Gene

KWMTBOMO13724  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011509

Annotation

putative_7?8-dihydro-8-oxoguanine-triphosphatase_isoform_1_[Danaus_plexippus]

Location

Bomo_Chr23(+):7673945-7675079      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.696

CDS

ATGTCGCGCGAAGTAAATAACAGTCTTAATCTATTGATTGAAGGTTTGGGTTTAGATTCAGAGGGGAAAGATTTCTGTGACTTTACAATAGCAGATCAAAACTCAGTAGCAGAATCTCAAGGAATTACGCCTACTACTCCATCTAATTTCAAACCGGTACTTGGCGGCAACGTCACCTACGTCGTTGCTTGTGTTATTATAAACGAGTTCAATGAAGTACTTATGATGCAAGAAGCAAAAGAAAGCTGTGCTGGGAAATGGTATTTACCTGCTGGCAGAATGGAAAAAGGAGAAACAATTGTACAGGCTGCCGTAAGAGAAGTGTTAGAGGAAACTGGTCTTCAGTGTGACCTCAAAACTTTACTTGTTGTAGAAACCGCTGGGGGTTCCTGGTACAGGTTTGTACTTACAGGAGAAATTATTGGAGGTGAATTGAAAACACCAGCAAGAGCTGACAAAGAATCATTACAAGCTAAATGGATATCTAGTTTAGAAGAAATCACATTAAGAGCTAATGATATCATACACCTAATTGAAAAGGCTAAGCTTTATAAACAAACAAAGCCTAACAATTGGCATAAAGAAATTTTGCCTGCCTCCACACCTCATACAAAAGATTTGCTCAGGTTAATAGTTGTGATAAAAAAGAGAAGTACAAACAGATTACATGTACTACTTAGTGAAAAAACATCAATACATTTCCCAACTTCTGAAATAAATCCTAATAAAAGTCTACACTCCACTTTACGAAGATTTATGGTTGAAATGTTTGGAGCAGATGTGAGTCAACATCGACCACTTGGTTTGCTTAACGTAGAGGCAGATCCAAGTGCTGATGGGTGTTGTCTCACACTCCTAGTTGCATTTAGATCTCCTCTTGAGGAAGTCCCTCTTATCGGTAAATGTGCTTGGCAAGAAGTATCCCAAGAATTGGAGAAAAAGCTACTTATAATGATAACAAACAAAAATTCCACTATTGAGTTACATGTTGTCCGTTAA

Protein

MSREVNNSLNLLIEGLGLDSEGKDFCDFTIADQNSVAESQGITPTTPSNFKPVLGGNVTYVVACVIINEFNEVLMMQEAKESCAGKWYLPAGRMEKGETIVQAAVREVLEETGLQCDLKTLLVVETAGGSWYRFVLTGEIIGGELKTPARADKESLQAKWISSLEEITLRANDIIHLIEKAKLYKQTKPNNWHKEILPASTPHTKDLLRLIVVIKKRSTNRLHVLLSEKTSIHFPTSEINPNKSLHSTLRRFMVEMFGADVSQHRPLGLLNVEADPSADGCCLTLLVAFRSPLEEVPLIGKCAWQEVSQELEKKLLIMITNKNSTIELHVVR

Similarity

Belongs to the Nudix hydrolase family.
Belongs to the cullin family.

Uniprot

H9JPQ4   A0A212FJM4   A0A2H1VIR8   A0A194RQW9   A0A2A4J9S0   A0A0N1IEH5   + More
A0A0L7L6C0   A0A336M715   A0A1W4WWP6   A0A0T6B3J0   D6X526   A0A182PA72   A0A1Y9IRC3   A0A1C7CZW3   A0A1I8JT43   Q7QC17   A0A182U3J6   A0A182SBA5   A0A182YKG8   A0A182QNN8   A0A2M4AIR7   A0A2M4BTP0   W5J680   A0A182FKX0   A0A2M3ZCM4   A0A084VSD0   Q172L0   A0A182H146   A0A182GBC6   A0A182IPC1   A0A0L0BP34   A0A1I8Q582   A0A1I8MNR8   A0A1Q3FLM9   B0WKS7   W8BJK4   A0A0A1WN79   A0A034WT87   A0A1Y1NB95   A0A0K8VDR4   A0A1W4W1G9   B3P4J5   B4HI15   A0A182XI81   B4QU27   Q9VGM4   A0A182NA68   A0A182VX69   B4NAW3   B4PU53   T1H691   A0A182MB48   B3M0Y0   A0A1A9X988   A0A182K693   A0A1B0GDT0   A0A1B0BF44   A0A1A9ZY51   A0A1A9V652   A0A1J1ID37   Q294Z7   B4KDZ7   A0A1B0DHG3   B4JUP7   A0A3B0KIR1   A0A182R3M1   B4GME4   A0A1L8DM12   A0A0Q9W1W0   A0A1B0GJX8   A0A0M5J1H6   B4M5D5   A0A2J7RD96   A0A1B6JZ00   A0A0P4VUA7   T1HFP4   A0A023F3J9   A0A1B6GQA1   A0A1B6CVH3   E0VTD6   A0A1B6K9J9   A0A069DRT9   A0A0V0G9U9   J9JZ22   A0A232FJN4   E9HC72   A0A2H8TXL6   A0A2S2PF47   A0A0P5WH22   A0A067RRT5   A0A0P5SCF4   A0A1D2MTM2   A0A226E0N5   A0A1A9X466   A0A0P5UWA3   A0A0P5C797   A0A2P2I2G7   A0A0A9W8E7   A0A0P5UWN1   G3MMC9  

