Gene

KWMTBOMO13762

Pre Gene Modal

BGIBMGA011530

Annotation

ionotropic_glutamate_receptor_[Helicoverpa_armigera]

Location

Bomo_Chr23(+):8684083-8694633      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.632 Nuclear   Reliability : 1.089 PlasmaMembrane   Reliability : 1.325

CDS

ATGCTGCAGCCTCCCAGAACTGACAGCTACTCAGTTTGGAGATCGTTATGCTCCAATACTGCAATGAGGCCAGTTGCAGTTTTTGGACCTCAAAACCCAATCTCCGACAAGGCAGTTCGTGATCAATGCGCTATTGCTAACATACCTCACATACAAGCCACAATGAAACCACTAGATCCAGATCTTGAACTTAATGAGGAATTAGATTCAAGTAATTCCCAAATTGAAACCGCCGATGAGGCTGCTGCTTTTAAGAAAATAACCATAAATTTTTACCCAGAATCAGACGAAATATCTGTAGCTTACGGGAAACTACTAAATTTTTACAACTGGAAGGTTTTCGCAGTTCTTTACGAAGACGATTTTGGATTACTTCGCATTCAAAAGATACTCGGCAGACATAGTGACGACTATCCAGTAACTGTGTATAGATTAGATCCAGAGGGAGACAACAGAAGTATATTCAAACTTCTGAATGAAGACAGAGAAGATCGAATTTTATTGGATTGTCATGTAGACAGAGTTATGAAATATATGGAGGAAGCTGGTAGCTTCAAGAACTTGAGCAACTATCAGCACTACATCTTAGTAACCTTGGATGCAGCTACGATTTATGATAAATTAATAAACCTTCCTTTAAATGTAACCTGGTTAAGCCTGACAGAATTTGAAAAAATTAAAGATGCTCAACATTATTTAGCGACTAGAGTTGGAAAATGGTCTAATGACTTTTCAACCAAAGTCAATCAGATGAAGACTGATGAATTGGTAATGGATGATATTACCAACCACGTGGTGAAAGCAATGGAAACAATAGAAGACTTAAGAAAACCAGATTTTCCAATATGCGAAAAAGATCCACATCCCTGGCCACATGGAGCACAACTACAAAAAGCTATACTGCAGACTAAAACTGTCGGTGTTACTGGTAACATAGAATTCAACGAGAACGGCAAAAGGATAAACTACGTTTTGTTTGTAAATGAAATTTACATGTCGCAAAGATATACTATAGGGAAATGGGATTCATCCAATGCCACTGAAATTGTCGAAACCAGACAAACAGATAATCGCACTACTGCGCAACAAAGTAAACATTTTATTGTAATTTCTAGAAGAAACAAACCGTATTTTTACGAGAAGGAACCATGCAAGGAGGGAGACACCACATGTGTGAACGATAAAGAGAAATACGAAGGATTCTCTGTTGATCTCGTAAAGGCCATTTTCGAGATTTTAAAAAGCGAAAACTTTAATTACACTTACTCCTTCTTCCATGACGAGGACAAAGATTATGGGGAATATGACGTGAAAACAAAGAAATGGAATGGCTTAATCGGTGACTTACTCGATAAGAAAGCAGACTTAGCCGTCTGTGATCTAACAATCACTGAAGATCGAAAGAAGATTGTGGATTTTTCAGTTCCATTCATGTCGTTAGGCATAAGTATATTGTTTAAGAAACAGCTTGCGGAACCACCTGGAATGTTTTCTTTCCTCAATCCATATAGTGTCGGGGTATGGCTGTACACAGCTACCGCTTATTGCGTCGTTTCAATGGTGCTATTTGTTTGTTCCAGAATTTCACCTGCTGATTGGGAAAACCCGGAACCTTGCGAGAAAAATCCAGAAGAATTAGAAAATATTTGGACATTCAAGAACTGTGCGTGGTTGACAATGGGATCTATCATGACACAAGGATGTGATATCTTACCCAAGGCTATCGGAACCCGTTGGGTCTGCGGAATGTGGTGGTTCTTCTCTATGATTGTGTGTCAAACATATATCGCCCAGCTGTCGGCTTCGATGACAACCGCTTTGGAAAGTGAATCTATTAAAAGCGTAGAAGATTTAGCGGCTCAAAACAAAATACTATACGGCGCTATTAAGGGGGGATCTACAGTTGATTTTTTTAAGAACTCCAAAGACAAAACCTTCAGACGTATGTATGAAACAATGAACTCAAATCCAGCATTGCTAGTCAAAAGTAACGATGAAGGAGTGAGAAGGGTTTTAAGCGGATCTAACAAATACGCTTTCTTCATGGAATCTTCTGCCATTGAATACAAGCTTAGAAGAGACTGTAGACTGAAAAAAATAGGAGGGGAACTGGACAACAAATACTATGGGATCGCTATGCCAGCAAATTCTCCTTTTCGAACTCATATAAATAGGGCTATATTGAAACTACAAGAGTCGACAAAGTTAGATAAAATCAGGAACTTATGGTGGTTACAAAAGTATGATGCGAAAATCTGCAAGGATGTAGACGTTGACGCGAACGACGTACAAGGGGACTTGGAGCTTGAAAATCTTCTAGGTGCTTTCGTTGTACTGATAGTTGGCATATTCTTTAGCCTCATTATTACCGCCATAGAATTCATGAACGAAGTCAGGAATATCGTTGTTCGTGAAAATGTCACACACAAAGAAGTTCTTGTCAAAGAATTAAAAGCTTCGCTGAACTTTTTCAACAAGCAGAAGCCAGTACTGAGGAACCCGAGCCGTGCTCCATCGTTGGCAGGCACAGAGGAATCTGAAGATAAAAACAAAGAGAAGAAGCAGAAGAAAGAAAAAAGCATTGAAAACTTTATGGATTTCGAAAAAGGAGCTTCGATGAATAATTAA

