Gene

KWMTBOMO13730

Pre Gene Modal

BGIBMGA011512

Annotation

PREDICTED:_protein_TAPT1_homolog_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr23(+):7724245-7734019      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.62

CDS

ATGCTGGAAGTTGGTGATAGACTGTTCTCAGCTTTTGGCCAAGATACAATTGATGCTTTGTTCTGGACAGCGACAGAACCAAGAGACAGAAGAAGGGAACATTTAGGAGTTATTCCGCATTTATTATTTGCAATGACCTATGTTTTTTTACACAGTATTTTGGTGCTATTCCAGGCTACAACACTTAATGTAGCGTTTAATTCAAATAACAAAAGTCTTCTGATCATTATGATGTCAAATAATTTTGTAGAGCTAAAAGGAAGTGTCTTCAAGAAATTCGATAAGAACAATTTGTTTCAAGTGTCCTGCAGTGATGTCCGAGAAAGATTACATCTTTCTGTACTTCTTTTCATAGTAGTTTTACAAACCATGAAGGAATATATGTGGAAAGAGGAAAGGTTTTGGATTCTGGCACCTGATTGTATACTTGTACTAACTTTTGAAGTTATTATTGATTGGGTGAAACATGCCTTTATAACCAGATTTAATGAAATTCCATACGGAGTGTACAGGGAGTACACTGTCAGTTTGGCATATGATGTAGCACAAACAAGACAAAAGTATGCCTTTTCTGATCATTCTGACTTGGTCGCTAGGAGGATGGGTTTCATTCCATTACCTCTAGGTGTTGTAATAACACGAGTTTTGGTACACGCTGTCAAAGTTGATGGATTTCCAGCATTCCTTTTGATATTAATTGCATATTTATGCTTGATATCGCTAAGAGTGCTTGTATCCATCGTAATACTGGGTAAAGCCTGCGACTTAATCGTTCTACACCAATCTGAAAAGAATGAAAGCCATCACACCACACCGAAAAGGGAACAGAGAGATTTCTATGCTAGAGAATCTCCATGTACTCCTAAAGCCGCAGAAGTTGTCGTGGAACCGCAAAAAAAATCGGTACAGCTTAAATTTGTTATTCCAGAGAACACTATTTTGGCAGAGCCACTTGTGGACGCCTCAGTCGGTGCTGCGGCTATTTTCTCTAATAGTGCCATCGACTTGAATGGTGTTTGTTATCTCAATGACAAAATGAATGCACAAATAAAGCAGGAAGTTACAGATTATCTCGAGTCCGAAGTGGTGGATTTAAGTAGAAGCGCTCCAGATATAAAGGCCGCTGCGGGCGCAGAGACCCAGCCCGAGGAGGAGCGTCCGCTCTCGCCGGACGCCGAGGGTCTCAAACGTCGATCTGAATCCGAACCAAACCTTGTGAAGCCAGAAGACGAAACAGCATTGAGCGAATTTTAA

Protein

MLEVGDRLFSAFGQDTIDALFWTATEPRDRRREHLGVIPHLLFAMTYVFLHSILVLFQATTLNVAFNSNNKSLLIIMMSNNFVELKGSVFKKFDKNNLFQVSCSDVRERLHLSVLLFIVVLQTMKEYMWKEERFWILAPDCILVLTFEVIIDWVKHAFITRFNEIPYGVYREYTVSLAYDVAQTRQKYAFSDHSDLVARRMGFIPLPLGVVITRVLVHAVKVDGFPAFLLILIAYLCLISLRVLVSIVILGKACDLIVLHQSEKNESHHTTPKREQRDFYARESPCTPKAAEVVVEPQKKSVQLKFVIPENTILAEPLVDASVGAAAIFSNSAIDLNGVCYLNDKMNAQIKQEVTDYLESEVVDLSRSAPDIKAAAGAETQPEEERPLSPDAEGLKRRSESEPNLVKPEDETALSEF

