Gene

KWMTBOMO13710  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011012

Annotation

PREDICTED:_organic_cation_transporter_protein_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr23(-):7382119-7398734      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.851

CDS

ATGACGGCTGGTATGCATATGCTGTCTTTAGTGACAGTGGCCGCAGTTCCGGATCACAGATGCTTCCTACACGGAATTGACAGCTACAATGCCACAAATTCATGGAACTCTTCTTTGGTAATGGCAGCTATTCCAGTGAATGAAAATGACAAATTTGATTCGTGCAGAATGTACACAAGGAACCACACATCTACGGCGGAATGTGAATCTTGGGTTTACAACACGCAGTACTTTTCTTCTTCTAGGGGTATTGAATGGAATTTTGTATGCAATCAGCGTTGGATGGGCGCTATCGCTCAAACCGTTTACATGTTTGGCGTTGTGGGTGGCTCTCTCATATTTGGTCGAATATCTGATAAATATGGAAGGAAAACTGCCTTTGTATGGTCTGGAGTTATGCAATTGCTGCTCGGAGTTTTGGTTGCATTAACAAATGAATACTACTCTTTCTTAGTTGTCAGATTTATATATGGAATATTTGGATCGGGAGCATATATTACTGGATTCGTATTAACGATGGAACTCGTCGGACCAAGCAAACGAACAATTTGCGGGGTTACATTTCAAGTAATGTTCGCAATCGGGATTATGTTAGTTCCTGCTTGGGGATATTTAATTGATAATAGATTTTACTTGCAAATACTGTATGGTCTGCACGCAGCTCTGTTACTTCCGCACTGGTTTATAATGGACGAGTCCCCAAGGTGGCTTTGGTCACAAGGCCGTGCTCGAGAATCGGTCGCAATAATTGAAAAAGCGTTGAAGATGAACGGTATAACTGAGAACATAGATACGTCTTCTTTAATTTCACAATGTAAAGCGACAAATGCAAAATATTCAGATGAACAATCTGCGGGCACGAATGATCTTTTCAAGACTCCAAGAATGTTGAAGAAAACTCTTATAATTTGCGGATGCTGGTTCACAAACTCCGTTGTCTATTATGGGATTTCATTGAACGCTGGAAAATTAAATGGAAACCCATATTTTCTTATGTTCTTAATGGGTATCGTAGAGTTACCTAGCTATGTAATTATAACTTACTTCTTGGACCGGGTTGGACACAGAGCTCTTATTAGTACAATGATGTTGCTAGGTGGAATAGCATGTTTGGTTATATTCTTTCTTCCTCATGGATCTATAACTACCACTGGAATGGTAATGGTAGGAAAGCTTTTCATTTCAGGTTCATTCTCTATTATTTACAAGTATTCTGCAGAATTATTCCCGACCGTTGTTCGTAGTTCTGGAGTTGGTCTGGGCAGTATGTGCGCCAGTGTGTCCGGAGCTTTAACCCCCCTGATAAATTTATTAGATACCCTAAATCCCAAGATTCCGACTATTTTATTCGGATTTTTGGCTTTATTCTCTGGGTTCTCTACTTTCTTCTTACCGGAAACCATTGGCCGCCACTTACCCCAATCTCTGGAAGATGGAGAAAAATTCGGAATCGGCGACAATTGTTTCACCAACTGCAGTGGTCAGCCACTGACTGATAGTATTCCCGATATTCCTGAAACCATGGTTCCTCTAGATGAAAACAAGAAAACAAAGGAATAA

Protein

MTAGMHMLSLVTVAAVPDHRCFLHGIDSYNATNSWNSSLVMAAIPVNENDKFDSCRMYTRNHTSTAECESWVYNTQYFSSSRGIEWNFVCNQRWMGAIAQTVYMFGVVGGSLIFGRISDKYGRKTAFVWSGVMQLLLGVLVALTNEYYSFLVVRFIYGIFGSGAYITGFVLTMELVGPSKRTICGVTFQVMFAIGIMLVPAWGYLIDNRFYLQILYGLHAALLLPHWFIMDESPRWLWSQGRARESVAIIEKALKMNGITENIDTSSLISQCKATNAKYSDEQSAGTNDLFKTPRMLKKTLIICGCWFTNSVVYYGISLNAGKLNGNPYFLMFLMGIVELPSYVIITYFLDRVGHRALISTMMLLGGIACLVIFFLPHGSITTTGMVMVGKLFISGSFSIIYKYSAELFPTVVRSSGVGLGSMCASVSGALTPLINLLDTLNPKIPTILFGFLALFSGFSTFFLPETIGRHLPQSLEDGEKFGIGDNCFTNCSGQPLTDSIPDIPETMVPLDENKKTKE

