Gene

KWMTBOMO13713  Validated by peptides from experiments

Annotation

prefoldin_subunit_3_[Bombyx_mori]

Location

Bomo_Chr23(+):7443035-7447658      View in EpiBrowser

Full name

Prefoldin subunit 3      

Location in the cell

Cytoplasmic   Reliability : 2.428 Nuclear   Reliability : 2.077

CDS

ATGGAAGGAGACGGAGTAGAACCCTCGAACCCTAAGTCGTATTCTGGAATACCAGAAGCTGAATTTGTAGATAATGTAGACGAATTTATGAAATCACCGATCAATGCTGAAGGAGTCGATGTAGTTTTGAAGAGTCTAGATGAAAAGCACCGTAAGTATAAGGTGATGGAATACACGTTGGCTACTAAAAGAAGGCGATTACGGCAACAAATCCCAGACTTAGCGCGGACAATTGAAGTAATTGAAAAATTAAAAGAACAAAAAGAGGAAGTAGAAACACAGTTCCTTCTTAGTGATCAAGTATTCGTGAAGGCTAATGTACCACCAACAAAGTCAGTATGCTTGTGGCTTGGAGCTAATGTAATGTTGGAGTATAGTCTTGAAGATGCTGAAAAATTACTGACTACAAATATGGAAACAGCTCAAGAAAATTTAAATCAAGTAGAACATGATTTGGATTTCTTAAGAGATCAGTGTACCACTACCGAAGTGAATATGGCTAGAGTTTACAACTGGGATGTGAAGAAACGCCAGGCAGCTTCTGGTCGCATTACCACTTGTTAA

Protein

MEGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKRQAASGRITTC

Description

Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.

Subunit

Heterohexamer of two PFD-alpha type and four PFD-beta type subunits.

Similarity

Belongs to the prefoldin subunit alpha family.

Uniprot

Q1HPR2   A0A1E1W6U4   A0A2H1VZL9   A0A212FJJ2   S4PMW8   A0A194PLE7   + More
A0A194QN45   A0A0T6B5M5   A0A0L7KN64   A0A1B6HUG4   A0A1B6EQU3   A0A1W4X796   A0A0C9RP12   A0A1B0CZU0   D6WA44   A0A2J7PBH9   A0A2A3EHF6   A0A088AJ58   A0A1B6KKZ5   F4WP05   A0A182X5L9   A0A182HWD0   A0A154NX73   A0A151WM43   A0A0K8TQ52   A0A195E581   A0A310SE73   A5HMP5   A0A195B969   A0A195EUZ8   A0A158NPH9   A0A1S4H5Y6   A0A182KL61   Q7QHF3   A0A0A9WJH4   A0A182UTM6   A0A195CP28   A0A3S2P922   A0A023EHL6   A0A0J7KXA6   T1PGU4   A0A2R7W2Q5   A0A1L8DTZ4   E2ARQ8   J3JZB6   Q17CV4   A0A1Q3F6P6   A0A182RTD7   A0A182NZL6   A0A232FLI8   K7J5F1   A0A182LRI1   A0A034VU72   A0A0A1WTJ0   A0A182JS11   A0A0K8VSE9   A0A161MH09   A0A1Q3F7S9   A0A2M4C0H7   E2BY71   A0A2M4AJ09   W8B403   A0A182QLB8   A0A2M3ZH56   A0A084VHU7   A0A182YB30   A0A182IY41   A0A182N2C3   A0A0L7R7W2   A0A1A9V4P5   A0A1A9XHK7   A0A1B0B480   A0A1A9ZLY0   D3TPL3   A0A1I8PPW1   B0X1A3   T1DJU6   A0A182WDI1   A0A0L0CL29   A0A026W120   T1HC31   T1DNT8   A0A182FKK1   A0A1L8EI82   W5J4H1   A0A1A9WT45   A0A336LIZ2   A0A182T7T2   A0A1Y1NEA9   B3LXC9   B4LXL8   A0A0M4EQ46   U5EVQ5   B3NZF6   E9IST8   Q293S9   B4GLN9   B4NAX9   A0A164X734   V4B4G6  

