SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13764
Pre Gene Modal
BGIBMGA011483
Annotation
PREDICTED:_palmitoleoyl-protein_carboxylesterase_NOTUM_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.675
 

Sequence

CDS
ATGGAGAAGAGCGCTACCGTGCAGGCGGGGCGGGTCCGGCAACCGTTCAGTCAGTGGTGCGCGCGCGCCTTCCAGTATGGGGTGTGCTTTGGATCTATTTCCGCGCTCGTGTTCGCTTGTTTTCCGCTCTCCGAAGCGATGAGAACTCGACGCCGCGGCGCTAAATGCCGCTACACCTGGAACTGGATTACATGGACGATTTGTGCTATTCTAAGTTCGGTCAGCGGGAGTGCGTCGCCCCCCGACAGTTTGAAACTAGTCTGGCTCTCTAATACTACACTAACTTGCAACGACGGCTCTCCAACAGGATATTATTTTCGCCGTGGCTCTAACACTGAACACTGGGTGGTATATCTTGAAGGCGGTGGATACTGTTGGGATACAGCGTCATGCAGAGCACGGTGGCGGCGACGACCAGCGCTCATGTCTTCCACTCGTTGGCCAAGAGTTCGTCGAGCACCTGCGCTGCTGTCTGCAGAACGAACTGCTAACCCGCTGTGGCACGCCTCAAACCACGTCCTTCTTCCGTACTGTTCGAGTGATATGTGGTCGGGTACACGAACCGCAACGCATGCAGTTGGAGGATTTTCTTTTACCGGGAGATTAATTGTGGAGGGAGTGCTTGAGGATCTCTTGCGGGCAGGACTGTCTGGTCGACTTATGTTCGTTGGGTCTAGTGCGGGCGGGACTGGTGTGATGCTACACGTGGATGCAGCTAGACGTGCCTTACGATCGAAAAGAATAAAAGTCGCCGCTGTCTCAGATTCCGGCTGGTTCCTAGATCGACCGGCGCGCGATCGACGGGTTCCTGCAGCCGCTATAGCGCGTCTCGGTCATTCTTTGTGGCGTGGTACTCCACCAAATTCATGTGTGCGAAAACATGTTAAAGAACCATGGCTGTGTTATTTTGGATATCGACTGTACCCACATATCCGGACTCCGTTGTTCGTGTTCCAATATCTGTTTGATTCGGCACAATTGGCCGCCGAAGGTGTTCGCGCACCTCGAACTAGAACGCAGTGGGAAATGGTTCATAAAACTGGTGTCGCTCTACGAACGAGTCTCGATTCGGTTCGGACTGTGTATGCGCCGGCGTGCCTCGCGCACGGCGCACTCGCAAGGCCAGAATGGCTCGCCATAAATGTATCCGGTATATCCCTACCTCGTGCGCTCGCCTGCTGGGAACGCCGCTTGGGGCGAGCAAAAAAGACACATGTTCGCGGTGGTTGTGCCCCCCGGAGGCTCGTTGAAATATGTTCTTGGCCTCAGTGTAACGGGTCCTGTCCGCGACTTCGCGACCCTCGGACCGGGGAAGAAGTGGCGTTGGCAACGCTTTTGCAAAGCTTCGGGATGGATGTACACGGAGCGGCGGCAGCTATGGGAATAGACGCAGGCGCCTTCTCTAGAATGAGTCATGCGGAGTTGTTTCCGCTCCTCGCACCGCACGTGTGA
Protein
MEKSATVQAGRVRQPFSQWCARAFQYGVCFGSISALVFACFPLSEAMRTRRRGAKCRYTWNWITWTICAILSSVSGSASPPDSLKLVWLSNTTLTCNDGSPTGYYFRRGSNTEHWVVYLEGGGYCWDTASCRARWRRRPALMSSTRWPRVRRAPALLSAERTANPLWHASNHVLLPYCSSDMWSGTRTATHAVGGFSFTGRLIVEGVLEDLLRAGLSGRLMFVGSSAGGTGVMLHVDAARRALRSKRIKVAAVSDSGWFLDRPARDRRVPAAAIARLGHSLWRGTPPNSCVRKHVKEPWLCYFGYRLYPHIRTPLFVFQYLFDSAQLAAEGVRAPRTRTQWEMVHKTGVALRTSLDSVRTVYAPACLAHGALARPEWLAINVSGISLPRALACWERRLGRAKKTHVRGGCAPRRLVEICSWPQCNGSCPRLRDPRTGEEVALATLLQSFGMDVHGAAAAMGIDAGAFSRMSHAELFPLLAPHV

Summary

Pfam
PF03283   PAE
Interpro
IPR004963   PAE/NOTUM        + More
IPR029058   AB_hydrolase       
SUPFAM
SSF53474   SSF53474       
PDB
4UZJ     E-value=4.80353e-87,     Score=820

Ontologies

Topology

Length:
483
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.4723800000001
Exp number, first 60 AAs:
23.40839
Total prob of N-in:
0.18776
POSSIBLE N-term signal
sequence
outside
1  -  22
TMhelix
23  -  45
inside
46  -  57
TMhelix
58  -  80
outside
81  -  483
 
 

Population Genetic Test Statistics

Pi
232.265624
Theta
160.841631
Tajima's D
-2.195964
CLR
17.612132
CSRT
0.00594970251487426
Interpretation
Possibly Positive selection
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