Silkworm Genome Informatics Database

Gene

KWMTBOMO13737

Pre Gene Modal

BGIBMGA002258

Annotation

PREDICTED:_uncharacterized_protein_LOC105841800_[Bombyx_mori]

Location

Bomo_Chr23(+):7982675-7984487 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.735 Nuclear Reliability : 1.729

CDS

ATGGAAAGTGTAAGTGCAATGGTATCAAGCAAGCCTCTCACAAAGGACGAGTCAAAAATACTGCTTTCGTTTATTGAAAGTAGTAAAATTATTTATAATAAAAGAACAAATGCGACTAATAACAAACTAAAAAATGAGGAGTGGAAACGCATAAGCGACCATTTCAATGCTGTGGTGACCACATCCTACCGGACACCACAGCAGTTGCGTTTAAAATGGGAAAATCTCAAAAAGAATTCCCGTAAACGCAATACACAAATACGTATGAATAACATAAAGACTGGTGGTGGTGGTCCTTCCTACATCCCCCCTGATGATGTGTTGGACAGGGTGGCTGCATTATTAGGAAGTACTGTAGATGGTTTCACAGTAGCATATGGTGGTGATGCTGAACTAATACCATGTGCCGGCAGTAGTAATGGTGGTGGTGATGAACATGGTTTGGAGGGTGTTATAGATAATGTAATTGATAATGGTGCTGAGGTGTTGGAGTGTAACAGTGGTGTTGAGGTGTTGAAAGAGTGTGTGGTCGAAGACACAGGGCCTTGCTCAGTCACACCACCTAACCCCAAATTTTTACACACTCCCAAAGCCAGCGGTTTCAAAAGAAAATCAAAATTTGACGAGCACCGGGCATCCAGAAACCAGGCAATAGCTAATTACTATAATGCAAAAAGTAAACTTTTAGAAGCAAAATTTGAAAATATTGTGTTAGAAAATAAAAAATTAAAATTAGAAATTGAAAAACTTAAGAATGTAAATTAA

Protein

MESVSAMVSSKPLTKDESKILLSFIESSKIIYNKRTNATNNKLKNEEWKRISDHFNAVVTTSYRTPQQLRLKWENLKKNSRKRNTQIRMNNIKTGGGGPSYIPPDDVLDRVAALLGSTVDGFTVAYGGDAELIPCAGSSNGGGDEHGLEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGPCSVTPPNPKFLHTPKASGFKRKSKFDEHRASRNQAIANYYNAKSKLLEAKFENIVLENKKLKLEIEKLKNVN

Uniprot

A0A2A4IVT0 S4PY81 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A151IKX4 + More
A0A1Y1K0T4 A0A1Y1K3J7 A0A3S2N9K0

Pubmed

23622113 26227816 19121390 28004739

EMBL

NWSH01005652 PCG64077.1 GAIX01003748 JAA88812.1 JTDY01001465 KOB73800.1 + More
BABH01028201 RSAL01000086 RVE48309.1 KQ977156 KYN05248.1 GEZM01096181 JAV55079.1 GEZM01096180 JAV55081.1 RSAL01000416 RVE41818.1

Proteomes

UP000218220 UP000037510 UP000005204 UP000283053 UP000078542

PRIDE

H9J5F6

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR026753   NAIF1        + More
IPR028002   Myb_DNA-bind_5
IPR017877   Myb-like_dom

ProteinModelPortal

A0A2A4IVT0 S4PY81 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A151IKX4 + More
A0A1Y1K0T4 A0A1Y1K3J7 A0A3S2N9K0

KEGG

105841800 no KO assigned | (RefSeq) uncharacterized LOC105841800

GO

GO:0005634 GO:0006915 GO:0003677 GO:0003676 GO:0031625 GO:0005515 GO:0000287 GO:0016620 GO:0016787 GO:0016491 GO:0015930

PANTHER

PTHR23098

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00137

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.03295

outside

1 - 254

Pi

110.502341

Theta

170.212217

Tajima's D

-1.151904

CLR

3.431585

CSRT

0.109194540272986

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree