Silkworm Genome Informatics Database

Gene

KWMTBOMO13735

Pre Gene Modal

BGIBMGA002258

Annotation

PREDICTED:_uncharacterized_protein_LOC105841800_[Bombyx_mori]

Location

Bomo_Chr23(+):7978435-7979809 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.348 Nuclear Reliability : 1.602

CDS

ATGGAAAGTGTAAGTGCAATGGTATCAAGCAAGCCTCTCACAAAGGACGAGTCAAAAATACTGCTTTCGTTTATTGAAAGTAGTAAAATTATTTATAATAAAAGAACAAATGCGACTAATAACAAACTAAAAAATGAGGAGTGGAAACGCATAAGCGACCATTTCAATGCTGTGGTGACCACATCCTACCGGACACCACAGCAGTTGCGTTTAAAATGGGAAAATCTCAAAAAGAATTCCCGTAAACGCAATACACAAATACGTATGAATAACATAAAGACTGGTGGTGGTGGTCCTTCCTACATCCCCCCTGATGATGTGTTGGACAGGGTGGCTGCATTATTAGGAAGTACTGTAGATGGTTTCACAGTAGCATATGGTGGTGATGCTGAACTAATACCATGTGCCGGCAGTAGTAATGGTGGTGGTGATGAACATGGTTTGGAGGGTGTTATAGATAATGTAATTGATAATGGTGCTGAGGTGTTGGAGTGTAACAGTGGTGTTGAGGTGTTGAAAGAGTGTGTGGTCGAAGACACAGGGCCTTGCTCAGTCACACCACCTAACCCCAAATTTTTACACACTCCCAAAGCCAGCGGTAAATTATTTTGTTAA

Protein

MESVSAMVSSKPLTKDESKILLSFIESSKIIYNKRTNATNNKLKNEEWKRISDHFNAVVTTSYRTPQQLRLKWENLKKNSRKRNTQIRMNNIKTGGGGPSYIPPDDVLDRVAALLGSTVDGFTVAYGGDAELIPCAGSSNGGGDEHGLEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGPCSVTPPNPKFLHTPKASGKLFC

Uniprot

A0A2A4IVT0 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A151IKX4 J9M2S8 + More
A0A1Y1K0T4 A0A1Y1K0Z0 A0A1Y1K3J7 A0A3S2N9K0 A0A3S2PJN2

Pubmed

26227816 19121390 28004739

EMBL

NWSH01005652 PCG64077.1 JTDY01001465 KOB73800.1 BABH01028201 RSAL01000086 + More
RVE48309.1 KQ977156 KYN05248.1 ABLF02011053 GEZM01096181 JAV55079.1 GEZM01096179 JAV55083.1 GEZM01096180 JAV55081.1 RSAL01000416 RVE41818.1 RSAL01000013 RVE53390.1

Proteomes

UP000218220 UP000037510 UP000005204 UP000283053 UP000078542 UP000007819 + More

PRIDE

H9J5F6

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR026753   NAIF1        + More
IPR028002   Myb_DNA-bind_5
IPR017877   Myb-like_dom

ProteinModelPortal

A0A2A4IVT0 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A151IKX4 J9M2S8 + More
A0A1Y1K0T4 A0A1Y1K0Z0 A0A1Y1K3J7 A0A3S2N9K0 A0A3S2PJN2

KEGG

105841800 no KO assigned | (RefSeq) uncharacterized LOC105841800

GO

GO:0005634 GO:0006915 GO:0003677 GO:0003676 GO:0031625 GO:0005515 GO:0000287 GO:0016620 GO:0016787 GO:0016491 GO:0015930

PANTHER

PTHR23098

Length:

204

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00233

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.05595

outside

1 - 204

Pi

153.680139

Theta

176.224724

Tajima's D

-1.178472

CLR

1.239665

CSRT

0.108744562771861

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree