Gene

KWMTBOMO13733

Pre Gene Modal

BGIBMGA011514

Annotation

PREDICTED:_nuclear_receptor-binding_factor_2-like_[Papilio_polytes]

Location

Bomo_Chr23(+):7944945-7945964      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.731

CDS

ATGGAATCTCATCCACTAAACTTGGCACATCAGCAACATCGTCGTGCTGAAGCTCACTTGAAGAATCACAGATATGATGAAGCAATGCAATGTCATCAAAGTGCTGCCGAACTTCTTGTTGATGCAATGAAGTTAACGACTTCTACTTTGGCTTTAGAGGCTATTACGCTGCAACACAGCTATCACTTAAAACAAAAAGATTTAATAAAGTACAAAAAAGAGCAATATGTCAGAGTTAAAAAAGCCATGGATACAATTAAGCGGTTAGGAAAAGAACCAATATCTAATCTTCAAGGTCATGACTATGCTCAACTTCAAATAGCAATTTACAGAGCAATCAATGAAACTGACTCCTTACTTCATATTTTGAGAACAACTGATGAGACTTCTGAAACTGGAACTTCAGAAGAAATATTGACTAAGGATGTTGTTGATGGGAAACGAACAGAAAAAACTCAAGCAACTGCAGTAGAAGAGTTGACAATACTAAGTCAAAACCTACACTCACTTGTGGAACAACTTGTTTTACAAGTTGAAGTACTAAAAGACGAAAATGCTACTTTGAAAGAAAAAGTTAATTATTTAGAAAAAGAAAGGGCAAAATATTTGAATCTTGGCATGTCCAGTAATGATTTATCTTTTAATTTTACTTCACTAAGTATATCAAATGATATTTCTAATGAGGTTAATGAAAGACCATTAATTTTGAAACCATTTGAAGATAACAAAACTTGA

Protein

MESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMKLTTSTLALEAITLQHSYHLKQKDLIKYKKEQYVRVKKAMDTIKRLGKEPISNLQGHDYAQLQIAIYRAINETDSLLHILRTTDETSETGTSEEILTKDVVDGKRTEKTQATAVEELTILSQNLHSLVEQLVLQVEVLKDENATLKEKVNYLEKERAKYLNLGMSSNDLSFNFTSLSISNDISNEVNERPLILKPFEDNKT

Uniprot

H9JPQ9   A0A2A4JC73   A0A0L7L8A3   A0A1E1WVD5   A0A2H1WAC3   A0A194RQX4   + More
A0A194PMS5   A0A212FJM1   A0A0T6AZY0   A0A1Y1LXR7   A0A1W4WYU5   A0A1Y1LWJ1   A0A1B6CK25   A0A1W4WZV6   A0A1W4WP38   A0A182XHW1   A0A182HSU3   A0A0P4VLQ1   A0A182VIT1   A0A0V0G8K3   A0A182LEX5   Q7PGI4   A0A182NRQ6   A0A182RGV8   A0A069DPM2   A0A182VWS7   A0A182P968   A0A182QRN8   A0A182H8V7   A0A1Q3FC64   A0A182U969   Q174N3   W5J4V7   D6WB19   A0A067R5Z8   A0A182YRH1   A0A182SMK2   A0A2M4AYC5   A0A182FRI5   A0A2M4BYC3   A0A2J7Q4P2   A0A2J7Q4P9   A0A2M3ZDR3   A0A2M3ZK24   V3ZPS6   A0A084VAR2   B0X118   A0A182M1J9   A0A182JZU8   A0A3P8VRT0   A0A0K8TNI1   W5UC66   A0A3P8YM01   A0A3S2PFS7   A0A3Q2CN77   A0A3B5KYB1   A0A3Q3VLH2  

Pubmed

19121390    26227816    26354079    22118469    28004739    27129103    + More
20966253    12364791    14747013    17210077    26334808    26483478    17510324    20920257    23761445    18362917    19820115    24845553    25244985    23254933    24438588    24487278    26369729    23127152    25069045   

