SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13752
Pre Gene Modal
BGIBMGA011526
Annotation
PREDICTED:_uncharacterized_protein_LOC106137584_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.974
 

Sequence

CDS
ATGTTACTTTTCAAGTTTGGGCTAATCATTTTATTTTCAACATTTATTACATCAATTTGTTTTCAAATACTTAAAGAAACAAATTCCTTGGATACTGGCCTTGCTTTTTTGTACATTGCCAGTGGGGCAATAGCTGGCAAAATCATTTATGACAGATATCAGCAAATTCAAATACTTGGTTCATTAACACCAAATCCAAATGTGACTTCCTTTGCAAACAGGATTGCTTCCTTTTCAGTCTCATTTATCTATTTGGGCTTTCTGATTTATGCATTTCTATTTTTATTTAAGGTTGATAACACTTTCATAATAGCACTTAATATTTTTATATGTGGATTTGGCACGTTATATATATGGATCCAGTGCATCATCACAACATATATTTCAACTCTATTCTATGATAAATTTTTACTATTGCTTCGGCAATGCCTTGCCAAAGTGAGCTTCCTAATAATGATTGTTATGGCAATATTTGGGACCATGGCATCGACTTTACCAGCAGGTGGTTCCGGCGTGATTTACTTCTGTTATATAACAACGTCTCTTTGCAGCAATTTGTCGGCTGCAATATTCTGTGTATTCATTCTTACTTTTCAAAGAGAATATCAGTATTTTTCCGAGGGATTGCGATCGGAATTACTGCTCGATGACGGCTGTTCTATGAACAATGGGTCATTGTCGGACATAGATAGTCTATTTGGTACTCAAGAGTTCACTTCTAGCACTGCCGTTATAAAGGGCAGCGTTAGACGCGATTTGAAATGTGATGTTAATGATAATAAGTTGAGTGACGATGATAGTAACGTAGGTGCTAATGAGAGTTACACCGATCCTGATCGTTCCGGTATACCCAATGTAGATACCAATCAAAGTTTAGTTCCTATAAACAACGAAATCGCTAACACTGAGAACGAAAAGTTGCTCAGTTTGTCTCTGTCGATACTGCTTGCCGCGTTGCTGCAGGCGGTGCGATGTTTCGCACAGTTCTTAGAGGACATTGTTGTTCCGCAAAGATAA
Protein
MLLFKFGLIILFSTFITSICFQILKETNSLDTGLAFLYIASGAIAGKIIYDRYQQIQILGSLTPNPNVTSFANRIASFSVSFIYLGFLIYAFLFLFKVDNTFIIALNIFICGFGTLYIWIQCIITTYISTLFYDKFLLLLRQCLAKVSFLIMIVMAIFGTMASTLPAGGSGVIYFCYITTSLCSNLSAAIFCVFILTFQREYQYFSEGLRSELLLDDGCSMNNGSLSDIDSLFGTQEFTSSTAVIKGSVRRDLKCDVNDNKLSDDDSNVGANESYTDPDRSGIPNVDTNQSLVPINNEIANTENEKLLSLSLSILLAALLQAVRCFAQFLEDIVVPQR

Summary

Pfam
PF10277   Frag1
Interpro
IPR019402   Frag1/DRAM/Sfk1       

Ontologies

Topology

Length:
338
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
138.09902
Exp number, first 60 AAs:
40.74766
Total prob of N-in:
0.98859
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  24
outside
25  -  33
TMhelix
34  -  50
inside
51  -  69
TMhelix
70  -  92
outside
93  -  101
TMhelix
102  -  124
inside
125  -  136
TMhelix
137  -  159
outside
160  -  173
TMhelix
174  -  196
inside
197  -  338
 
 

Population Genetic Test Statistics

Pi
289.755523
Theta
196.461298
Tajima's D
0.558364
CLR
1549.915834
CSRT
0.524473776311184
Interpretation
Uncertain
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