Pubmed

19121390    22118469    26354079    26227816    18362917    19820115    + More
20966253    12364791    14747013    17210077    25244985    20920257    23761445    24438588    17510324    26483478    26108605    25315136    24495485    25830018    25348373    28004739    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    18057021    27129103    25474469    20566863    26334808    28648823    21292972    24845553    27289101    25401762    22216098   

EMBL

BABH01015150    AGBW02008253    OWR53932.1    ODYU01002594    SOQ40302.1    KQ459833    + More
KPJ19794.1    NWSH01002449    PCG68284.1    KQ459601    KQ458531    KPI94039.1    KPJ05840.1    JTDY01002630    KOB71058.1    UFQS01000617    UFQT01000617    SSX05450.1    SSX25810.1    LJIG01016068    KRT81710.1    KQ971382    EEZ97187.1    APCN01000420    AAAB01008859    EAA08112.3    AXCN02000217    GGFK01007350    MBW40671.1    GGFJ01007170    MBW56311.1    ADMH02002026    ETN59927.1    GGFM01005467    MBW26218.1    ATLV01015920    KE525044    KFB40874.1    CH477435    EAT40954.1    JXUM01102439    KQ564727    KXJ71825.1    JXUM01052697    JXUM01052698    JXUM01052699    JRES01001582    KNC21738.1    GFDL01006564    JAV28481.1    DS231976    EDS30050.1    GAMC01009358    GAMC01009357    GAMC01009356    GAMC01009355    JAB97198.1    GBXI01014444    GBXI01011946    GBXI01009253    JAC99847.1    JAD02346.1    JAD05039.1    GAKP01001954    JAC56998.1    GEZM01007426    GEZM01007425    JAV95212.1    GDHF01015235    GDHF01003092    JAI37079.1    JAI49222.1    CH954181    EDV49510.1    CH480815    EDW42597.1    CM000364    EDX13358.1    AE014297    AY070551    AAF54653.1    AAL48022.1    CH964232    EDW80927.1    CM000160    EDW97703.1    KRK03922.1    KRK03923.1    AXCM01000752    CH902617    EDV43209.1    CCAG010012023    JXJN01013279    CVRI01000047    CRK98123.1    CM000070    EAL28815.1    CH933806    EDW16018.1    AJVK01061072    CH916374    EDV91217.1    OUUW01000014    SPP88410.1    CH479185    EDW38018.1    GFDF01006677    JAV07407.1    CH940652    KRF79106.1    KRF79107.1    AJWK01022434    CP012526    ALC45811.1    EDW59846.2    NEVH01005293    PNF38805.1    GECU01003265    JAT04442.1    GDKW01000976    JAI55619.1    ACPB03006524    GBBI01002786    JAC15926.1    GECZ01005190    JAS64579.1    GEDC01020075    GEDC01004974    JAS17223.1    JAS32324.1    DS235762    EEB16642.1    GEBQ01031882    JAT08095.1    GBGD01002101    JAC86788.1    GECL01001297    JAP04827.1    ABLF02030582    NNAY01000124    OXU30750.1    GL732619    EFX70574.1    GFXV01007230    MBW19035.1    GGMR01015395    MBY28014.1    GDIQ01141147    GDIP01086513    LRGB01000115    JAL10579.1    JAM17202.1    KZS20721.1    KK852463    KDR23390.1    GDIQ01097809    JAL53917.1    LJIJ01000571    ODM96144.1    LNIX01000009    OXA50527.1    GDIP01107952    JAL95762.1    GDIP01179347    JAJ44055.1    IACF01002576    LAB68224.1    GBHO01040826    GBRD01017674    JAG02778.1    JAG48153.1    GDIP01124251    JAL79463.1    JO843030    AEO34647.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000218220    UP000053268    UP000037510    + More
UP000192223    UP000007266    UP000075885    UP000075903    UP000075882    UP000075840    UP000007062    UP000075902    UP000075901    UP000076408    UP000075886    UP000000673    UP000069272    UP000030765    UP000008820    UP000069940    UP000249989    UP000075880    UP000037069    UP000095300    UP000095301    UP000002320    UP000192221    UP000008711    UP000001292    UP000076407    UP000000304    UP000000803    UP000075884    UP000075920    UP000007798    UP000002282    UP000015102    UP000075883    UP000007801    UP000092443    UP000075881    UP000092444    UP000092460    UP000092445    UP000078200    UP000183832    UP000001819    UP000009192    UP000092462    UP000001070    UP000268350    UP000075900    UP000008744    UP000008792    UP000092461    UP000092553    UP000235965    UP000015103    UP000009046    UP000007819    UP000215335    UP000000305    UP000076858    UP000027135    UP000094527    UP000198287    UP000091820   

