Gene

KWMTBOMO13734

Pre Gene Modal

BGIBMGA011496

Annotation

PREDICTED:_transmembrane_protein_127-like_[Papilio_machaon]

Location

Bomo_Chr23(-):7953426-7956374      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.722

CDS

ATGGGTTGCCTTTCGTGGATTCGAGAATTTAAAATGCCCTTTTCTTTTAAGGACAAAGAGTTAAATAAAATTGCAGCATTCTTCAACATCACTACTTTTCTGCTAACCTGTGCAGCTTTAGTACAACCCAGCTGGTTCCGTATTAGAGGACTTCATTGTACACAGAGTTTGGCATTAACTCAGTTTTTTTCATTTGATGGTGATGACGACTTAGGTGAAGATGATCAGATAAATATACATCAAGATAGCATTTTTAACCAAAAAATTGAGTTTGATAAAAGTCTCCCTCCATGTAAAACTGCAGCAACTATAACACTTATGCGAGTACTTATTTTACTGTGTTTCATGGTGCTACTGTGTTCATGTATTGGTGCAATCATCAATATTACAAGCTTTAATAGTAAAGCTATAAAATTGTTGAGAAGAAACGCCATTCCAAGCATACTGTGTGTATTCTGGGTGATAGCCATTGTCGGTGTTTGTTATTATACAACTGTTCTGCTGGGAAATACAAATAACAGTGATCCGAACATGATACAAGTCGATTATGAATATGGATTTTATACTATTACTGCAGCAGGTGCTATGGCCTTATTAGCTTCAGCAGCTAATTTATGGGGTGCACCTTTATCTAGTGATGAAGATATCCAAAGACGGAATTTAATGGAAGACTGGGATGGATATGAAGCTCACAGTGTTGGCCCCACTCCTGCTGTACCAACCTTACCTCCTTATACTCCAAGTCCAGACTACGTACACATATTGTCAACTGCATATGCACCTCCAGTACTGGGAAGTCAACAATATTTTCCATTCGATGATCTCTCTGTACTTCCTCCTCCACCACCTTACACACCATAA

Protein

MGCLSWIREFKMPFSFKDKELNKIAAFFNITTFLLTCAALVQPSWFRIRGLHCTQSLALTQFFSFDGDDDLGEDDQINIHQDSIFNQKIEFDKSLPPCKTAATITLMRVLILLCFMVLLCSCIGAIINITSFNSKAIKLLRRNAIPSILCVFWVIAIVGVCYYTTVLLGNTNNSDPNMIQVDYEYGFYTITAAGAMALLASAANLWGAPLSSDEDIQRRNLMEDWDGYEAHSVGPTPAVPTLPPYTPSPDYVHILSTAYAPPVLGSQQYFPFDDLSVLPPPPPYTP

Uniprot

H9JPP1   A0A2A4JD39   A0A2H1WAG6   A0A194PM19   A0A194RR64   A0A3S2LJ13   + More
A0A1E1W1T3   A0A0L7L898   A0A212FJQ2   A0A2J7Q4P7   A0A067RF82   A0A1B6GPG2   A0A1B6IVI7   A0A1B6CU58   A0A0P4VQQ1   R4G2T3   A0A0A9XDS3   A0A1B6LFB7   A0A0V0GDE5   A0A224XWB6   A0A1S3DAX5   A0A023F8M1   T1IIZ6   A0A2R7WIT8   A0A3Q0J582   A0A293LRB0   V4AQ08   A0A2R5LEV4   W4ZFK7   A0A3M7SN56   A0A210PP59   A0A0L8IG71   A0A1W2W627   A0A1S3KDH2  

Pubmed

19121390    26354079    26227816    22118469    24845553    27129103    + More
25401762    26823975    25474469    23254933    30375419    28812685   

EMBL

BABH01015166    NWSH01001920    PCG69676.1    ODYU01007351    SOQ50040.1    KQ459601    + More
KPI94033.1    KQ459833    KPJ19800.1    RSAL01000002    RVE54912.1    GDQN01010118    JAT80936.1    JTDY01002289    KOB71733.1    AGBW02008253    OWR53939.1    NEVH01018378    PNF23554.1    KK852672    KDR18783.1    GECZ01005469    JAS64300.1    GECU01024918    GECU01020096    GECU01016856    JAS82788.1    JAS87610.1    JAS90850.1    GEDC01020361    GEDC01007454    GEDC01000900    JAS16937.1    JAS29844.1    JAS36398.1    GDKW01003113    JAI53482.1    ACPB03005323    GAHY01002321    JAA75189.1    GBHO01028361    GBHO01028360    GBHO01028359    GBHO01028358    GBRD01012172    GDHC01018226    GDHC01006277    JAG15243.1    JAG15244.1    JAG15245.1    JAG15246.1    JAG53652.1    JAQ00403.1    JAQ12352.1    GEBQ01030242    GEBQ01017601    GEBQ01009682    JAT09735.1    JAT22376.1    JAT30295.1    GECL01000765    JAP05359.1    GFTR01004175    JAW12251.1    GBBI01000971    JAC17741.1    AFFK01014253    JH430212    KK854891    PTY19543.1    GFWV01005856    MAA30586.1    KB201362    ESO96850.1    GGLE01003937    MBY08063.1    AAGJ04092413    REGN01001064    RNA37254.1    NEDP02005569    OWF38285.1    KQ415798    KOG00458.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000283053    UP000037510    + More
UP000007151    UP000235965    UP000027135    UP000015103    UP000079169    UP000030746    UP000007110    UP000276133    UP000242188    UP000053454    UP000085678   

PRIDE

H9JPP1   

Pfam

PF13903   Claudin_2

Interpro

IPR033331   TMEM127        + More
IPR004031   PMP22/EMP/MP20/Claudin       

ProteinModelPortal

H9JPP1   A0A2A4JD39   A0A2H1WAG6   A0A194PM19   A0A194RR64   A0A3S2LJ13   + More
A0A1E1W1T3   A0A0L7L898   A0A212FJQ2   A0A2J7Q4P7   A0A067RF82   A0A1B6GPG2   A0A1B6IVI7   A0A1B6CU58   A0A0P4VQQ1   R4G2T3   A0A0A9XDS3   A0A1B6LFB7   A0A0V0GDE5   A0A224XWB6   A0A1S3DAX5   A0A023F8M1   T1IIZ6   A0A2R7WIT8   A0A3Q0J582   A0A293LRB0   V4AQ08   A0A2R5LEV4   W4ZFK7   A0A3M7SN56   A0A210PP59   A0A0L8IG71   A0A1W2W627   A0A1S3KDH2  

KEGG

101741506    no KO assigned | (RefSeq) uncharacterized LOC101741506

GO

GO:0032007   GO:0016021   GO:0008285  

PANTHER

PTHR28358  

Length:

286

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.3685400000001

Exp number, first 60 AAs:

22.0456

Total prob of N-in:

0.90082

POSSIBLE N-term signal

sequence

inside

1  -  23

TMhelix

24  -  46

outside

47  -  108

TMhelix

109  -  131

inside

132  -  143

TMhelix

144  -  166

outside

167  -  185

TMhelix

186  -  208

inside

209  -  286

 

 

Pi

72.664554

Theta

68.520239

Tajima's D

-0.564345

CLR

0.695204

CSRT

0.230788460576971

Interpretation

Uncertain