Gene

KWMTBOMO13719

Annotation

PREDICTED:_uncharacterized_protein_LOC106134874_[Amyelois_transitella]

Location

Bomo_Chr23(+):7618355-7622873      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.991

CDS

ATGAAATCACAAAACGACCAGGATTCTTCTTTACTTGAATGCTATCAACGATTGATTACGAATGCACAAGCCGTAGCTGACTTCCCTCAAAAATGTCCACCTGCTGCGGATGGTATGGAAAGGTTTGCCTGTCCTACACCGGACCGGCAAGGACGTTACCGATGTATCGACGATCACGTGCTTTGCGACGGATTCATTGACTGTCCTAGTGGTGAGGATGAAGATCGACAAGCCTGCATGTTCTATAAAACGACTAAGGCCCACCTTGACGTATTGGCTGACGCGCTACTTCGATGGGCACGTGGACGCTAA

Protein

MKSQNDQDSSLLECYQRLITNAQAVADFPQKCPPAADGMERFACPTPDRQGRYRCIDDHVLCDGFIDCPSGEDEDRQACMFYKTTKAHLDVLADALLRWARGR

Uniprot

A0A3S2NDR7   A0A194RQV9   A0A182W1V5   A0A212FJK3   A0A0E3W2A2   A0A182NSZ5   + More
A0A1J1J8P3   A0A139WN15   A0A182FUN1   A0A182P6Z4   A0A336KAK1   A0A1A9UVL1   A0A2P8YUT5   A0A1B0BUD9   A0A3Q0JEC7   A0A1B6I1H3   A0A1B0AG67   A0A0K8VT90   A0A1B6FKQ0   A0A0C9RUL4   A0A1W4WQF9   A0A1B6C999   A0A1B6JUZ1   A0A0L0BYV3   A0A2R7WGB3   A0A1B6L764   A0A1I8P322   A0A3B0JPH8   B3MH32   B4GGP8   B4KPV4   A0A1W4U9W9   A0A232EHZ0   B3NS86   Q95NU8   B4P5P6   B4MR17   A0A0J9RAP6   A0A0M4EWK8   B4J5G1   F4WCP3   A0A2A3ESW0   V9IFC3   A0A1D2MPE6   W8BHH9   A0A3L8D7R7   A0A088AS92   A0A0A9X7P3   A0A0P5YKM3   A0A0P5LPY6   A0A0P6BNY6   J9KKG2   A0A2S2PPD9   A0A2S2Q9Y3   A0A0K2TEL9   A0A0N8EL00   T1IY51  

Pubmed

26354079    22118469    18362917    19820115    29403074    26108605    + More
17994087    28648823    10731132    11701128    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    21719571    27289101    24495485    30249741    25401762   

EMBL

RSAL01000184    RVE44851.1    KQ459833    KPJ19784.1    AGBW02008253    OWR53923.1    + More
HACL01000166    CFW94460.1    CVRI01000074    CRL08164.1    KQ971312    KYB29273.1    UFQS01000226    UFQT01000226    SSX01679.1    SSX22059.1    PYGN01000347    PSN48022.1    JXJN01020627    GECU01026991    JAS80715.1    GDHF01010241    JAI42073.1    GECZ01019010    JAS50759.1    GBYB01011286    JAG81053.1    GEDC01027246    JAS10052.1    GECU01004686    JAT03021.1    JRES01001139    KNC25227.1    KK854714    PTY18120.1    GEBQ01025078    GEBQ01020482    JAT14899.1    JAT19495.1    OUUW01000001    SPP75246.1    CH902619    EDV35791.1    CH479183    EDW35668.1    CH933808    EDW10231.1    NNAY01004408    OXU17942.1    CH954179    EDV56388.1    AE013599    AY060310    AF425733    AF425734    AAF58582.2    AAL25349.1    AAL30510.1    AGB93443.1    CM000158    EDW90843.1    CH963849    EDW74556.1    CM002911    KMY93091.1    CP012524    ALC42207.1    CH916367    EDW00724.1    GL888070    EGI68223.1    KZ288186    PBC34818.1    JR043401    AEY59770.1    LJIJ01000754    ODM94772.1    GAMC01017436    JAB89119.1    QOIP01000011    RLU16527.1    GBHO01027973    JAG15631.1    GDIP01057902    LRGB01001569    JAM45813.1    KZS11792.1    GDIQ01166876    JAK84849.1    GDIP01012282    JAM91433.1    ABLF02039729    GGMR01018674    MBY31293.1    GGMS01005228    MBY74431.1    HACA01006671    CDW24032.1    GDIQ01016468    JAN78269.1    JH431669   

