Gene

KWMTBOMO13766

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(+):8774523-8777753      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Cytoplasmic   Reliability : 1.016 Nuclear   Reliability : 1.7

CDS

ATGTCCCGCTATCATTTATCTGTTGTGCGTAGCGAAGACGATTCTGACAAAGAGGAAGAAGAGGTTACCCCACCGTTCGTGGTGCCCCGGGTGGCAAGAATGTTTATGGATGAAGAAGATGTGGAAGTTGAAGAAACTTGCGATAACGTTACTTTGGAGTGGCTTCCTCAATCGCCTCAGCCATCCAATTGTGTCTCAACGGCTGCCTCACCGACGCCTATTTTGCCGTCTCCCATCGAGCCAAGCAACAAATTTCAATTTGAATGGAGAGCGATTTCAATGCCTCAAATTGAACCTCATTTGAGGCGAGAACCGTTCTCGCAAATTAGTGGCCCTACAGTTTCTTTCACGAAACCATATGAAGCTTTTATTTCCATATGGGATAATGAAATAATGGAAGTAATCGTTAGGGAAACTAACATTTATGCACTGCAGGTGACAACGGCTATGTTAGAGAATGGGAACCTCTATCCTCATAGCCGAATTACTCATTGGCGAGATACAAATGTAAACGAACTTTACGTGTATTTTGCCATGGTTTTGGCTATGGGAATGGTGATCAAAAACCGGATAGACGAGTACTGGAACAGCTCTAGAGACATCTTCAGTACTCCTGGCTTCAGCACGGAGATGTCATATGACAGATTCGTGCTCCTGTCAAAATGCCTGCATTTTAATAATAATAAAAATCTTAACTCTGCAATGTTGACAGGATCCCAGGCTAAACTTTTTAAAATTAAACCTATAATAGACCACCTTAATTGCAAGTTTTCAAAATTATATAATCTATCTCAAAATGTGGCTCTCGATGAGAGCCTGACCATGTGGAAGGGCTGGCTTGATATAAACCAGTTCATCCCTAACAAGGCAGCAACAGTTGGGATAAAAACATATGAAGTGTGTGAATCCCAGACCGGTTATTTGTGGCGTTTTGAAGTACATGCAGGCCAGGACACCTTGGCACTTCAAGAAGATGATCCAGTCTCAGGGGGAGTACCAGCTCTCGTGCTCAGACTTTTAAATGGTCTTGAGCATAAAGGGCACACAATATGGATGGACAATTACTACAACTCTCCATCACTGGCACGGGAACTGAAAGTCCGGGGATTTGACTGCGTGGGGACCCTCCGGACAAACCGAAAATTCGTACCATCTGAATTTCAAAAGATTACAAAAAACGACATGATTGTCGGTCAAGTGTTGGGCTGCACCTCGGGAGATGTGGATATTATGGTGTGGAGGGATAGAAACCGCGTGGCTTTAATTTCAACATACCATGGTCTCGTAACTACCAGGTGTGGCGATACATTTAAGCCGACTGTCGTGCAAGATTACAATGCTAATATGGGCGGAGTAGACCGTAAGGACCAGCTACTCGCGATGTACCCCATAGAAAGAAGAAAGACTACAGTGTGACCGTTCTAA

Protein

MSRYHLSVVRSEDDSDKEEEEVTPPFVVPRVARMFMDEEDVEVEETCDNVTLEWLPQSPQPSNCVSTAASPTPILPSPIEPSNKFQFEWRAISMPQIEPHLRREPFSQISGPTVSFTKPYEAFISIWDNEIMEVIVRETNIYALQVTTAMLENGNLYPHSRITHWRDTNVNELYVYFAMVLAMGMVIKNRIDEYWNSSRDIFSTPGFSTEMSYDRFVLLSKCLHFNNNKNLNSAMLTGSQAKLFKIKPIIDHLNCKFSKLYNLSQNVALDESLTMWKGWLDINQFIPNKAATVGIKTYEVCESQTGYLWRFEVHAGQDTLALQEDDPVSGGVPALVLRLLNGLEHKGHTIWMDNYYNSPSLARELKVRGFDCVGTLRTNRKFVPSEFQKITKNDMIVGQVLGCTSGDVDIMVWRDRNRVALISTYHGLVTTRCGDTFKPTVVQDYNANMGGVDRKDQLLAMYPIERRKTTVXPF

