Gene

KWMTBOMO13760

Pre Gene Modal

BGIBMGA011529

Annotation

PREDICTED:_glutamate_receptor_ionotropic?_kainate_2-like_[Papilio_polytes]

Location

Bomo_Chr23(+):8657243-8657887      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.572

CDS

ATGTGGGGCACCATGGAATCCGCTCGTCCTTCGGTTTTCGTAAAGAACAACGACGAAGGCGTCGAAAGAGTACTTAAAAGCAGAAGAGGTTATGCCTATTTCATGGAATCAACTGCTATTGAATACCAGTTAGAGCGTCATTGTGAACTAATGCAGATCGGCGACCCTCTTGATTCAAAAGGATACGGAATCGCAATGCCGTTTTTCTCTTCATACCGTGGTGCCGTCGATAACGCTGTACTAAAATTAGCCGAAAGCGGGAAATTGGTGGAGATAAAAAATCGTTGGTGGAAATTGCCTCCCGAAGAAGCTTGTGTTGTTAGTTTTTAA

Protein

MWGTMESARPSVFVKNNDEGVERVLKSRRGYAYFMESTAIEYQLERHCELMQIGDPLDSKGYGIAMPFFSSYRGAVDNAVLKLAESGKLVEIKNRWWKLPPEEACVVSF

Similarity

Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.

Uniprot

H9JPS4   A0A2W1BMM8   A0A2H1W6P8   A0A2A4J734   A0A345BF45   A0A194RPP3   + More
A0A0N1PG13   A0A3S2NWQ7   A0A212EQW1   T1H819   A0A0A9W0D8   A0A0A9XMV4   A0A0A9XKR2   A0A0A9XVL7   A0A0K8T8I2   A0A0L7LUJ9   A0A2R7WSB7   A0A2R7WSA1   A0A1B6H573   A0A1B6JNX3   E0VK11   A0A1B6DA51   A0A3Q0ITI1   A0A158NUC9   A0A1B6DEF0   W5JDY5   A0A2S2PLM7   A0A1B6H180   A0A182TV70   A0A182FK06   A0A182X5A0   A0A182VMN8   A0A182VV99   A0A182I9N5   A0A182RJ06   Q7QE65   A0A182Q917   A0A182M854   A0A182KFG5   A0A182P835   A0A182N102   A0A182YEZ2   A0A182TWK6   A0A182JKW8   A0A2M4BZ21   A0A2M4BZ03   A0A195BSB9   A0A084WPK0   A0A0A1XPV5   A0A140CQC2   A0A182SDM9   A0A2S2R3Y9   A0A2J7QQG2   A0A087ZD04   A0A182YEZ6   A0A182LIW7   W5JDY0   Q7QHV3   A0A182XPJ9   A0A182HFV7   A0A182VIJ3   A0A182RJ09   A0A182VED6   A0A182VVA3   A0A182IZJ3   A0A182U976   T1H541   A0A182N0Z9   A0A2J7QQG7   A0A034V5K6   K7J6E6   A0A1Q3FZA3   B0XGR9   A0A1Q3FZ95   A0A0K8V3R8   A0A182H4S5   A0A1S4F219   Q17HY5   A0A182GWX5   A0A2W1BI66   A0A2P9JYA1   A0A2S2PM36   A0A2H8U1C3   A0A1S5VFU4   A0A1S4F1W5   Q17HY6   A0A2U9NJG4   A0A182H4S6   A0A182G7V3   A0A2J7QQH3   A0A195BLH4   A0A2J7QQK8   A0A2J7QQK1   A0A2J7QQK6   A0A067QWX4   A0A310S5S6   A0A310S9P8   A0A1J1IX76   A0A2R7WBZ6   A0A182P838  

Pubmed

19121390    28756777    29727827    26354079    22118469    25401762    + More
26823975    26227816    20566863    21347285    20920257    23761445    12364791    14747013    17210077    25244985    24438588    25830018    26752702    20966253    25348373    20075255    26483478    17510324    28187311    24845553   