Uniprot

A0A2A4J823   A0A3S2L3L0   A0A194RR59   A0A1E1WA45   A0A212FJL3   A0A194PM24   + More
A0A0N1INF9   S4PC12   A0A2J7Q4K3   A0A067R697   A0A1B6CG65   V5GMI6   A0A139WNU1   A0A1W4X088   A0A1B6J1R2   A0A1W4WP78   A0A0A9Y4K5   A0A1B6ENU0   A0A1B6JC50   A0A069DW66   A0A1Y1NDC6   A0A1B6K9F4   A0A224XH98   E0VJ71   A0A182G0L7   U5EVF9   A0A1Q3FXG3   A0A1Q3FXB9   A0A182XIS9   Q7QCR6   A0A182HTI7   A0A182V7M5   A0A336JWR6   A0A182XUY7   A0A084W347   A0A182JZ09   A0A182J9C8   A0A182PE05   A0A1L8D940   A0A182TAK3   W5JUP6   A0A182VRU2   A0A1W4U8H1   A0A182THH8   A0A182LBX3   A0A182F718   A0A182N7B8   A0A2M4AJX3   A0A2M4AK05   A0A182LRS0   A0A1B0DA33   A0A0Q9X1H0   A0A0K8V7X9   A0A0K8TMR0   A0A0K8WD05   A0A026WF75   A0A034W8G5   A0A3L8DH42   A0A088A3F2   W8C9L2   A0A0P8YMH3   A0A0Q9WEX1   A0A0R1E5Z4   A0A0L7REA6   A0A2S2N8V0   A0A0M3QXT6   I7M5V8   A0A182RPE2   J9K7S7   A0A3B0KEG8   A0A0Q9X731   A0A1J1IG23   A0A1J1IG34   F4W6N3   V5H8I1   A0A293MFZ3  

Pubmed

26354079    22118469    23622113    24845553    18362917    19820115    + More
25401762    26823975    26334808    28004739    20566863    26483478    12364791    14747013    17210077    25244985    24438588    20920257    23761445    20966253    17994087    26369729    24508170    25348373    30249741    24495485    17550304    15632085    21719571    25765539   

EMBL

NWSH01002449    PCG68277.1    RSAL01000184    RVE44834.1    KQ459833    KPJ19795.1    + More
GDQN01007239    JAT83815.1    AGBW02008253    OWR53933.1    KQ459601    KPI94038.1    KQ458531    KPJ05839.1    GAIX01008055    JAA84505.1    NEVH01018378    PNF23511.1    KK852672    KDR18785.1    GEDC01024963    GEDC01023577    JAS12335.1    JAS13721.1    GALX01003152    JAB65314.1    KQ971311    KYB29435.1    GECU01014610    JAS93096.1    GBHO01017556    GDHC01011909    GDHC01010095    GDHC01008506    JAG26048.1    JAQ06720.1    JAQ08534.1    JAQ10123.1    GECZ01030173    JAS39596.1    GECU01027457    GECU01010961    JAS80249.1    JAS96745.1    GBGD01000982    JAC87907.1    GEZM01006549    JAV95729.1    GEBQ01031900    JAT08077.1    GFTR01007238    JAW09188.1    DS235219    EEB13426.1    JXUM01134762    KQ568171    KXJ69113.1    GANO01001879    JAB57992.1    GFDL01002903    JAV32142.1    GFDL01002953    JAV32092.1    AAAB01008859    EAA07820.4    APCN01000536    UFQS01000012    UFQT01000012    SSW97216.1    SSX17602.1    ATLV01019815    KE525279    KFB44641.1    GFDF01011116    JAV02968.1    ADMH02000081    ETN67871.1    GGFK01007762    MBW41083.1    GGFK01007763    MBW41084.1    AXCM01004364    AJVK01028750    CH964232    KRF99379.1    GDHF01017471    JAI34843.1    GDAI01002393    JAI15210.1    GDHF01003246    JAI49068.1    KK107274    EZA53659.1    GAKP01008360    JAC50592.1    QOIP01000008    RLU19765.1    GAMC01006546    JAC00010.1    CH902617    KPU80015.1    CH940650    KRF83101.1    CM000160    KRK02759.1    KQ414612    KOC69154.1    GGMR01001034    MBY13653.1    CP012526    ALC46493.1    CM000070    EAL29107.1    ABLF02038837    OUUW01000007    SPP83441.1    CH933806    KRG00606.1    CVRI01000049    CRK99215.1    CRK99213.1    GL887707    EGI70109.1    GANP01013591    JAB70877.1    GFWV01013321    MAA38050.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    UP000235965    + More
UP000027135    UP000007266    UP000192223    UP000009046    UP000069940    UP000249989    UP000076407    UP000007062    UP000075840    UP000075903    UP000076408    UP000030765    UP000075881    UP000075880    UP000075885    UP000075901    UP000000673    UP000075920    UP000192221    UP000075902    UP000075882    UP000069272    UP000075884    UP000075883    UP000092462    UP000007798    UP000053097    UP000279307    UP000005203    UP000007801    UP000008792    UP000002282    UP000053825    UP000092553    UP000001819    UP000075900    UP000007819    UP000268350    UP000009192    UP000183832    UP000007755   