EMBL

BABH01015165    NWSH01001920    PCG69675.1    JTDY01002289    KOB71732.1    GDQN01000106    + More
JAT90948.1    ODYU01007351    SOQ50039.1    KQ459833    KPJ19799.1    KQ459601    KPI94034.1    AGBW02008253    OWR53938.1    LJIG01016422    KRT80648.1    GEZM01045146    JAV77901.1    GEZM01045145    JAV77902.1    GEDC01023570    GEDC01012944    JAS13728.1    JAS24354.1    APCN01000361    GDKW01002981    JAI53614.1    GECL01001657    JAP04467.1    AAAB01008859    EAA44921.2    GBGD01002876    JAC86013.1    AXCN02000008    JXUM01119459    KQ566292    KXJ70255.1    GFDL01009898    JAV25147.1    CH477408    EAT41522.1    ADMH02002105    ETN58981.1    KQ971311    EEZ98980.2    KK852672    KDR18784.1    GGFK01012472    MBW45793.1    GGFJ01008873    MBW58014.1    NEVH01018378    PNF23555.1    PNF23558.1    GGFM01005894    MBW26645.1    GGFM01008176    MBW28927.1    KB203854    ESO82856.1    ATLV01004137    KE524190    KFB35056.1    DS232250    EDS38410.1    AXCM01001347    GDAI01001651    JAI15952.1    JT410751    AHH39179.1    CM012455    RVE60019.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000192223    UP000076407    UP000075840    UP000075903    UP000075882    UP000007062    UP000075884    UP000075900    UP000075920    UP000075885    UP000075886    UP000069940    UP000249989    UP000075902    UP000008820    UP000000673    UP000007266    UP000027135    UP000076408    UP000075901    UP000069272    UP000235965    UP000030746    UP000030765    UP000002320    UP000075883    UP000075881    UP000265120    UP000221080    UP000265140    UP000265020    UP000261380    UP000261620   

PRIDE

H9JPQ9   

Pfam

PF17169   NRBF2_MIT        + More
PF08961   NRBF2

Interpro

IPR033393   NRBF2_MIT        + More
IPR039679   NRBF2       
IPR015056   NRBF2_C       

ProteinModelPortal

H9JPQ9   A0A2A4JC73   A0A0L7L8A3   A0A1E1WVD5   A0A2H1WAC3   A0A194RQX4   + More
A0A194PMS5   A0A212FJM1   A0A0T6AZY0   A0A1Y1LXR7   A0A1W4WYU5   A0A1Y1LWJ1   A0A1B6CK25   A0A1W4WZV6   A0A1W4WP38   A0A182XHW1   A0A182HSU3   A0A0P4VLQ1   A0A182VIT1   A0A0V0G8K3   A0A182LEX5   Q7PGI4   A0A182NRQ6   A0A182RGV8   A0A069DPM2   A0A182VWS7   A0A182P968   A0A182QRN8   A0A182H8V7   A0A1Q3FC64   A0A182U969   Q174N3   W5J4V7   D6WB19   A0A067R5Z8   A0A182YRH1   A0A182SMK2   A0A2M4AYC5   A0A182FRI5   A0A2M4BYC3   A0A2J7Q4P2   A0A2J7Q4P9   A0A2M3ZDR3   A0A2M3ZK24   V3ZPS6   A0A084VAR2   B0X118   A0A182M1J9   A0A182JZU8   A0A3P8VRT0   A0A0K8TNI1   W5UC66   A0A3P8YM01   A0A3S2PFS7   A0A3Q2CN77   A0A3B5KYB1   A0A3Q3VLH2  

PDB

4ZEY     E-value=7.72646e-08,     Score=133

KEGG

101741647    K21246 nuclear receptor-binding factor 2 | (RefSeq) nuclear receptor-binding factor 2

PATHWAY

04140    Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0006914  

PANTHER

PTHR14964  

Length:

244

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00695999999999999

Exp number, first 60 AAs:

0.00612

Total prob of N-in:

0.01634

outside

1  -  244

 

 

Pi

304.596377

Theta

202.990743

Tajima's D

1.573983

CLR

0

CSRT

0.806509674516274

Interpretation

Uncertain