Gene

KWMTBOMO13715

Pre Gene Modal

BGIBMGA011008

Annotation

cell_death_activator_CIDE-B_[Bombyx_mori]

Location

Bomo_Chr23(-):7451608-7457024      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.692

CDS

ATGGAAAACGACATTAACAAACCATATAAAATTTGCGATGTTAATCGCGAAAAGAAGAAAGGAATTGTCGCGATGTCGCTTGAAGACTTACTCATAAAAGTGCCGGAAAAGCTGGGAATGCCTTCTGAAAATTTAACTGTTGTATTGGAATCAGATGGTACAGAAGTTGATGATGAAGAATACTTCTCTACGTTAGACCCAGACACGTCCCTCATGATTTTGCACGGAAATGAAAAGTGGGTCCCGAACATGCCTAAGTGTCAGGTATCGTTAGATCAGACCGATGATATAGCTTTGGGTGATAAAGAACAAGTGGCGAGTCTTGTTGGTCGACTGCAGCATAACCTATGTCACATCTCGTTGCTTGGAGGCCAAGACCTAGAATTGTTATCTGATATGGATCCTGACAGCTTGGCTGACATTGTTACTGATCGAGATAATAGAATAATTTTGGAACATATTAAAGAAGCATCTGGAAGAATTCTTCTGGAAAAACGTCAAGCCCAAGATGCTATGGAATTGCTAAAATTATACCATCAGAGTGTCTCCAATGGTCCAGAAGACGTGTCTTCCCCAAAGCAGGAGAGGGTTTAA

Protein

MENDINKPYKICDVNREKKKGIVAMSLEDLLIKVPEKLGMPSENLTVVLESDGTEVDDEEYFSTLDPDTSLMILHGNEKWVPNMPKCQVSLDQTDDIALGDKEQVASLVGRLQHNLCHISLLGGQDLELLSDMDPDSLADIVTDRDNRIILEHIKEASGRILLEKRQAQDAMELLKLYHQSVSNGPEDVSSPKQERV

Uniprot

B0FC96   A0A2H1W0V8   D3JSV7   A0A1E1W5N0   A0A2A4JGA6   A0A194PN41   + More
S4P8N0   A0A3S2N966   A0A194QMM7   A0A212FJN3   H9JNA5   A0A0L7KP39   A0A1Y1M327   A0A1W4WQE4   J3JZH4   D6WA34   A0A2J7RD86   N6TRH6   A0A067RRT3   A0A2P8Y1C4   A0A2R7W5T4   A0A151IBY9   A0A0J7L3N9   A0A2S2N9B7   A0A0L7QL78   E2A1G4   F4WHK7   A0A151I114   A0A151K1N2   A0A158N900   A0A151J514   A0A2H8TSM0   A0A026VSY1   A0A151WNQ8   E9JAU5   J9JNI3   E2C6N4   A0A2A3ER65   V9IHW8   A0A088AUR4   A0A1J1HMP5   A0A1B6MIX1   A0A1B6GC46   R4G377   A0A1B6DP76   A0A0A9XJA2   A0A1S3CVE3   A0A1Q3EVC5   A0A154PMN3   E0VWD7   A0A182QWK9   A0A182HFQ6   A0A1J1HME3   A0A1I8N5U7   A0A1S4G3C0   B0WG49   A0A0L0C8P1   A0A1J1HRV6   W5J8V0   A0A182P8G5   A0A1I8PYT9   A0A1B0G737   Q16FC1   A0A182MYE3   A0A182JPX1   A0A182J411   A0A182RLP3   A0A182SCB7   A0A182U9F5   A0A182X1U1   A0A182LQ35   A0A0M8ZRN7   A0A182WCU8   A0A182VLQ8   B4KPU8   B4LKV3   A0A182YA41   A0A0A1WNW0   A0A084WI53   A0A034WGY6   A0A023VTR5   A0A0K8U151   A0A1A9XIC9   W8ATX3   A0A224XZA8   B4J5G5   A0A1B0AG69   B4QC70   A0A336MMA2   K1RJK1   A0A1A9WQX9   A0A1S3DKZ7   B3NS92   Q6NR36   B4HNX1   A0A1W4U9Y1   B4P5Q2   A0A1B0BUD3   A0A0B4KFQ3  