Protein

MLQPPRTDSYSVWRSLCSNTAMRPVAVFGPQNPISDKAVRDQCAIANIPHIQATMKPLDPDLELNEELDSSNSQIETADEAAAFKKITINFYPESDEISVAYGKLLNFYNWKVFAVLYEDDFGLLRIQKILGRHSDDYPVTVYRLDPEGDNRSIFKLLNEDREDRILLDCHVDRVMKYMEEAGSFKNLSNYQHYILVTLDAATIYDKLINLPLNVTWLSLTEFEKIKDAQHYLATRVGKWSNDFSTKVNQMKTDELVMDDITNHVVKAMETIEDLRKPDFPICEKDPHPWPHGAQLQKAILQTKTVGVTGNIEFNENGKRINYVLFVNEIYMSQRYTIGKWDSSNATEIVETRQTDNRTTAQQSKHFIVISRRNKPYFYEKEPCKEGDTTCVNDKEKYEGFSVDLVKAIFEILKSENFNYTYSFFHDEDKDYGEYDVKTKKWNGLIGDLLDKKADLAVCDLTITEDRKKIVDFSVPFMSLGISILFKKQLAEPPGMFSFLNPYSVGVWLYTATAYCVVSMVLFVCSRISPADWENPEPCEKNPEELENIWTFKNCAWLTMGSIMTQGCDILPKAIGTRWVCGMWWFFSMIVCQTYIAQLSASMTTALESESIKSVEDLAAQNKILYGAIKGGSTVDFFKNSKDKTFRRMYETMNSNPALLVKSNDEGVRRVLSGSNKYAFFMESSAIEYKLRRDCRLKKIGGELDNKYYGIAMPANSPFRTHINRAILKLQESTKLDKIRNLWWLQKYDAKICKDVDVDANDVQGDLELENLLGAFVVLIVGIFFSLIITAIEFMNEVRNIVVRENVTHKEVLVKELKASLNFFNKQKPVLRNPSRAPSLAGTEESEDKNKEKKQKKEKSIENFMDFEKGASMNN

Similarity

Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.

