SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13748
Pre Gene Modal
BGIBMGA011523
Annotation
PREDICTED:_inhibitor_of_apoptosis_2_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.272
 

Sequence

CDS
ATGAATTATGAGACAAACAGACTCAATACGTTCACAAACTGGCCTGCTTTGGCTCCAGTGGATCCCATCAGAATAGCGAAGGCTGGTTTTTTCTACACTGGCCAAGGAATGGAAGTGCAATGTTTTAGTTGTGGTGGTAAAATTTCCGAGTGGAATTACGGAGATCAAGTTATGTGGCGACATCGTAGGATGGAACCAAATTGTACGTTTGTTGTGAATTCACAACTATCGGGTAATGTACCGATGGTATTAGGCCCTGAATGTCCTTCGACGGATGAGCTAGCCAGGTCTTGGTCGACTACAGATGATCAAAGTGATTTAGTTGAATCTACTGGAGACTATGGTGTTACTGAAGAAGATGAAATGTATAGGAGCGAAGCTTTGCGACTTCTTTCATTTAGTCATTGGGAGGATGATTCTGTATCTCGTGAAGCTCTCGTAAGTGCTGGTTTCTATCACATAGGCGGTGGACGTCTACGATGCGCATGGTGTGGGGGAGAGTTAGCTCCATTCAGACGATTCGGATCATTGGGTCGGCCACTTGAAGTCCATAGAATGTACTTCCCCCGATGCGCCCACGCTGCTGCACTTGAATCGGCACAACAGCCCTTTACTTTACCGACAGTTATGTCGTCACCGTCAAACACGCCCCCAATACAGTCACCACCAGAGACAGGCAATGATTCACAATCACAGTCTGCGGGAGCTGCCCACAACGAGCGACTCCTGAACATGGGCGGTACTTGGCGTACGTTAGGTGTTGTCAGCGGCGGAGCTAGATACCCTCAATACGCGTCACTGGCGTCACGACTGGCGACCTTCGACTCTTGGCCAACCGACAAACAGCAAACGCCTAAAGATCTATCAGAAGCAGGATTCTTTCACACCGGAACTGATGATCAGGTTCGCTGTTTCTACTGTGACGGTGGGCTCGGCAAGTGGGAGGCTGGCGACGCGCCGTGGACGGAGCACGCGCGCTGGTTCCCGCACTGCGGGTACGTGCTGCTCCTCAAGGGAAACGAATTCGTCGATGAGTGCCGAAACGACAATAATCGGAGAAATAATTCACGAGAAACTGGTGTTAGTTCGAGACGAAGAAATCCGGGCGTCAACTACCCGGTGACCGAGATTGAAGTCGAGGAGTGCATGGAGAGTCCAATAACGTTGGCGGCGCTGGGGGCGGGGCTCGACGTCGCGAGGGTGCGCCGAGCTATCCTGCAACGATTGAGATCAACAGGTACACCGTTCCAGACTTCAGAGGCACTGATTGATTCCGTACTAGACGCGCAACTAAACGAGGAAGCTTGGAGTACTAATTCGCAGTCCCAAAGCCTTTCGAGGCATTTGGCTGAAACGCTCAGAGGAATGGATTCAATACCAGGTATAGCACCGCAGTCGTGGGACAACAACCCGGATAGAGGCAGATCGCAAAGAGACGGTATATCTCCGTCGCTTACTGAAATCGAATCGAGGCGGTCTACCAGCCAACCGCGAACATTGCCACCGCGCAGGAACGTATCTGTTATCGATGACGACAGAACTGAGCCTCTGCATAAAGAGGAAAGCTTAACGTTGGAAGAAGAGAATAGACAGCTCAGAGAGGCAAGGCTGTGTAAAGTTTGTATGGATAACGAGGTGAGCGTGGTGTTCCTGCCGTGCGGGCACCTGGTGTCGTGCGCGAGGTGCGGCGCGGCGCTGAGCGCGTGCCCGCTGTGCCGCGGCGCCGTGCGCGCGCTCGTGCGTGCCTACCTCGCCTGA
Protein
MNYETNRLNTFTNWPALAPVDPIRIAKAGFFYTGQGMEVQCFSCGGKISEWNYGDQVMWRHRRMEPNCTFVVNSQLSGNVPMVLGPECPSTDELARSWSTTDDQSDLVESTGDYGVTEEDEMYRSEALRLLSFSHWEDDSVSREALVSAGFYHIGGGRLRCAWCGGELAPFRRFGSLGRPLEVHRMYFPRCAHAAALESAQQPFTLPTVMSSPSNTPPIQSPPETGNDSQSQSAGAAHNERLLNMGGTWRTLGVVSGGARYPQYASLASRLATFDSWPTDKQQTPKDLSEAGFFHTGTDDQVRCFYCDGGLGKWEAGDAPWTEHARWFPHCGYVLLLKGNEFVDECRNDNNRRNNSRETGVSSRRRNPGVNYPVTEIEVEECMESPITLAALGAGLDVARVRRAILQRLRSTGTPFQTSEALIDSVLDAQLNEEAWSTNSQSQSLSRHLAETLRGMDSIPGIAPQSWDNNPDRGRSQRDGISPSLTEIESRRSTSQPRTLPPRRNVSVIDDDRTEPLHKEESLTLEEENRQLREARLCKVCMDNEVSVVFLPCGHLVSCARCGAALSACPLCRGAVRALVRAYLA