Pubmed

26354079    23622113    22118469    19121390    26227816    28004739    + More
22516182    23537049    18362917    19820115    24845553    29403074    20798317    21719571    21347285    24508170    30249741    21282665    25401762    26823975    20566863    25315136    17510324    26108605    20920257    23761445    20966253    17994087    25244985    25830018    24438588    25348373    24642253    24495485    22936249    22992520    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

EU305741    ABY50540.1    ODYU01005373    SOQ46144.1    GU288814    ADB78701.1    + More
GDQN01008767    JAT82287.1    NWSH01001670    PCG70460.1    KQ459600    KPI94154.1    GAIX01009405    JAA83155.1    RSAL01000184    RVE44847.1    KQ461195    KPJ06777.1    AGBW02008253    OWR53919.1    BABH01019629    JTDY01008133    KOB64719.1    GEZM01042406    JAV79881.1    BT128656    KB632391    AEE63613.1    ERL94534.1    KQ971312    EEZ98068.1    NEVH01005293    PNF38799.1    APGK01022561    KB740432    ENN80663.1    KK852463    KDR23385.1    PYGN01001052    PSN38058.1    KK854364    PTY15096.1    KQ978095    KYM97028.1    LBMM01000785    KMQ97497.1    GGMR01000913    MBY13532.1    KQ414934    KOC59286.1    GL435766    EFN72637.1    GL888161    EGI66361.1    KQ976581    KYM79878.1    KQ981229    KYN44346.1    ADTU01009011    KQ980063    KYN17959.1    GFXV01005382    MBW17187.1    KK108326    QOIP01000004    EZA46760.1    RLU23366.1    KQ982907    KYQ49448.1    GL770679    EFZ10044.1    ABLF02039438    GL453160    EFN76436.1    KZ288192    PBC34197.1    JR048336    AEY60635.1    CVRI01000011    CRK89211.1    GEBQ01004067    JAT35910.1    GECZ01009765    JAS60004.1    ACPB03001264    GAHY01001926    JAA75584.1    GEDC01027842    GEDC01020905    GEDC01009813    JAS09456.1    JAS16393.1    JAS27485.1    GBHO01022798    GBHO01022797    GDHC01012985    JAG20806.1    JAG20807.1    JAQ05644.1    GFDL01015781    JAV19264.1    KQ434954    KZC12558.1    DS235819    EEB17688.1    AXCN02001048    APCN01005563    APCN01005564    APCN01005565    CRK89213.1    DS231923    EDS26745.1    JRES01000848    KNC27764.1    CRK89214.1    ADMH02002040    ETN59808.1    CCAG010003771    CCAG010003772    CH478464    EAT32934.1    KQ435883    KOX69725.1    CH933808    EDW10225.1    CH940648    EDW60757.2    GBXI01013563    JAD00729.1    ATLV01023913    KE525347    KFB49897.1    GAKP01005370    JAC53582.1    KF745191    AHY19024.1    GDHF01032249    GDHF01006099    JAI20065.1    JAI46215.1    GAMC01016898    JAB89657.1    GFTR01002494    JAW13932.1    CH916367    EDW00728.1    CM000362    CM002911    EDX06701.1    KMY93082.1    UFQT01001192    SSX29417.1    JH816168    EKC41810.1    CH954179    EDV56394.2    AE013599    BT010245    AAF58589.1    AAQ23563.1    CH480816    EDW47486.1    CM000158    EDW90849.2    JXJN01020618    AGB93442.1   

Proteomes

UP000218220    UP000053268    UP000283053    UP000053240    UP000007151    UP000005204    + More
UP000037510    UP000192223    UP000030742    UP000007266    UP000235965    UP000019118    UP000027135    UP000245037    UP000078542    UP000036403    UP000053825    UP000000311    UP000007755    UP000078540    UP000078541    UP000005205    UP000078492    UP000053097    UP000279307    UP000075809    UP000007819    UP000008237    UP000242457    UP000005203    UP000183832    UP000015103    UP000079169    UP000076502    UP000009046    UP000075886    UP000075840    UP000095301    UP000002320    UP000037069    UP000000673    UP000075885    UP000095300    UP000092444    UP000008820    UP000075884    UP000075881    UP000075880    UP000075900    UP000075901    UP000075902    UP000076407    UP000075882    UP000053105    UP000075920    UP000075903    UP000009192    UP000008792    UP000076408    UP000030765    UP000092443    UP000001070    UP000092445    UP000000304    UP000005408    UP000091820    UP000008711    UP000000803    UP000001292    UP000192221    UP000002282    UP000092460   