Pubmed

22118469    23622113    26354079    26227816    18362917    19820115    + More
21719571    26369729    21347285    12364791    20966253    25401762    26823975    24945155    25315136    20798317    22516182    23537049    17510324    28648823    20075255    25348373    25830018    24495485    24438588    25244985    20353571    24330624    26108605    24508170    30249741    20920257    23761445    28004739    17994087    21282665    15632085    23254933   

EMBL

DQ443340    ABF51429.1    GDQN01009740    GDQN01008379    JAT81314.1    JAT82675.1    + More
ODYU01005373    SOQ46146.1    AGBW02008253    OWR53917.1    GAIX01003325    JAA89235.1    KQ459600    KPI94152.1    KQ461195    KPJ06779.1    LJIG01009645    KRT82665.1    JTDY01008133    KOB64718.1    GECU01029389    JAS78317.1    GECZ01029482    GECZ01023070    JAS40287.1    JAS46699.1    GBYB01010175    JAG79942.1    AJVK01009723    KQ971312    EEZ98584.1    NEVH01027088    PNF13693.1    KZ288244    PBC31223.1    GEBQ01027858    GEBQ01020031    JAT12119.1    JAT19946.1    GL888243    EGI63936.1    APCN01001485    KQ434777    KZC04162.1    KQ982944    KYQ48888.1    GDAI01001330    JAI16273.1    KQ979608    KYN20345.1    KQ760712    OAD59300.1    EF541362    ABQ18252.1    KQ976542    KYM81081.1    KQ981965    KYN31717.1    ADTU01022553    AAAB01008816    EAA05130.3    GBHO01035022    GBRD01015415    GDHC01012318    JAG08582.1    JAG50411.1    JAQ06311.1    KQ977574    KYN01864.1    RSAL01000184    RVE44846.1    GAPW01004725    JAC08873.1    LBMM01002207    KMQ95142.1    KA647976    AFP62605.1    KK854272    PTY14037.1    GFDF01004161    JAV09923.1    GL442166    EFN63866.1    BT128597    KB631615    AEE63554.1    ERL84675.1    CH477304    EAT44167.1    GFDL01011846    JAV23199.1    NNAY01000065    OXU31369.1    AXCM01000599    GAKP01012081    JAC46871.1    GBXI01011918    JAD02374.1    GDHF01010804    JAI41510.1    GEMB01002656    JAS00536.1    GFDL01011507    JAV23538.1    GGFJ01009669    MBW58810.1    GL451420    EFN79350.1    GGFK01007406    MBW40727.1    GAMC01013263    JAB93292.1    AXCN02001728    GGFM01007017    MBW27768.1    ATLV01013235    KE524847    KFB37541.1    KQ414637    KOC66934.1    JXJN01008196    CCAG010000815    EZ423365    ADD19641.1    DS232256    EDS38552.1    GALA01000051    JAA94801.1    JRES01000238    KNC33063.1    KK107499    QOIP01000003    EZA49770.1    RLU25250.1    ACPB03006253    GAMD01002585    JAA99005.1    GFDG01000434    JAV18365.1    ADMH02002090    ETN59367.1    UFQT01000027    SSX18104.1    GEZM01004809    JAV96304.1    CH902617    EDV42773.1    CH940650    EDW66802.1    CP012526    ALC46372.1    GANO01001771    JAB58100.1    CH954181    EDV49529.1    GL765434    EFZ16415.1    CM000070    EAL29135.1    CH479185    EDW38463.1    CH964232    EDW80943.1    LRGB01001005    KZS13933.1    KB199650    ESP05358.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000037510    UP000192223    UP000092462    + More
UP000007266    UP000235965    UP000242457    UP000005203    UP000007755    UP000076407    UP000075840    UP000076502    UP000075809    UP000078492    UP000078540    UP000078541    UP000005205    UP000075882    UP000007062    UP000075903    UP000078542    UP000283053    UP000036403    UP000095301    UP000000311    UP000030742    UP000008820    UP000075900    UP000075885    UP000215335    UP000002358    UP000075883    UP000075881    UP000008237    UP000075886    UP000030765    UP000076408    UP000075880    UP000075884    UP000053825    UP000078200    UP000092443    UP000092460    UP000092445    UP000092444    UP000095300    UP000002320    UP000075920    UP000037069    UP000053097    UP000279307    UP000015103    UP000069272    UP000000673    UP000091820    UP000075901    UP000007801    UP000008792    UP000092553    UP000008711    UP000001819    UP000008744    UP000007798    UP000076858    UP000030746   

