SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13746
Pre Gene Modal
BGIBMGA011522
Annotation
PREDICTED:_uncharacterized_protein_LOC101743563_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.977
 

Sequence

CDS
ATGCAAATGATTTTATACCGATCATTTGCGGTATCAACACGGGCAAGCATGGTGACACAGCTGAGAGCCGGTGACGATCTCGCCGCTCCAACAGGTTGCCTGCAGTACTTCGAAGAAGCGGAAGGTTCATTTGAATCATTCAACTATCAAGATAAATCCGATATAGCAATATCAACAAGGCCGGGCTATTTCAACAACCTAAACTATGCAATTTGTATAAAGCGAGCCGCGAAAGCCTGCGGCATCACGTACACTAACGTCGGGGATATGCAAATTGTAAATTACGATACAGATGGTCTACCGGTGATACCGCCTTATCAAGCAGGAGTGGAGATATTTGACTGCCCTAGCGATTGGCTACTAATTGCCGCTACAAGACTTTGCGGCGATCGTCTCAACGATGGTTCTGTGCTTCAAGACTTTTCCCTAAACGCTCCAGTGACAGGTTTACCAATCATTAGATTTGGATAA
Protein
MQMILYRSFAVSTRASMVTQLRAGDDLAAPTGCLQYFEEAEGSFESFNYQDKSDIAISTRPGYFNNLNYAICIKRAAKACGITYTNVGDMQIVNYDTDGLPVIPPYQAGVEIFDCPSDWLLIAATRLCGDRLNDGSVLQDFSLNAPVTGLPIIRFG

Summary

EMBL
BABH01015193    ODYU01002254    SOQ39498.1    KZ150490    PZC70693.1    KQ459833    + More
KPJ19810.1    NWSH01002058    PCG69286.1    KQ459601    KPI94026.1    RSAL01000002    RVE54925.1    AGBW02008806    OWR52521.1    PYGN01000152    PSN52667.1    NEVH01020933    PNF20685.1    AJVK01012077    JXUM01114046    KQ565747    KXJ70708.1    DS232427    EDS41637.1    CH477485    EAT40169.1    AJWK01003815    CH478110    EAT33927.1    DS235289    EEB14450.1    APCN01000946    ATLV01012451    KE524793    KFB36784.1    GEDC01020940    GEDC01003647    JAS16358.1    JAS33651.1    GEDC01018054    JAS19244.1    KQ971344    EFA05241.2    UFQS01001009    UFQT01001009    SSX08554.1    SSX28470.1    JRES01000342    KNC32085.1    GBXI01004744    JAD09548.1    UFQT01000234    SSX22153.1    JXJN01007782    CCAG010019322    CH933806    EDW14843.1    GDHF01002136    JAI50178.1    OUUW01000008    SPP83772.1    CH479185    EDW38515.1    CM000070    EAL29173.2    CM000160    KRK02840.1    CH954181    EDV48506.1    CM000364    EDX12353.1    CP012526    ALC46982.1    EDW96011.1    CH480840    EDW49486.1    AE014297    AAF55656.1    AHN57404.1    CH902617    EDV43396.2    CH916378    EDV98624.1    LJIJ01000053    ODN04163.1    CH940650    EDW68123.2    CH964272    EDW83807.2    GBHO01006507    JAG37097.1    QCYY01001383    ROT78424.1    MWRG01003952    PRD30957.1    MNPL01012316    OQR72208.1    CVRI01000028    CRK92436.1    NCKU01004782    NCKU01004778    RWS05444.1    RWS05453.1    NCKU01005711    RWS04237.1    NCKU01002122    RWS10365.1    ABJB010055564    ABJB010307077    ABJB010326616    ABJB010430901    ABJB010605439    ABJB010748771    ABJB010883392    ABJB010944745    DS926264    EEC17630.1    CAEY01002033    CAEY01001578    CAEY01001817    MWRG01005334    PRD29764.1    NCKU01000223    RWS16476.1    GDIP01045983    JAM57732.1    GDIQ01061686    GDIQ01007962    JAN33051.1    LRGB01002011    KZS09659.1    GDIQ01247680    JAK04045.1    CAEY01001941    GDIP01021609    JAM82106.1    GDIP01241062    JAI82339.1    JXLN01014368    KPM09997.1    MUJZ01052566    OTF73225.1    GL732594    EFX72931.1    MUJZ01017583    OTF80578.1    CH379070    EAL30269.2    CH477712    EAT36986.1    AGBW02009564    OWR50482.1   
Pfam
PF00431   CUB        + More
PF06702   Fam20C
PF06480   FtsH_ext
PF01494   FAD_binding_3
Interpro
IPR000859   CUB_dom        + More
IPR035914   Sperma_CUB_dom_sf       
IPR024869   FAM20       
IPR009581   FAM20_C       
IPR011546   Pept_M41_FtsH_extracell       
IPR002938   FAD-bd       
IPR036188   FAD/NAD-bd_sf       
SUPFAM
SSF49854   SSF49854        + More
SSF51905   SSF51905       
Gene 3D

Ontologies

Topology

Length:
156
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00495
Exp number, first 60 AAs:
0.00041
Total prob of N-in:
0.12166
outside
1  -  156
 
 

Population Genetic Test Statistics

Pi
254.634595
Theta
20.938034
Tajima's D
1.174743
CLR
0.590959
CSRT
0.712564371781411
Interpretation
Possibly Positive selection
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