Uniprot

A0A0B5A1Y6   A0A2H1WCB3   A0A075T678   A0A0N1PH66   A0A212EQS2   A0A194RR91   + More
A0A2H1W6P8   A0A2W1BMM8   A0A2A4J734   A0A212EQW1   A0A182H4S6   A0A0N1PG13   Q17HY6   A0A1S4F1W5   A0A3S2NWQ7   A0A1Q3FZA3   A0A182H4S5   A0A182GWX5   A0A1Q3FZ95   Q7QHV3   A0A084WPK0   A0A182XPJ9   A0A182HFV7   A0A182JKW8   Q17HY5   A0A1S4F219   A0A182VIJ3   A0A3S2M3Z8   A0A182TWK6   A0A182N102   A0A194RPP3   W5JDY5   A0A1L8DK79   A0A182VMN8   A0A182P835   Q7QE65   A0A182LIW7   A0A182FK06   A0A182M854   A0A182KFG5   T1H819   A0A182Q917   A0A182RJ06   A0A182I9N5   A0A182YEZ2   A0A182X5A0   A0A1Y9GKF3   A0A2J7QQG3   Q7PRP7   A0A195DUH1   A0A1S4G9Z3   A0A158NJ03   A0A195FIP6   A0A0M4JB15   A0A2M4BDE6   F5HJZ1   A0A084WPK1   A0A1W4XE85   A0A1S4GA38   A0A2J7QQK9   A0A1W4XFF8   A0A336KHH4   A0A1W4XF50   A0A2J7QQG1   E0VK11   T1PMA4   A0A3L8DZQ4   A0A2U9NJD5   A0A0A1XPV5   A0A140CQC2   A0A1I8NU50   A0A1S4EBS0   A0A2J7QQL5   A0A1W4X4N7   A0A2J7QQL0   A0A0K8V3R8   A0A034V5K6   A0A067QWX4   A0A1I8MEH0   A0A2J7QQG8   A0A1S4EC64   A0A2H4ZBE6   A0A223HCX9   A0A345BF16   A0A0V0J2K9   A0A0F7QEG0   H9JPS3   A0A023F5M1   A0A075T818   A0A2A4J849   B4IFM4   A0A0J9R5B5   A0A139WN68   A0A3S2NLN9   D6X0W1   A0A0J9R4W9   A0A0J9R6E4   B3NKS8  

Pubmed

25027790    26354079    22118469    28756777    26483478    17510324    + More
12364791    14747013    17210077    24438588    20920257    23761445    20966253    25244985    21347285    26265180    20566863    30249741    25830018    26752702    25348373    24845553    25315136    29133804    28150741    29727827    27006164    25803580    19121390    25474469    17994087    22936249    18362917    19820115   

EMBL

KJ542734    AJD81618.1    ODYU01007642    SOQ50596.1    KF768736    AIG51930.1    + More
KQ459037    KPJ04259.1    AGBW02013238    OWR43843.1    KQ459833    KPJ19825.1    ODYU01006689    SOQ48759.1    KZ150075    PZC73970.1    NWSH01002576    PCG67937.1    OWR43841.1    JXUM01110194    KQ565389    KXJ71034.1    KPJ04257.1    CH477244    EAT46290.1    RSAL01000042    RVE50833.1    GFDL01002185    JAV32860.1    KXJ71033.1    JXUM01094236    KQ564114    KXJ72756.1    GFDL01002179    JAV32866.1    AAAB01008815    EAA05023.4    ATLV01025084    KE525369    KFB52144.1    APCN01007369    EAT46291.1    RVE50832.1    KPJ19823.1    ADMH02001821    ETN61009.1    GFDF01007263    JAV06821.1    AAAB01008847    EAA06913.4    AXCM01004371    ACPB03008552    AXCN02001376    APCN01001012    APCN01001013    APCN01001007    APCN01001008    APCN01001009    APCN01001010    APCN01001011    NEVH01012087    PNF30825.1    EAA06836.6    KQ980334    KYN16523.1    ADTU01017309    ADTU01017310    ADTU01017311    ADTU01017312    ADTU01017313    ADTU01017314    ADTU01017315    ADTU01017316    ADTU01017317    ADTU01017318    KQ981523    KYN40142.1    KP843209    ALD51346.1    GGFJ01001924    MBW51065.1    EGK96607.1    ATLV01025088    ATLV01025089    ATLV01025090    ATLV01025091    ATLV01025092    KFB52145.1    PNF30870.1    UFQS01000433    UFQT01000433    SSX03889.1    SSX24254.1    PNF30824.1    DS235235    EEB13717.1    KA649912    AFP64541.1    QOIP01000002    RLU25960.1    MF385087    AWT23259.1    GBXI01001226    JAD13066.1    KR998364    AMH85983.1    PNF30867.1    PNF30869.1    GDHF01018808    GDHF01006355    JAI33506.1    JAI45959.1    GAKP01021897    JAC37055.1    KK853270    KDR09166.1    PNF30826.1    MF975501    AUF73077.1    KY283580    AST36240.1    MG820669    AXF48840.1    GDKB01000032    JAP38464.1    LC017781    BAR64795.1    BABH01015229    GBBI01002254    JAC16458.1    KF768733    AIG51927.1    PCG67936.1    CH480833    EDW46446.1    CM002910    KMY91308.1    KQ971312    KYB29344.1    RVE50836.1    KQ971372    EFA10562.2    KMY91307.1    KMY91304.1    CH954179    EDV54451.2   