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

A0A194RRT0   A0A3S2PA36   A0A3S2TBD2   A0A3S2NGQ2   A0A2H1V5F3   A0A2W1BDM1   + More
A0A3S2LRG0   A0A2A4IYX3   A0A2A4JR95   A0A2A4ITI3   A0A2A4IY54   A0A3S2TTE3   A0A2J7PER0   A0A0L7L984   A0A2W1B9N8   A0A2A4K616   A0A2J7Q6H1   A0A2J7PD69   A0A2J7PRG6   A0A2J7QZK8   A0A2J7PIK3   A0A2J7QSN3   A0A3S2M360   A0A3S2NSV7   A0A2J7PE61   A0A2W1BNR3   A0A3S2P001   A0A2J7Q8N9   A0A2K6S7R1   F7FDY8   A0A2K5PIR4   A0A2K5BXT0   H9F6U8   G7MWA2   G7PAN9   A0A2K6ALX5   G3QWT8   A0A2K5KZS5   A0A2K5UF88   A0A2K6NHE6   A0A2K6JV20   A0A2K5XAW3   A0A1D5R1S0   H2NMQ4   Q96DM1   A0A096NT85   A0A0D9SEG0   A0A2K5HN84   K7DKZ9   A0A147BD88   A0A1B6E873   A0A1B6LFF4   H9IWM5   H9J421   A0A2J7R6C2   A0A1B6H7X0   A0A2J7Q4C7   A0A1B0FFI5   A0A2J7PIT0   A0A087UJ51   A0A2J7QF25   A0A087TJF5   A0A2J7PH34   A0A2J7QY13   A0A2J7R708   A0A2J7RD45   A0A087TVE5   J9LP86   A0A1B6LW93   A0A147BEZ3   A0A1B6KKZ3   A0A3Q0JNJ9   A0A1B6JYI5   A0A1B6E8U4   A0A2J7R0C5   A8J4K3   A8J4K9   A0A0K0E1W0   A0A1A8PBD7   A0A1A8D728   A0A2J7Q6F9   A0A1A8PXY9   A0A087TRV5   A0A1A8C9U5   J9KLM1   A0A087U4Y0   A0A2B4SRV7   A0A1B6FTB9   H9J3V8   L7M1S0   A0A1B6E3U1   A0A2J7Q696  

Pubmed

26354079    28756777    26227816    25319552    22002653    22398555    + More
25362486    17431167    14702039    16572171    16136131    29652888    19121390    17934208    25576852   

EMBL

KQ459989    KPJ18766.1    RSAL01000155    RVE45659.1    RSAL01001012    RVE40990.1    + More
RSAL01000045    RVE50637.1    ODYU01000749    SOQ36006.1    KZ150113    PZC73302.1    RSAL01000024    RVE52239.1    NWSH01005160    PCG64390.1    NWSH01000726    PCG74565.1    NWSH01008683    PCG62453.1    NWSH01005605    PCG64100.1    RSAL01000003    RVE54733.1    NEVH01026090    PNF14815.1    JTDY01002247    KOB71806.1    KZ150197    PZC72319.1    NWSH01000091    PCG79681.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    NEVH01026393    PNF14286.1    NEVH01021985    PNF18924.1    NEVH01009069    PNF34004.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01011876    PNF31583.1    RSAL01000056    RVE49901.1    RSAL01000097    RVE47692.1    NEVH01026109    PNF14626.1    PZC73303.1    RSAL01000075    RVE48877.1    NEVH01016950    PNF24933.1    JU326601    AFE70357.1    CM001259    EHH27175.1    CM001282    EHH62949.1    CABD030095328    AQIA01062119    JSUE03037923    ABGA01233763    NDHI03003689    PNJ08370.1    AK057200    AK094816    AK289491    AC079203    AHZZ02030739    AQIB01116437    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    GEGO01007089    JAR88315.1    GEDC01003168    JAS34130.1    GEBQ01017560    JAT22417.1    BABH01021160    BABH01021161    BABH01021162    BABH01021163    BABH01041064    NEVH01006795    PNF36382.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    NEVH01018384    PNF23441.1    CCAG010009903    NEVH01024959    PNF16251.1    KK120039    KFM77390.1    NEVH01015302    PNF27192.1    KK115494    KFM65244.1    NEVH01025150    PNF15655.1    NEVH01009368    PNF33480.1    NEVH01006740    PNF36596.1    NEVH01005303    PNF38748.1    KK116918    KFM69084.1    ABLF02006169    ABLF02055685    GEBQ01012026    JAT27951.1    GEGO01006047    JAR89357.1    GEBQ01027849    JAT12128.1    GECU01003439    JAT04268.1    GEDC01002971    JAS34327.1    NEVH01008275    PNF34265.1    AB300556    BAF82019.1    AB300558    BAF82021.1    HAEI01002033    SBR78690.1    HAEA01000274    SBQ28754.1    NEVH01017495    PNF24164.1    HAEH01008939    SBR85849.1    KK116466    KFM67844.1    HADZ01012453    SBP76394.1    ABLF02028028    KK118194    KFM72419.1    LSMT01000021    PFX32631.1    GECZ01016293    JAS53476.1    BABH01028864    GACK01007981    JAA57053.1    GEDC01004717    JAS32581.1    NEVH01017534    PNF24104.1   