PRIDE

H9JPQ4    Q9VGM4   

Pfam

PF00293   NUDIX        + More
PF10557   Cullin_Nedd8
PF00888   Cullin
PF07258   COMM_domain
PF03690   UPF0160

Interpro

IPR020084   NUDIX_hydrolase_CS        + More
IPR020476   Nudix_hydrolase       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR000086   NUDIX_hydrolase_dom       
IPR016157   Cullin_CS       
IPR019559   Cullin_neddylation_domain       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR001373   Cullin_N       
IPR036317   Cullin_homology_sf       
IPR016159   Cullin_repeat-like_dom_sf       
IPR016158   Cullin_homology       
IPR003226   Met-dep_prot_hydro       
IPR037354   Commd2       
IPR017920   COMM       

SUPFAM

SSF55811   SSF55811        + More
SSF75632   SSF75632       
SSF74788   SSF74788       
SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd04750  Commd2

ProteinModelPortal

H9JPQ4   A0A212FJM4   A0A2H1VIR8   A0A194RQW9   A0A2A4J9S0   A0A0N1IEH5   + More
A0A0L7L6C0   A0A336M715   A0A1W4WWP6   A0A0T6B3J0   D6X526   A0A182PA72   A0A1Y9IRC3   A0A1C7CZW3   A0A1I8JT43   Q7QC17   A0A182U3J6   A0A182SBA5   A0A182YKG8   A0A182QNN8   A0A2M4AIR7   A0A2M4BTP0   W5J680   A0A182FKX0   A0A2M3ZCM4   A0A084VSD0   Q172L0   A0A182H146   A0A182GBC6   A0A182IPC1   A0A0L0BP34   A0A1I8Q582   A0A1I8MNR8   A0A1Q3FLM9   B0WKS7   W8BJK4   A0A0A1WN79   A0A034WT87   A0A1Y1NB95   A0A0K8VDR4   A0A1W4W1G9   B3P4J5   B4HI15   A0A182XI81   B4QU27   Q9VGM4   A0A182NA68   A0A182VX69   B4NAW3   B4PU53   T1H691   A0A182MB48   B3M0Y0   A0A1A9X988   A0A182K693   A0A1B0GDT0   A0A1B0BF44   A0A1A9ZY51   A0A1A9V652   A0A1J1ID37   Q294Z7   B4KDZ7   A0A1B0DHG3   B4JUP7   A0A3B0KIR1   A0A182R3M1   B4GME4   A0A1L8DM12   A0A0Q9W1W0   A0A1B0GJX8   A0A0M5J1H6   B4M5D5   A0A2J7RD96   A0A1B6JZ00   A0A0P4VUA7   T1HFP4   A0A023F3J9   A0A1B6GQA1   A0A1B6CVH3   E0VTD6   A0A1B6K9J9   A0A069DRT9   A0A0V0G9U9   J9JZ22   A0A232FJN4   E9HC72   A0A2H8TXL6   A0A2S2PF47   A0A0P5WH22   A0A067RRT5   A0A0P5SCF4   A0A1D2MTM2   A0A226E0N5   A0A1A9X466   A0A0P5UWA3   A0A0P5C797   A0A2P2I2G7   A0A0A9W8E7   A0A0P5UWN1   G3MMC9  

PDB

3GG6     E-value=6.45544e-33,     Score=351

KEGG

101740661    K17817 8-oxo-dGDP phosphatase [EC:3.6.1.58] | (RefSeq) 8-oxo-dGDP phosphatase NUDT18

GO

GO:0016787   GO:0006511   GO:0031461   GO:0031625   GO:0046933   GO:0051082   GO:0005515   GO:0000287   GO:0016620   GO:0003676   GO:0016491   GO:0015930  

Length:

332

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.3655

Exp number, first 60 AAs:

0.15439

Total prob of N-in:

0.04600

outside

1  -  332

 

 

Pi

267.682762

Theta

192.560908

Tajima's D

1.069922

CLR

0

CSRT

0.686065696715164

Interpretation

Uncertain