Summary

EMBL
BABH01015194    BABH01015195    BABH01015196    GQ426297    ADM32523.1    ODYU01002254    + More
SOQ39500.1    NWSH01002058    PCG69284.1    KY514096    AUD12127.1    KQ459833    KPJ19812.1    KQ459601    KPI94024.1    MH200928    AXS59138.1    AGBW02008806    OWR52523.1    GECU01021262    JAS86444.1    GECU01026973    JAS80733.1    GECZ01019224    JAS50545.1    NEVH01012087    PNF30694.1    PNF30691.1    PNF30693.1    GEDC01018949    JAS18349.1    GEZM01020453    JAV89266.1    JN108872    KQ971312    AEQ93553.1    EEZ99286.1    KK854230    PTY13440.1    KK107347    EZA52248.1    QOIP01000007    RLU20359.1    KQ414617    KOC68081.1    GBHO01016502    GBRD01015606    JAG27102.1    JAG50220.1    GDHC01021118    JAP97510.1    NNAY01001909    OXU22592.1    ACPB03006767    KQ976424    KYM88604.1    AJWK01002077    KQ978983    KYN26817.1    GFDF01007524    JAV06560.1    HACA01000444    CDW17805.1    KF516634    AII16538.1    DQ307171    ABC25071.1    CCAG010009975    EZ423258    ADD19534.1    JXJN01002494    CH963849    EDW74402.1    CM000362    CM002911    EDX07264.1    KMY94105.1    JH430992    KK120738    KFM78917.1    CH477399    EAT41756.2    CM000158    EDW92022.1    UFQS01000042    UFQT01000042    SSW98317.1    SSX18703.1    UFQS01002793    UFQT01002793    SSX14681.1    SSX34078.1    IAAA01018954    LAA04566.1    CM000071    EAL26527.1    CH479252    EDW38685.1    CH902619    EDV37204.1    IAAA01018953    LAA04562.1    AABR07069023    BC083555    CH473993    AAH83555.1    EDL78521.1    GFAC01003728    JAT95460.1    ADMH02000540    ETN66039.1    AF183430    AAG22970.1    GFAA01003717    JAT99717.1    DS233428    EDS29932.1    GFDL01008037    JAV27008.1    AEYP01061514    JW863297    AFO95814.1    GACK01005887    JAA59147.1    KPU76649.1    GFDL01008005    JAV27040.1    GFDL01007944    JAV27101.1    GEDV01010312    JAP78245.1    ATLV01022681    KE525335    KFB47943.1    GBYX01225374    GBYX01225372    JAO70434.1    HADW01005723    HADX01009860    SBP07123.1    HAEB01015257    HAEC01002013    SBQ61784.1    HAEF01011795    HAEG01010786    SBR52954.1    AYCK01000596    HAEH01014207    HAEI01013388    SBS15857.1    HAED01007715    HAEE01013630    SBQ93927.1   
Pfam
PF00653   BIR        + More
PF00619   CARD
Interpro
IPR001841   Znf_RING        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR001370   BIR_rpt       
IPR017066   E3ligase_BOI-like       
IPR001315   CARD       
IPR041933   BIRC2/BIRC3_UBA       
IPR011029   DEATH-like_dom_sf       
IPR015940   UBA       
SUPFAM
SSF47986   SSF47986       
Gene 3D
PDB
3T6P     E-value=4.6949e-47,     Score=475

Ontologies

Topology

Length:
585
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0418599999999999
Exp number, first 60 AAs:
0.01439
Total prob of N-in:
0.00542
outside
1  -  585
 
 

Population Genetic Test Statistics

Pi
203.538238
Theta
194.702581
Tajima's D
-1.630745
CLR
14.872814
CSRT
0.0443477826108695
Interpretation
Possibly Positive selection
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