EMBL

BABH01015232    KZ150075    PZC73970.1    ODYU01006689    SOQ48759.1    NWSH01002576    + More
PCG67937.1    MG820698    AXF48869.1    KQ459833    KPJ19823.1    KQ459037    KPJ04257.1    RSAL01000042    RVE50833.1    AGBW02013238    OWR43841.1    ACPB03008552    GBHO01042723    JAG00881.1    GBHO01022290    GDHC01007640    JAG21314.1    JAQ10989.1    GBHO01022287    JAG21317.1    GBHO01022289    GBRD01004119    JAG21315.1    JAG61702.1    GBRD01004120    JAG61701.1    JTDY01000067    KOB79074.1    KK855412    PTY22443.1    PTY22444.1    GECU01037857    JAS69849.1    GECU01006758    JAT00949.1    DS235235    EEB13717.1    GEDC01014721    JAS22577.1    ADTU01026376    ADTU01026377    GEDC01026520    GEDC01013278    JAS10778.1    JAS24020.1    ADMH02001821    ETN61009.1    GGMR01017668    MBY30287.1    GECZ01001371    JAS68398.1    APCN01001012    APCN01001013    AAAB01008847    EAA06913.4    AXCN02001376    AXCM01004371    GGFJ01009020    MBW58161.1    GGFJ01009000    MBW58141.1    KQ976417    KYM89915.1    ATLV01025084    KE525369    KFB52144.1    GBXI01001226    JAD13066.1    KR998364    AMH85983.1    GGMS01015526    MBY84729.1    NEVH01012087    PNF30820.1    GGFL01003458    MBW67636.1    ADMH02001779    ETN61105.1    AAAB01008815    EAA05023.4    APCN01007369    CAQQ02162970    CAQQ02162971    PNF30821.1    GAKP01021897    JAC37055.1    AAZX01000424    AAZX01000429    AAZX01008541    AAZX01011194    AAZX01013279    AAZX01013570    AAZX01013893    AAZX01015619    AAZX01025922    GFDL01002185    JAV32860.1    DS233058    EDS27792.1    GFDL01002179    JAV32866.1    GDHF01018808    GDHF01006355    JAI33506.1    JAI45959.1    JXUM01110194    KQ565389    KXJ71033.1    CH477244    EAT46291.1    JXUM01094236    KQ564114    KXJ72756.1    PZC73971.1    KY817091    AVH87307.1    GGMR01017854    MBY30473.1    GFXV01008185    MBW19990.1    KY445581    AQN78516.1    EAT46290.1    MF385150    AWT23321.1    KXJ71034.1    JXUM01008704    KQ560267    KXJ83447.1    PNF30822.1    KQ976453    KYM85527.1    PNF30868.1    PNF30865.1    PNF30864.1    KK853270    KDR09166.1    GGOB01000004    MCH29400.1    GGOB01000002    MCH29398.1    CVRI01000063    CRL04875.1    KK854577    PTY17048.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000007151    + More
UP000015103    UP000037510    UP000009046    UP000079169    UP000005205    UP000000673    UP000075902    UP000069272    UP000076407    UP000075903    UP000075920    UP000075840    UP000075900    UP000007062    UP000075886    UP000075883    UP000075881    UP000075885    UP000075884    UP000076408    UP000075880    UP000078540    UP000030765    UP000075901    UP000235965    UP000075882    UP000015102    UP000002358    UP000002320    UP000069940    UP000249989    UP000008820    UP000027135    UP000183832   

PRIDE

H9JPS4   

Pfam

PF00060   Lig_chan        + More
PF00497   SBP_bac_3
PF01094   ANF_receptor
PF10613   Lig_chan-Glu_bd

Interpro

IPR001638   Solute-binding_3/MltF_N        + More
IPR001320   Iontro_rcpt       
IPR028082   Peripla_BP_I       
IPR019594   Glu/Gly-bd       
IPR001508   Iono_rcpt_met       
IPR001828   ANF_lig-bd_rcpt       

SUPFAM

SSF53822   SSF53822       

ProteinModelPortal

H9JPS4   A0A2W1BMM8   A0A2H1W6P8   A0A2A4J734   A0A345BF45   A0A194RPP3   + More
A0A0N1PG13   A0A3S2NWQ7   A0A212EQW1   T1H819   A0A0A9W0D8   A0A0A9XMV4   A0A0A9XKR2   A0A0A9XVL7   A0A0K8T8I2   A0A0L7LUJ9   A0A2R7WSB7   A0A2R7WSA1   A0A1B6H573   A0A1B6JNX3   E0VK11   A0A1B6DA51   A0A3Q0ITI1   A0A158NUC9   A0A1B6DEF0   W5JDY5   A0A2S2PLM7   A0A1B6H180   A0A182TV70   A0A182FK06   A0A182X5A0   A0A182VMN8   A0A182VV99   A0A182I9N5   A0A182RJ06   Q7QE65   A0A182Q917   A0A182M854   A0A182KFG5   A0A182P835   A0A182N102   A0A182YEZ2   A0A182TWK6   A0A182JKW8   A0A2M4BZ21   A0A2M4BZ03   A0A195BSB9   A0A084WPK0   A0A0A1XPV5   A0A140CQC2   A0A182SDM9   A0A2S2R3Y9   A0A2J7QQG2   A0A087ZD04   A0A182YEZ6   A0A182LIW7   W5JDY0   Q7QHV3   A0A182XPJ9   A0A182HFV7   A0A182VIJ3   A0A182RJ09   A0A182VED6   A0A182VVA3   A0A182IZJ3   A0A182U976   T1H541   A0A182N0Z9   A0A2J7QQG7   A0A034V5K6   K7J6E6   A0A1Q3FZA3   B0XGR9   A0A1Q3FZ95   A0A0K8V3R8   A0A182H4S5   A0A1S4F219   Q17HY5   A0A182GWX5   A0A2W1BI66   A0A2P9JYA1   A0A2S2PM36   A0A2H8U1C3   A0A1S5VFU4   A0A1S4F1W5   Q17HY6   A0A2U9NJG4   A0A182H4S6   A0A182G7V3   A0A2J7QQH3   A0A195BLH4   A0A2J7QQK8   A0A2J7QQK1   A0A2J7QQK6   A0A067QWX4   A0A310S5S6   A0A310S9P8   A0A1J1IX76   A0A2R7WBZ6   A0A182P838  

PDB

5EHS     E-value=8.12505e-29,     Score=309

KEGG

101744582    no KO assigned | (RefSeq) glutamate receptor ionotropic, kainate 2-like

GO

GO:0016021   GO:0004970   GO:0030054   GO:0045211   GO:0006811   GO:0035249   GO:0050804   GO:0005886   GO:1904315   GO:0008066   GO:0016020   GO:0005234   GO:0004872   GO:0005216   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

Subcellular location

  

Length:

109

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00319

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.21883

outside

1  -  109

 

 

Pi

380.489757

Theta

191.779782

Tajima's D

3.096758

CLR

0

CSRT

0.982250887455627

Interpretation

Uncertain