTCTACATCTAGTAGAGCCTGATAACAACAATTCAGATAAAGATTCACTGGGTTACAAAGATTATATCGAGAAAATGGATACCAAAGATATCATAACCGATAGAGACCAAATCATACCATTAAATGGAGATGATCCAGATAGCTCCAATGGGAATGTTATGTCAATTGAAAACTACTTGGAAGTCACTCTATCAACCGATTCTGATGCTAGTCATGTTACGCTAACGATGTCTGCCAGGTTGCGTAATCTTAATCCTTATGAATTGCATAAGTACCTAGTAAACGTTTATAGCCTGAATACCAAGGGCTCCACGACGCGCTTGAAACGCGACACGTCCAGAGATAGAACTGACCTCGATGTGATTAGAGAAAACCACAAATTTCTGTGGGAAGACGATGACGTAGCCGACACATGGGAAAAACAATTAGCCAAAAAATATCACGACAAACTCTTCAAAGAATATTGTATTTGTGATCTAAGCAGATACAAAGAAAATAAAGTAGCACTTCGATGGAGAATAGAAAAAGAAGTGGTTCTTGGAAAAGGTCAATTTCAATGCGGGAACAAGCAGTGCAATGATAGTCAAGAACTTAAATCTTGGGAAGTCAACTTCGCATACACTGAAGACGGAGAGAAAAAGAATGCTTTAGTGAAGCTTCGTTTATGTCCAGATTGTTCAGCCAAGTTAAACTACAAATCTAAGAAGCGAGAAGTAAAGAGGTTAAAGAAATCGCAAAAGAAGAAAAAGCACAAAAATGAGAGTTCAGGTGACGAAAGCGATTGTGAAGGTCCAAAAACTCCCCCACTTGATGTTCCTGCAGAGCCTTCAACCTCCAAGGGACAAATGCAGGCCTCTGAAGATATAGAGGAGTCTTTGTGGAAGAAAGGTGTGCAAGAAACCGAGGAAAAATCTCGAGAAGAAGAATTCGAAGAATATTTAGAGGAATTGTTGTTATAA
Protein
MQNNPQELSWQAIEAIVGVKLPSNVLRFDDIGFHLENNRTTVSSVEDSDSDVEIVENEWESDNNVSSRPEQSDNEKGSPERDQSVSPVLHLVEPDNNNSDKDSLGYKDYIEKMDTKDIITDRDQIIPLNGDDPDSSNGNVMSIENYLEVTLSTDSDASHVTLTMSARLRNLNPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDVADTWEKQLAKKYHDKLFKEYCICDLSRYKENKVALRWRIEKEVVLGKGQFQCGNKQCNDSQELKSWEVNFAYTEDGEKKNALVKLRLCPDCSAKLNYKSKKREVKRLKKSQKKKKHKNESSGDESDCEGPKTPPLDVPAEPSTSKGQMQASEDIEESLWKKGVQETEEKSREEEFEEYLEELLL

Summary

Uniprot
Pfam
PF09725   Fra10Ac1
Interpro
IPR019129   Folate-sensitive_fs_Fra10Ac1       
ProteinModelPortal

Ontologies

GO

Topology

Length:
406
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00237
Exp number, first 60 AAs:
0.00237
Total prob of N-in:
0.00661
outside
1  -  406
 
 

Population Genetic Test Statistics

Pi
232.136679
Theta
174.181511
Tajima's D
0.149384
CLR
0.001363
CSRT
0.416279186040698
Interpretation
Uncertain
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