Proteomes

UP000053268    UP000007151    UP000053240    UP000218220    UP000069940    UP000249989    + More
UP000008820    UP000283053    UP000007062    UP000030765    UP000076407    UP000075840    UP000075880    UP000075903    UP000075902    UP000075884    UP000000673    UP000075885    UP000075882    UP000069272    UP000075883    UP000075881    UP000015103    UP000075886    UP000075900    UP000076408    UP000235965    UP000078492    UP000005205    UP000078541    UP000192223    UP000009046    UP000279307    UP000095300    UP000079169    UP000027135    UP000095301    UP000005204    UP000001292    UP000007266    UP000008711   

PRIDE

H9JPS3   

Pfam

PF01094   ANF_receptor        + More
PF00060   Lig_chan
PF10613   Lig_chan-Glu_bd
PF00497   SBP_bac_3

Interpro

IPR028082   Peripla_BP_I        + More
IPR001320   Iontro_rcpt       
IPR019594   Glu/Gly-bd       
IPR001508   Iono_rcpt_met       
IPR001828   ANF_lig-bd_rcpt       
IPR001638   Solute-binding_3/MltF_N       

SUPFAM

SSF53822   SSF53822       

ProteinModelPortal

A0A0B5A1Y6   A0A2H1WCB3   A0A075T678   A0A0N1PH66   A0A212EQS2   A0A194RR91   + More
A0A2H1W6P8   A0A2W1BMM8   A0A2A4J734   A0A212EQW1   A0A182H4S6   A0A0N1PG13   Q17HY6   A0A1S4F1W5   A0A3S2NWQ7   A0A1Q3FZA3   A0A182H4S5   A0A182GWX5   A0A1Q3FZ95   Q7QHV3   A0A084WPK0   A0A182XPJ9   A0A182HFV7   A0A182JKW8   Q17HY5   A0A1S4F219   A0A182VIJ3   A0A3S2M3Z8   A0A182TWK6   A0A182N102   A0A194RPP3   W5JDY5   A0A1L8DK79   A0A182VMN8   A0A182P835   Q7QE65   A0A182LIW7   A0A182FK06   A0A182M854   A0A182KFG5   T1H819   A0A182Q917   A0A182RJ06   A0A182I9N5   A0A182YEZ2   A0A182X5A0   A0A1Y9GKF3   A0A2J7QQG3   Q7PRP7   A0A195DUH1   A0A1S4G9Z3   A0A158NJ03   A0A195FIP6   A0A0M4JB15   A0A2M4BDE6   F5HJZ1   A0A084WPK1   A0A1W4XE85   A0A1S4GA38   A0A2J7QQK9   A0A1W4XFF8   A0A336KHH4   A0A1W4XF50   A0A2J7QQG1   E0VK11   T1PMA4   A0A3L8DZQ4   A0A2U9NJD5   A0A0A1XPV5   A0A140CQC2   A0A1I8NU50   A0A1S4EBS0   A0A2J7QQL5   A0A1W4X4N7   A0A2J7QQL0   A0A0K8V3R8   A0A034V5K6   A0A067QWX4   A0A1I8MEH0   A0A2J7QQG8   A0A1S4EC64   A0A2H4ZBE6   A0A223HCX9   A0A345BF16   A0A0V0J2K9   A0A0F7QEG0   H9JPS3   A0A023F5M1   A0A075T818   A0A2A4J849   B4IFM4   A0A0J9R5B5   A0A139WN68   A0A3S2NLN9   D6X0W1   A0A0J9R4W9   A0A0J9R6E4   B3NKS8  

PDB

5KUF     E-value=9.22456e-117,     Score=1078

KEGG

101744870    no KO assigned | (RefSeq) glutamate receptor ionotropic, kainate 2-like

GO

GO:0030054   GO:0045211   GO:0004970   GO:0016021   GO:0006811   GO:1904315   GO:0008066   GO:0005886   GO:0035249   GO:0050804   GO:0005234   GO:0016020   GO:0004872   GO:0005216   GO:0016787   GO:0003676   GO:0016491   GO:0015930   GO:0038023  

Subcellular location

  

Length:

875

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

62.7383

Exp number, first 60 AAs:

0.00115

Total prob of N-in:

0.00294

outside

1  -  502

TMhelix

503  -  525

inside

526  -  574

TMhelix

575  -  597

outside

598  -  771

TMhelix

772  -  794

inside

795  -  875

 

 

Pi

243.025075

Theta

197.361751

Tajima's D

0.807731

CLR

0.528169

CSRT

0.60141992900355

Interpretation

Uncertain