Uniprot

H9JNA9   A0A2H1VCG7   A0A0L7LRI0   A0A194PLE2   A0A194QMN2   A0A212FJK2   + More
A0A2A4J2Z5   A0A1I8M620   T1PFX4   A0A084WAL6   A0A182RIT6   A0A1I8PLQ6   A0A1L8EFV0   A0A182VJP9   A0A182HYF0   A0A182LPX9   A0A182WUV5   A0A182J953   A0A182UC81   A0A182YF87   B3P0Z4   A0A182QVY2   Q7Q8X0   B4NKZ9   A0A182VT64   Q294V9   B4PR27   B3MTU9   A0A182K4T8   A0A2M4ACZ2   B4HLC5   A0A2M4ABC8   Q961R9   A0A182FTH7   T1DSK2   A0A0M3QX72   A0A2M4CUC2   A0A2M3Z135   A0A2M4BJB2   A0A182MLM8   A0A2M3Z0U5   A0A2M4CUK7   A0A2M3ZKS7   B0X0R5   A0A0L0BNY0   B4KA02   A0A182NDC5   A0A3B0KF16   A0A1W4VFN7   A0A2H1VCJ0   A0A0T6B785   B4QX65   U5EUX6   A0A1Q3FFR9   A0A1Q3FBY2   A0A1Q3FFU4   A0A1Q3FC36   A0A023ETV6   A0A182PJ93   B4LXZ8   A0A3B0JTC4   Q17MW7   H9JNB0   B4JG18   A0A1B0C9K9   A0A1S4H482   A0A1B0GCT6   A0A1A9ZM58   A0A034WJ19   A0A1B0D350   A0A0K8UQD0   A0A0A1X2V9   W8AV18   A0A1L8DER9   A0A1L8DEC5   A0A1A9VAZ8   A0A1A9WHP3   A0A194QMM0   D6WAW4   A0A154PMR9   A0A1B6KJY1   A0A1A9XU90   A0A1B0BNC8   A0A1B6H694   A0A1B6G772   A0A1J1IED5   A0A310SKE6   A0A0K8TNM3   A0A026VYB7   A0A067RHW4   A0A2A3EJV7   A0A1W4XL70   A0A087ZUB5   E9JC16   N6TSC1   A0A0L7QWS4   A0A1W4XLF5   E2BB78   A0A1Y1JWN7   A0A1Y1JSF9  

Pubmed

19121390    26227816    26354079    22118469    25315136    24438588    + More
20966253    25244985    17994087    12364791    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    24945155    17510324    25348373    25830018    24495485    18362917    19820115    26369729    24508170    30249741    24845553    21282665    23537049    20798317    28004739   

EMBL

BABH01019619    BABH01019620    ODYU01001804    SOQ38505.1    JTDY01000250    KOB78065.1    + More
KQ459600    KPI94147.1    KQ461195    KPJ06782.1    AGBW02008253    OWR53915.1    NWSH01003372    PCG66435.1    KA647574    AFP62203.1    ATLV01022206    KE525330    KFB47260.1    GFDG01001231    JAV17568.1    APCN01005901    CH954181    EDV49113.1    AXCN02001770    AAAB01008933    EAA09977.4    CH964272    EDW84202.1    CM000070    EAL28854.1    CM000160    EDW97349.1    CH902623    EDV30230.1    GGFK01005333    MBW38654.1    CH480815    EDW41945.1    GGFK01004739    MBW38060.1    AE014297    AY051412    AAF55286.3    AAK92836.1    GAMD01001444    JAB00147.1    CP012526    ALC45359.1    GGFL01004766    MBW68944.1    GGFM01001482    MBW22233.1    GGFJ01003900    MBW53041.1    AXCM01018489    GGFM01001401    MBW22152.1    GGFL01004767    MBW68945.1    GGFM01008352    MBW29103.1    DS232244    EDS38307.1    JRES01001582    KNC21762.1    CH933806    EDW15650.1    OUUW01000008    SPP83651.1    SOQ38506.1    LJIG01009436    KRT83083.1    CM000364    EDX12719.1    GANO01002130    JAB57741.1    GFDL01008645    JAV26400.1    GFDL01009959    JAV25086.1    GFDL01008631    JAV26414.1    GFDL01009966    JAV25079.1    GAPW01000803    JAC12795.1    CH940650    EDW66864.1    SPP83652.1    CH477203    EAT48035.1    CH916369    EDV92557.1    AJWK01002452    CCAG010002229    GAKP01004615    JAC54337.1    AJVK01023277    GDHF01023410    JAI28904.1    GBXI01009284    JAD05008.1    GAMC01016458    GAMC01016457    JAB90097.1    GFDF01009199    JAV04885.1    GFDF01009288    JAV04796.1    KPJ06783.1    KQ971312    EEZ98694.2    KQ434984    KZC13133.1    GEBQ01028242    JAT11735.1    JXJN01017337    GECU01037556    JAS70150.1    GECZ01011489    JAS58280.1    CVRI01000047    CRK97916.1    KQ760397    OAD60671.1    GDAI01001882    JAI15721.1    KK107589    QOIP01000001    EZA48635.1    RLU27563.1    KK852463    KDR23392.1    KZ288223    PBC31978.1    GL771642    EFZ09637.1    APGK01053945    KB741239    KB632275    ENN72140.1    ERL91114.1    KQ414710    KOC62989.1    GL446946    EFN87051.1    GEZM01101932    JAV52200.1    GEZM01101933    JAV52199.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000218220    + More
UP000095301    UP000030765    UP000075900    UP000095300    UP000075903    UP000075840    UP000075882    UP000076407    UP000075880    UP000075902    UP000076408    UP000008711    UP000075886    UP000007062    UP000007798    UP000075920    UP000001819    UP000002282    UP000007801    UP000075881    UP000001292    UP000000803    UP000069272    UP000092553    UP000075883    UP000002320    UP000037069    UP000009192    UP000075884    UP000268350    UP000192221    UP000000304    UP000075885    UP000008792    UP000008820    UP000001070    UP000092461    UP000092444    UP000092445    UP000092462    UP000078200    UP000091820    UP000007266    UP000076502    UP000092443    UP000092460    UP000183832    UP000053097    UP000279307    UP000027135    UP000242457    UP000192223    UP000005203    UP000019118    UP000030742    UP000053825    UP000008237   

PRIDE

H9JNA9    Q961R9    H9JNB0   

Pfam

PF00083   Sugar_tr

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR001190   SRCR       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JNA9   A0A2H1VCG7   A0A0L7LRI0   A0A194PLE2   A0A194QMN2   A0A212FJK2   + More
A0A2A4J2Z5   A0A1I8M620   T1PFX4   A0A084WAL6   A0A182RIT6   A0A1I8PLQ6   A0A1L8EFV0   A0A182VJP9   A0A182HYF0   A0A182LPX9   A0A182WUV5   A0A182J953   A0A182UC81   A0A182YF87   B3P0Z4   A0A182QVY2   Q7Q8X0   B4NKZ9   A0A182VT64   Q294V9   B4PR27   B3MTU9   A0A182K4T8   A0A2M4ACZ2   B4HLC5   A0A2M4ABC8   Q961R9   A0A182FTH7   T1DSK2   A0A0M3QX72   A0A2M4CUC2   A0A2M3Z135   A0A2M4BJB2   A0A182MLM8   A0A2M3Z0U5   A0A2M4CUK7   A0A2M3ZKS7   B0X0R5   A0A0L0BNY0   B4KA02   A0A182NDC5   A0A3B0KF16   A0A1W4VFN7   A0A2H1VCJ0   A0A0T6B785   B4QX65   U5EUX6   A0A1Q3FFR9   A0A1Q3FBY2   A0A1Q3FFU4   A0A1Q3FC36   A0A023ETV6   A0A182PJ93   B4LXZ8   A0A3B0JTC4   Q17MW7   H9JNB0   B4JG18   A0A1B0C9K9   A0A1S4H482   A0A1B0GCT6   A0A1A9ZM58   A0A034WJ19   A0A1B0D350   A0A0K8UQD0   A0A0A1X2V9   W8AV18   A0A1L8DER9   A0A1L8DEC5   A0A1A9VAZ8   A0A1A9WHP3   A0A194QMM0   D6WAW4   A0A154PMR9   A0A1B6KJY1   A0A1A9XU90   A0A1B0BNC8   A0A1B6H694   A0A1B6G772   A0A1J1IED5   A0A310SKE6   A0A0K8TNM3   A0A026VYB7   A0A067RHW4   A0A2A3EJV7   A0A1W4XL70   A0A087ZUB5   E9JC16   N6TSC1   A0A0L7QWS4   A0A1W4XLF5   E2BB78   A0A1Y1JWN7   A0A1Y1JSF9  

PDB

4LDS     E-value=1.25103e-06,     Score=126

KEGG

101745642    no KO assigned | (RefSeq) organic cation transporter protein

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005044   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930   GO:0055085  

Length:

519

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

227.4628

Exp number, first 60 AAs:

0.06981

Total prob of N-in:

0.09289

inside

1  -  93

TMhelix

94  -  116

outside

117  -  125

TMhelix

126  -  143

inside

144  -  149

TMhelix

150  -  172

outside

173  -  186

TMhelix

187  -  206

inside

207  -  300

TMhelix

301  -  318

outside

319  -  327

TMhelix

328  -  350

inside

351  -  356

TMhelix

357  -  376

outside

377  -  379

TMhelix

380  -  402

inside

403  -  414

TMhelix

415  -  437

outside

438  -  446

TMhelix

447  -  464

inside

465  -  519

 

 

Pi

222.855675

Theta

185.127584

Tajima's D

0.67638

CLR

0.158537

CSRT

0.571421428928554

Interpretation

Uncertain