PRIDE

B0FC96    D3JSV7    H9JNA5   

Pfam

PF02017   CIDE-N        + More
PF09033   DFF-C
PF00005   ABC_tran
PF01344   Kelch_1
PF00651   BTB
PF07707   BACK

Interpro

IPR003508   CIDE-N_dom        + More
IPR015121   DNA_fragmentation_mid_dom       
IPR020846   MFS_dom       
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR026082   ABCA       
IPR003593   AAA+_ATPase       
IPR027296   DFF-C       
IPR000210   BTB/POZ_dom       
IPR006652   Kelch_1       
IPR011333   SKP1/BTB/POZ_sf       
IPR015915   Kelch-typ_b-propeller       
IPR011705   BACK       
IPR017299   DFF45       

SUPFAM

SSF52540   SSF52540        + More
SSF81783   SSF81783       
SSF54695   SSF54695       
SSF117281   SSF117281       

Gene 3D

2.120.10.80    

CDD

cd06174  MFS

ProteinModelPortal

B0FC96   A0A2H1W0V8   D3JSV7   A0A1E1W5N0   A0A2A4JGA6   A0A194PN41   + More
S4P8N0   A0A3S2N966   A0A194QMM7   A0A212FJN3   H9JNA5   A0A0L7KP39   A0A1Y1M327   A0A1W4WQE4   J3JZH4   D6WA34   A0A2J7RD86   N6TRH6   A0A067RRT3   A0A2P8Y1C4   A0A2R7W5T4   A0A151IBY9   A0A0J7L3N9   A0A2S2N9B7   A0A0L7QL78   E2A1G4   F4WHK7   A0A151I114   A0A151K1N2   A0A158N900   A0A151J514   A0A2H8TSM0   A0A026VSY1   A0A151WNQ8   E9JAU5   J9JNI3   E2C6N4   A0A2A3ER65   V9IHW8   A0A088AUR4   A0A1J1HMP5   A0A1B6MIX1   A0A1B6GC46   R4G377   A0A1B6DP76   A0A0A9XJA2   A0A1S3CVE3   A0A1Q3EVC5   A0A154PMN3   E0VWD7   A0A182QWK9   A0A182HFQ6   A0A1J1HME3   A0A1I8N5U7   A0A1S4G3C0   B0WG49   A0A0L0C8P1   A0A1J1HRV6   W5J8V0   A0A182P8G5   A0A1I8PYT9   A0A1B0G737   Q16FC1   A0A182MYE3   A0A182JPX1   A0A182J411   A0A182RLP3   A0A182SCB7   A0A182U9F5   A0A182X1U1   A0A182LQ35   A0A0M8ZRN7   A0A182WCU8   A0A182VLQ8   B4KPU8   B4LKV3   A0A182YA41   A0A0A1WNW0   A0A084WI53   A0A034WGY6   A0A023VTR5   A0A0K8U151   A0A1A9XIC9   W8ATX3   A0A224XZA8   B4J5G5   A0A1B0AG69   B4QC70   A0A336MMA2   K1RJK1   A0A1A9WQX9   A0A1S3DKZ7   B3NS92   Q6NR36   B4HNX1   A0A1W4U9Y1   B4P5Q2   A0A1B0BUD3   A0A0B4KFQ3  

PDB

4D2K     E-value=2.87716e-12,     Score=170

KEGG

100141435    K02310 DNA fragmentation factor, 45 kD, alpha subunit | (RefSeq) Cide-b, lCAD; cell death activator

GO

GO:0006309   GO:0060703   GO:0006915   GO:0045476   GO:0043066   GO:0005524   GO:0042626   GO:0016021   GO:0042981   GO:0005622   GO:0007186   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR19229  

Length:

197

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.25157

outside

1  -  197

 

 

Pi

293.741321

Theta

225.573463

Tajima's D

0.713408

CLR

11.265281

CSRT

0.574021298935053

Interpretation

Uncertain