Silkworm Genome Informatics Database

Gene

KWMTBOMO13726

Pre Gene Modal

BGIBMGA011510

Annotation

PREDICTED:_uncharacterized_protein_LOC106137277_[Amyelois_transitella]

Location

Bomo_Chr23(+):7687365-7691401 View in EpiBrowser

Transcription factor

TF_bZIP

Location in the cell

Nuclear Reliability : 4.828

CDS

ATGTCGGATTCTATTTACACACATGATTTTCTCTTTGAGCCAGGCGTAGAGATAAAACAGGAACTACCGTATGAACTGGGACCCATGTCTGCTTCTGTGCCTATACCGCAACGCCGCAACGATCTCGGTGACTTCAGCTCTGAAATAGACTTATGCCTTCAGGACAGCTTGGCTGGTTCATTTCACAGTGTTCCTTCCATGCAGTATGGTAAATTTGAAGCAGATAATTCTTCCAAGATCGACACATTTAAAATGGATGATGATGATATTTTTCAAGTTGATAAAGCCGATTTAATATTAGGACCAACTTTGGCTGAACTTAATGCAAATCCAGACACATTATTAGATGACTTGAATATTGATGACTTACTGCTTCCGGAGGAGAGTGGTTACTGTGTACAAATTGGAGGTGTCATGAGCGGATCGCGGCGTGGACCTGGCATGCAGACTAACAATGCCATGCCAACTGATAGTCCCTGCAGTCCTTATGGTCAAGTTCAACAGGCTTTTTCACCAGCAAGTCAGCACAGCAGTGCATCATCAAGTTTTGCACAACCTATGAACCAGTTACCAGAGATGTTACTTCGTATGGATGGCTACAGTGGTGAAATAGTTTTAGGGCAGTCGGTACCAGCATCTACAGTACTGCCTCCATACCCTACAAATATTAAGCCTCAACAGACACAGCTTTCTTCATCTGCACCAACACATTTGACTATGGAACAGATATGGCAGAGAAGGGAGCCACGTAAACATCTACTATCTACCAGCTCATTGGCTGAGGCAGGGTCTGCTTCATCATTGTCTGGTGGTCTATTAAGTCCTGGGGCAGGAGAGTATTCACAAGATGAAGATGATAGAGACATTGAATCTGATGAGGATAGTGATAGATACGAAGATCTCTCCTCAGATGAATCCAATGATGAGTCTGAAACTAAACAAGCACGGCATAATGCTAAGAAAGAAAAGTATTTTTGGCAATACAATGTTCAAGCAAAAGGTCCTAAAGGTCAAAGACTGGTTTTGAATAAAAAGTCAGAGGATCCACATATATTGAACTCTGTAACTGATCCTGTATTCAGTCCTAGCTGCAGTGTAAGAGGAATCAAACACAGTGGTAAAGCAAGGAAAGGCGATGGTAATGACCTAACTCCTAATCCTCGAAAGCTGTATGTAATCGGAAAAGAGCTAGATAATTTGGGCAAAGTCATAAACGATATGATACCTGTCAGTGAGTTGCCTTTCAATGTTAGACCAAAGACACGAAAAGAGAAGAACAAGCTGGCTTCTAGAGCCTGCAGATTAAAGAAAAAAGCCCAGCATGAAGCAAATAAAATTAAACTACACGGGTTGGAAAATGAGCACAAGCGACTTCTGAATGGAATACAGCAGATGAAACATGTAATACACAGCAGAGTTAATATGCAGAGTGATGTTGACTGGAATACACATGTTAAAGGAATAATAAACACAGCCACTGAAGTGAAAATTGCTGGTAAGACTTCAGAATTTGTGAACAGAATTTTAGACAATGTCAGGGCTGGACAGACAAATGGCGGTCTAAATGATATTTAA

Protein

MSDSIYTHDFLFEPGVEIKQELPYELGPMSASVPIPQRRNDLGDFSSEIDLCLQDSLAGSFHSVPSMQYGKFEADNSSKIDTFKMDDDDIFQVDKADLILGPTLAELNANPDTLLDDLNIDDLLLPEESGYCVQIGGVMSGSRRGPGMQTNNAMPTDSPCSPYGQVQQAFSPASQHSSASSSFAQPMNQLPEMLLRMDGYSGEIVLGQSVPASTVLPPYPTNIKPQQTQLSSSAPTHLTMEQIWQRREPRKHLLSTSSLAEAGSASSLSGGLLSPGAGEYSQDEDDRDIESDEDSDRYEDLSSDESNDESETKQARHNAKKEKYFWQYNVQAKGPKGQRLVLNKKSEDPHILNSVTDPVFSPSCSVRGIKHSGKARKGDGNDLTPNPRKLYVIGKELDNLGKVINDMIPVSELPFNVRPKTRKEKNKLASRACRLKKKAQHEANKIKLHGLENEHKRLLNGIQQMKHVIHSRVNMQSDVDWNTHVKGIINTATEVKIAGKTSEFVNRILDNVRAGQTNGGLNDI

Similarity

Belongs to the cullin family.

Uniprot

H9JPQ5 A0A2A4J8J2 A0A3S2NUF1 A0A2H1VJ76 A0A1E1WEL7 A0A194RQM9 + More
A0A194PKS9 A0A212FJP3 A0A0L7L6N5 A0A1W4XIG3 D6WBE6

Pubmed

19121390 26354079 22118469 26227816 18362917 19820115 + More

EMBL

BABH01015150 BABH01015151 NWSH01002449 PCG68281.1 RSAL01000184 RVE44838.1 + More
ODYU01002594 SOQ40304.1 GDQN01005658 JAT85396.1 KQ459833 KPJ19792.1 KQ459601 KPI94041.1 AGBW02008253 OWR53929.1 JTDY01002630 KOB71060.1 KQ971312 EEZ97893.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053240 UP000053268 UP000007151 + More
UP000037510 UP000192223 UP000007266

PRIDE

H9JPQ5

Pfam

PF07716   bZIP_2        + More
PF10557   Cullin_Nedd8
PF00888   Cullin

Interpro

IPR039165   CREBRF        + More
IPR004827   bZIP
IPR016159   Cullin_repeat-like_dom_sf
IPR016158   Cullin_homology
IPR036317   Cullin_homology_sf
IPR036388   WH-like_DNA-bd_sf
IPR001373   Cullin_N
IPR036390   WH_DNA-bd_sf
IPR016157   Cullin_CS
IPR019559   Cullin_neddylation_domain

SUPFAM

SSF75632   SSF75632        + More
SSF74788   SSF74788
SSF46785   SSF46785

Gene 3D

1.10.10.10

ProteinModelPortal

H9JPQ5 A0A2A4J8J2 A0A3S2NUF1 A0A2H1VJ76 A0A1E1WEL7 A0A194RQM9 + More
A0A194PKS9 A0A212FJP3 A0A0L7L6N5 A0A1W4XIG3 D6WBE6

KEGG

101740805 K21554 CREB3 regulatory factor | (RefSeq) uncharacterized LOC101740805

GO

GO:0006986 GO:0003700 GO:0031461 GO:0006511 GO:0031625 GO:0006355 GO:0043565 GO:0005515 GO:0000287 GO:0016620 GO:0016787 GO:0003676 GO:0016491 GO:0015930

PANTHER

PTHR21552

Length:

524

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000440000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00158

outside

1 - 524

Pi

219.56702

Theta

180.189946

Tajima's D

0.586384

CLR

0.000002

CSRT

0.541722913854307

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics