Gene

KWMTBOMO13738

Pre Gene Modal

BGIBMGA010798

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]

Location

Bomo_Chr23(-):7984539-7986214      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.363

CDS

ATGGCCGGAACTTTAATGTCTAGTGATAGTGACAGTGATCTTGAAGTGCTGGAGCAGCTTTCAGATTGGGATAATGAGGATACTGATGGAGACGAAGGTCCATCAGGATCACGAAGAAGCTATTGCCGTATTGATTATACTCAGTGCCTAACTGATGCTGAATTTACATTTAGATTTCGTCTTAACAAAGCTGCGGTACAATTACTTTTATCGGAAATAATGCCACATGTAAAAGTAACCTGCAATCGAAATCATGGAGTTGCACCACTTCACCAGCTACTCCTAACCCTCCGATTTTATGCATTGGGTACAATGCTAATTTCTGTAGCGGATTTCGTGGGCGTGTCAAAATCGACCGCCAGCAGAATAGTTCACGATATATCTGGAGCTATAGCCATACTGTACAATAAATACATTGTAATGCACCCTAATCATGTGGACAAGTTTTTTCAATATGGTCAATTCCCACGTGTCCTGGGTGCAATTGACTGCACTCACATACGGATACAATCTCCAAATCACACAATAGGCGAAGAGTTCAGAAACCGAAAAGGCTACTTTTCATTAAATGTTCAAGCAGTTTGTGATGCTGATTTGAAGTTTATGAATGTTGTAGCCCGGTGGCCTGGTTCTGCACATGATGCTACTATATTTAATAATTCTGTTTTAAGAGAAAACATTCAGAAAGTTGTAATAGCTACAGCAGTTCTACACAACATCTGTAGAATTCATAACTTGCAAGAAACCCCAGCAGAGGTACAAATACCATTCCAAGCAATGGATGATGATGATCTTCAAACTATGGGAGTACAAGATAGCAGGGATAGAACAGAATTAATAGAAGCCTACTTCTCAACTCTGTAG

Protein

MAGTLMSSDSDSDLEVLEQLSDWDNEDTDGDEGPSGSRRSYCRIDYTQCLTDAEFTFRFRLNKAAVQLLLSEIMPHVKVTCNRNHGVAPLHQLLLTLRFYALGTMLISVADFVGVSKSTASRIVHDISGAIAILYNKYIVMHPNHVDKFFQYGQFPRVLGAIDCTHIRIQSPNHTIGEEFRNRKGYFSLNVQAVCDADLKFMNVVARWPGSAHDATIFNNSVLRENIQKVVIATAVLHNICRIHNLQETPAEVQIPFQAMDDDDLQTMGVQDSRDRTELIEAYFSTL

Uniprot

A0A0L7L248   A0A2A4IXD7   H9JFA0   A0A1Y1MBC4   A0A1Y1M7D0   A0A0L7LEJ9   + More
C4WUD0   A0A2S2NS44   J9JZ87   H9J5I1   A0A1Y1M620   A0A3S2LRZ4   J9L523   X1XA32   A0A1Y1MZ45   J9JXP4   N6TYP6   X1XI09   A0A1S3IAF8   J9LUG4   A0A2R2MN13   N6TRS6   S4PD89   A0A1S3JPJ3   A0A3S2KYY9   J9LCM8   J9JZI3  

Pubmed

26227816    19121390    28004739    23537049    23622113   

EMBL

JTDY01003471    KOB69505.1    NWSH01005652    PCG64078.1    BABH01027007    GEZM01038550    + More
JAV81615.1    GEZM01038551    JAV81614.1    JTDY01001465    KOB73799.1    ABLF02006541    ABLF02042859    AK341014    BAH71500.1    GGMR01007355    MBY19974.1    ABLF02036739    BABH01028201    GEZM01039795    GEZM01039794    GEZM01039793    GEZM01039792    GEZM01039791    GEZM01039790    GEZM01039789    JAV81183.1    RSAL01000314    RVE42625.1    ABLF02035722    ABLF02021397    GEZM01017851    GEZM01017841    GEZM01017840    JAV90428.1    ABLF02008545    APGK01005289    KB736163    ENN83248.1    ABLF02012281    ABLF02058185    ABLF02024993    ABLF02024998    ABLF02025000    APGK01006027    KB736544    ENN83189.1    GAIX01003761    JAA88799.1    RSAL01000416    RVE41817.1    ABLF02010299    ABLF02007265   

Proteomes

UP000037510    UP000218220    UP000005204    UP000007819    UP000283053    UP000019118    + More
UP000085678   

PRIDE

H9JFA0    H9J5I1   

Pfam

PF13359   DDE_Tnp_4

Interpro

IPR027806   HARBI1_dom        + More
IPR026103   HARBI1_animal       

ProteinModelPortal

A0A0L7L248   A0A2A4IXD7   H9JFA0   A0A1Y1MBC4   A0A1Y1M7D0   A0A0L7LEJ9   + More
C4WUD0   A0A2S2NS44   J9JZ87   H9J5I1   A0A1Y1M620   A0A3S2LRZ4   J9L523   X1XA32   A0A1Y1MZ45   J9JXP4   N6TYP6   X1XI09   A0A1S3IAF8   J9LUG4   A0A2R2MN13   N6TRS6   S4PD89   A0A1S3JPJ3   A0A3S2KYY9   J9LCM8   J9JZI3  

KEGG

105842545    K23222 nuclease HARBI1 [EC:3.1.-.-] | (RefSeq) putative nuclease HARBI1

GO

GO:0016021  

Length:

287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.21830000000001

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.04783

outside

1  -  287

 

 

Pi

119.247721

Theta

159.545897

Tajima's D

-0.928272

CLR

1.768982

CSRT

0.150392480375981

Interpretation

Uncertain