Proteomes

UP000053240    UP000283053    UP000218220    UP000235965    UP000037510    UP000233220    + More
UP000008225    UP000233040    UP000233020    UP000009130    UP000233120    UP000001519    UP000233060    UP000233100    UP000233200    UP000233180    UP000233140    UP000006718    UP000001595    UP000005640    UP000028761    UP000029965    UP000233080    UP000002277    UP000005204    UP000092444    UP000054359    UP000007819    UP000079169    UP000035681    UP000225706   

PRIDE

Q96DM1    H9IWM5    H9J421    H9J3V8   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2
PF01094   ANF_receptor
PF05225   HTH_psq

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR018159   Spectrin/alpha-actinin       
IPR028082   Peripla_BP_I       
IPR001828   ANF_lig-bd_rcpt       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF53822   SSF53822        + More
SSF46689   SSF46689       
SSF57667   SSF57667       

ProteinModelPortal

A0A194RRT0   A0A3S2PA36   A0A3S2TBD2   A0A3S2NGQ2   A0A2H1V5F3   A0A2W1BDM1   + More
A0A3S2LRG0   A0A2A4IYX3   A0A2A4JR95   A0A2A4ITI3   A0A2A4IY54   A0A3S2TTE3   A0A2J7PER0   A0A0L7L984   A0A2W1B9N8   A0A2A4K616   A0A2J7Q6H1   A0A2J7PD69   A0A2J7PRG6   A0A2J7QZK8   A0A2J7PIK3   A0A2J7QSN3   A0A3S2M360   A0A3S2NSV7   A0A2J7PE61   A0A2W1BNR3   A0A3S2P001   A0A2J7Q8N9   A0A2K6S7R1   F7FDY8   A0A2K5PIR4   A0A2K5BXT0   H9F6U8   G7MWA2   G7PAN9   A0A2K6ALX5   G3QWT8   A0A2K5KZS5   A0A2K5UF88   A0A2K6NHE6   A0A2K6JV20   A0A2K5XAW3   A0A1D5R1S0   H2NMQ4   Q96DM1   A0A096NT85   A0A0D9SEG0   A0A2K5HN84   K7DKZ9   A0A147BD88   A0A1B6E873   A0A1B6LFF4   H9IWM5   H9J421   A0A2J7R6C2   A0A1B6H7X0   A0A2J7Q4C7   A0A1B0FFI5   A0A2J7PIT0   A0A087UJ51   A0A2J7QF25   A0A087TJF5   A0A2J7PH34   A0A2J7QY13   A0A2J7R708   A0A2J7RD45   A0A087TVE5   J9LP86   A0A1B6LW93   A0A147BEZ3   A0A1B6KKZ3   A0A3Q0JNJ9   A0A1B6JYI5   A0A1B6E8U4   A0A2J7R0C5   A8J4K3   A8J4K9   A0A0K0E1W0   A0A1A8PBD7   A0A1A8D728   A0A2J7Q6F9   A0A1A8PXY9   A0A087TRV5   A0A1A8C9U5   J9KLM1   A0A087U4Y0   A0A2B4SRV7   A0A1B6FTB9   H9J3V8   L7M1S0   A0A1B6E3U1   A0A2J7Q696  

KEGG

101742359    no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0016021   GO:0005634   GO:0003677  

Subcellular location

Nucleus  

Length:

474

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.92682

Exp number, first 60 AAs:

0

Total prob of N-in:

0.16464

outside

1  -  474

 

 

Pi

199.880218

Theta

171.95684

Tajima's D

0.656932

CLR

0.059643

CSRT

0.559822008899555

Interpretation

Uncertain