PRIDE

Q1HPR2   

Pfam

PF02996   Prefoldin        + More
PF00098   zf-CCHC

Interpro

IPR009053   Prefoldin        + More
IPR016655   PFD3       
IPR004127   Prefoldin_subunit_alpha       
IPR001878   Znf_CCHC       

Gene 3D

1.10.287.370    

ProteinModelPortal

Q1HPR2   A0A1E1W6U4   A0A2H1VZL9   A0A212FJJ2   S4PMW8   A0A194PLE7   + More
A0A194QN45   A0A0T6B5M5   A0A0L7KN64   A0A1B6HUG4   A0A1B6EQU3   A0A1W4X796   A0A0C9RP12   A0A1B0CZU0   D6WA44   A0A2J7PBH9   A0A2A3EHF6   A0A088AJ58   A0A1B6KKZ5   F4WP05   A0A182X5L9   A0A182HWD0   A0A154NX73   A0A151WM43   A0A0K8TQ52   A0A195E581   A0A310SE73   A5HMP5   A0A195B969   A0A195EUZ8   A0A158NPH9   A0A1S4H5Y6   A0A182KL61   Q7QHF3   A0A0A9WJH4   A0A182UTM6   A0A195CP28   A0A3S2P922   A0A023EHL6   A0A0J7KXA6   T1PGU4   A0A2R7W2Q5   A0A1L8DTZ4   E2ARQ8   J3JZB6   Q17CV4   A0A1Q3F6P6   A0A182RTD7   A0A182NZL6   A0A232FLI8   K7J5F1   A0A182LRI1   A0A034VU72   A0A0A1WTJ0   A0A182JS11   A0A0K8VSE9   A0A161MH09   A0A1Q3F7S9   A0A2M4C0H7   E2BY71   A0A2M4AJ09   W8B403   A0A182QLB8   A0A2M3ZH56   A0A084VHU7   A0A182YB30   A0A182IY41   A0A182N2C3   A0A0L7R7W2   A0A1A9V4P5   A0A1A9XHK7   A0A1B0B480   A0A1A9ZLY0   D3TPL3   A0A1I8PPW1   B0X1A3   T1DJU6   A0A182WDI1   A0A0L0CL29   A0A026W120   T1HC31   T1DNT8   A0A182FKK1   A0A1L8EI82   W5J4H1   A0A1A9WT45   A0A336LIZ2   A0A182T7T2   A0A1Y1NEA9   B3LXC9   B4LXL8   A0A0M4EQ46   U5EVQ5   B3NZF6   E9IST8   Q293S9   B4GLN9   B4NAX9   A0A164X734   V4B4G6  

KEGG

732997    no KO assigned | (RefSeq) prefoldin subunit 3

GO

GO:0016272   GO:0006457   GO:0005844   GO:0007017   GO:0015631   GO:0007021   GO:0005737   GO:0007098   GO:0090307   GO:0045196   GO:0090306   GO:0048487   GO:0022857   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

PANTHER

PTHR12409  

Length:

187

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0012

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03996

outside

1  -  187

 

 

Pi

193.71185

Theta

153.455529

Tajima's D

0.408877

CLR

0.541013

CSRT

0.486325683715814

Interpretation

Uncertain