Pfam

PF05346   DUF747        + More
PF00400   WD40
PF16699   CSTF1_dimer
PF12894   ANAPC4_WD40
PF00069   Pkinase
PF17047   SMP_LBD
PF00168   C2

Interpro

IPR008010   Tatp1        + More
IPR019775   WD40_repeat_CS       
IPR038184   CSTF1_dimer_sf       
IPR032028   CSTF1_dimer       
IPR036322   WD40_repeat_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR024977   Apc4_WD40_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR017441   Protein_kinase_ATP_BS       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000008   C2_dom       
IPR031468   SMP_LBD       
IPR039010   Synaptotagmin_SMP       
IPR037752   C2C_KIAA1228       
IPR004827   bZIP       
IPR035892   C2_domain_sf       
IPR037749   Ext_Synaptotagmin_C2B       
IPR037733   Ext_Synaptotagmin_C2A       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF56112   SSF56112       

Gene 3D

1.20.960.50     2.130.10.10     2.60.40.150    

CDD

cd04030  C2C_KIAA1228
cd04050  C2B_Synaptotagmin-like
cd08391  C2A_C2C_Synaptotagmin_like

ProteinModelPortal

A0A2A4J823   A0A3S2L3L0   A0A194RR59   A0A1E1WA45   A0A212FJL3   A0A194PM24   + More
A0A0N1INF9   S4PC12   A0A2J7Q4K3   A0A067R697   A0A1B6CG65   V5GMI6   A0A139WNU1   A0A1W4X088   A0A1B6J1R2   A0A1W4WP78   A0A0A9Y4K5   A0A1B6ENU0   A0A1B6JC50   A0A069DW66   A0A1Y1NDC6   A0A1B6K9F4   A0A224XH98   E0VJ71   A0A182G0L7   U5EVF9   A0A1Q3FXG3   A0A1Q3FXB9   A0A182XIS9   Q7QCR6   A0A182HTI7   A0A182V7M5   A0A336JWR6   A0A182XUY7   A0A084W347   A0A182JZ09   A0A182J9C8   A0A182PE05   A0A1L8D940   A0A182TAK3   W5JUP6   A0A182VRU2   A0A1W4U8H1   A0A182THH8   A0A182LBX3   A0A182F718   A0A182N7B8   A0A2M4AJX3   A0A2M4AK05   A0A182LRS0   A0A1B0DA33   A0A0Q9X1H0   A0A0K8V7X9   A0A0K8TMR0   A0A0K8WD05   A0A026WF75   A0A034W8G5   A0A3L8DH42   A0A088A3F2   W8C9L2   A0A0P8YMH3   A0A0Q9WEX1   A0A0R1E5Z4   A0A0L7REA6   A0A2S2N8V0   A0A0M3QXT6   I7M5V8   A0A182RPE2   J9K7S7   A0A3B0KEG8   A0A0Q9X731   A0A1J1IG23   A0A1J1IG34   F4W6N3   V5H8I1   A0A293MFZ3  

KEGG

101741366    no KO assigned | (RefSeq) protein TAPT1 homolog

GO

GO:0016021   GO:0045724   GO:0036064   GO:0030176   GO:0005783   GO:0035437   GO:0005524   GO:0004672   GO:0006869   GO:0003700   GO:0061817   GO:0008289  

PANTHER

PTHR13317  

Length:

417

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

84.7302400000001

Exp number, first 60 AAs:

20.38639

Total prob of N-in:

0.25355

POSSIBLE N-term signal

sequence

outside

1  -  34

TMhelix

35  -  57

inside

58  -  195

TMhelix

196  -  218

outside

219  -  227

TMhelix

228  -  250

inside

251  -  417

 

 

Pi

138.78731

Theta

140.562654

Tajima's D

0.006115

CLR

180.932085

CSRT

0.366581670916454

Interpretation

Uncertain