Proteomes

UP000283053    UP000053240    UP000075920    UP000007151    UP000075884    UP000183832    + More
UP000007266    UP000069272    UP000075885    UP000078200    UP000245037    UP000092460    UP000079169    UP000092445    UP000192223    UP000037069    UP000095300    UP000268350    UP000007801    UP000008744    UP000009192    UP000192221    UP000215335    UP000008711    UP000000803    UP000002282    UP000007798    UP000092553    UP000001070    UP000007755    UP000242457    UP000094527    UP000279307    UP000005203    UP000076858    UP000007819   

PRIDE

Q95NU8   

Pfam

PF00057   Ldl_recept_a        + More
PF01991   vATP-synt_E

Interpro

IPR023415   LDLR_class-A_CS        + More
IPR002172   LDrepeatLR_classA_rpt       
IPR036055   LDL_receptor-like_sf       
IPR038495   ATPase_E_C       
IPR002842   ATPase_V1_Esu       

SUPFAM

SSF57424   SSF57424       

Gene 3D

4.10.400.10     3.30.2320.30    

CDD

cd00112  LDLa

ProteinModelPortal

A0A3S2NDR7   A0A194RQV9   A0A182W1V5   A0A212FJK3   A0A0E3W2A2   A0A182NSZ5   + More
A0A1J1J8P3   A0A139WN15   A0A182FUN1   A0A182P6Z4   A0A336KAK1   A0A1A9UVL1   A0A2P8YUT5   A0A1B0BUD9   A0A3Q0JEC7   A0A1B6I1H3   A0A1B0AG67   A0A0K8VT90   A0A1B6FKQ0   A0A0C9RUL4   A0A1W4WQF9   A0A1B6C999   A0A1B6JUZ1   A0A0L0BYV3   A0A2R7WGB3   A0A1B6L764   A0A1I8P322   A0A3B0JPH8   B3MH32   B4GGP8   B4KPV4   A0A1W4U9W9   A0A232EHZ0   B3NS86   Q95NU8   B4P5P6   B4MR17   A0A0J9RAP6   A0A0M4EWK8   B4J5G1   F4WCP3   A0A2A3ESW0   V9IFC3   A0A1D2MPE6   W8BHH9   A0A3L8D7R7   A0A088AS92   A0A0A9X7P3   A0A0P5YKM3   A0A0P5LPY6   A0A0P6BNY6   J9KKG2   A0A2S2PPD9   A0A2S2Q9Y3   A0A0K2TEL9   A0A0N8EL00   T1IY51  

PDB

4U8U     E-value=0.0456106,     Score=79

KEGG

105842491    no KO assigned | (RefSeq) uncharacterized LOC105842491

GO

GO:0043195   GO:0030297   GO:0043410   GO:0016021   GO:0033178   GO:0046961   GO:0015991   GO:0051124   GO:0007435   GO:0061177   GO:0042694   GO:0007522   GO:0061176   GO:0042051   GO:1900074   GO:0005615   GO:0008021   GO:0007411   GO:0007509   GO:0005576   GO:0008233   GO:0005515   GO:0006915   GO:0007186   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00037

Exp number, first 60 AAs:

0

Total prob of N-in:

0.59235

inside

1  -  103

 

 

Pi

173.507905

Theta

24.397838

Tajima's D

1.1962

CLR

0.059635

CSRT

0.715814209289536

Interpretation

Uncertain