Gene

KWMTBOMO13709  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011013

Annotation

PREDICTED:_organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(-):7377675-7398734      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.912

CDS

ATGTATCAAGATAATGATACGATTACTTGCACCAAGTGGGTTTTCGATACAACATATAGATCTTCATCGCATGCTATAGAATGGAATTTAGTTTGTGAACAAAGATGGCTGGGCTCTTTTGTGCAAACTGTGTACATGCTCGGGGTGTTCACTGGTGCTGTAACTTTGGGGACAATGGCCGATAAATATGGTAGAAAAACTATTTTCTGTTGGTCAGGCGTATTACAACTCATATTCGGTGTCGCGGTTGCTTTCATTCCGGAGTACTGGACATTTCTAGTCATTCGCTTTTTGTATGGTGTTTTCGGGTCAGCCGGTTCATATATAACTGGATTCGTTTTGACAATGGAACTTGTTGGACCGAGTAAAAGAACCAGTTGTGGTGTAGCTTTCCAGGCAGCATTTGCTGCTGGGATTATGTTAGTAGCAGGCTGGGGAGCATTGATTGATAACAGACAAATCCTTCAAATGATCTACGGCTTACACAGCTTACTTTTAATCCCACATATCTGGATCATGGATGAATCTCCTCGTTGGCTTTGGGCTCAAGGCCGTGTCAAAGAATCTGTCGACATCGTTGAAAAAGCTTTAAAATGTAATAACTCTGAAAATATAGACAAAGCACATTTCGTTTCAAGAGGAAAAGTTGAATCGTGTAAAGGATCTGAAGCTGCCACTACAGCTGGCACAACTGACTTGTTCAAAACCCCAAATTTACGAATAAAAACTTTGAATGTATGCTTTTGTTGGTTTGCAAACTCTATTGCCTATTATGGGCTAACTCTTAGTACAGGAAAGTTAGAAGGTAATCCATATCTCATTACGGCAATCATGGGATTTGTTGAATTTCCGAGTTATGGGGCTGTGATATACTTTCTCGATATTTGGGGTAGGAGACCGCTTATAAGTTCTATGATGCTCGTGGGTGGAATTGCATGTGTTGTTGCCACATTTTTACCAGCCGGCAGTATAATTTCAACTGCGATAGTAATAGCAGGAAAATTGTTCATTGCGGGTTCATTTGCCATCATCTATAACTATTCAGCTGAATTGTTCCCTACTGTTGTTCGTAATTCTGCTTTGGGCTTAGGTTCAATGTGTGCCAGGTTTTCAGGGGCTTTGACACCCCTAATAACGTTATTAGATTCTTTCAATCCAAAAATCCCTGCTGTCACCTTTGGAGCGTTAGCGGTTATATCAGGATTTTTGTGCTTCTTTTTGCCAGAAACGATGAATCAGCCTATGCCTCAATCGTTAACCGATGGTGAAGAATTCGGTAAGGGAGATACTATTTTTGCGAGTTGTTTTGGAAAGGAGAAAAATAGAAAATATGATGATAAAGCTGATGATAAAGCTGCCGAATCAATGGTTCCATTAGAAGATGTAAGTAAAAAGGTTTAA

Protein

MYQDNDTITCTKWVFDTTYRSSSHAIEWNLVCEQRWLGSFVQTVYMLGVFTGAVTLGTMADKYGRKTIFCWSGVLQLIFGVAVAFIPEYWTFLVIRFLYGVFGSAGSYITGFVLTMELVGPSKRTSCGVAFQAAFAAGIMLVAGWGALIDNRQILQMIYGLHSLLLIPHIWIMDESPRWLWAQGRVKESVDIVEKALKCNNSENIDKAHFVSRGKVESCKGSEAATTAGTTDLFKTPNLRIKTLNVCFCWFANSIAYYGLTLSTGKLEGNPYLITAIMGFVEFPSYGAVIYFLDIWGRRPLISSMMLVGGIACVVATFLPAGSIISTAIVIAGKLFIAGSFAIIYNYSAELFPTVVRNSALGLGSMCARFSGALTPLITLLDSFNPKIPAVTFGALAVISGFLCFFLPETMNQPMPQSLTDGEEFGKGDTIFASCFGKEKNRKYDDKADDKAAESMVPLEDVSKKV

Uniprot

H9JNB0   A0A2A4J2Z5   A0A2H1VCJ0   A0A0L7LRI0   A0A194QMM0   A0A212FJK2   + More
A0A1I8M620   A0A1I8PLQ6   T1PFX4   A0A1L8EFV0   A0A0L0BNY0   Q294V9   A0A1A9WHP3   A0A1A9VAZ8   A0A3B0KF16   A0A3B0JTC4   A0A182MLM8   A0A1A9ZM58   B3P0Z4   A0A2M4ACZ2   A0A2M4ABC8   B4PR27   Q961R9   A0A1B0GCT6   B4HLC5   B0X0R5   A0A182VJP9   A0A182RIT6   A0A182UC81   A0A182FTH7   A0A182VT64   A0A182HYF0   A0A182LPX9   A0A182WUV5   W8AV18   Q7Q8X0   A0A1S4H482   A0A1W4VFN7   A0A1A9XU90   T1DSK2   A0A1B0BNC8   A0A2M4BJB2   A0A084WAL6   A0A2M4CUC2   A0A2M4CUK7   B3MTU9   A0A0K8UQD0   A0A034WJ19   A0A182QVY2   A0A1Q3FBY2   A0A1Q3FFR9   B4NKZ9   A0A182K4T8   A0A2M3ZKS7   A0A1B0C9K9   A0A1Q3FFU4   A0A1Q3FC36   A0A182PJ93   A0A2M3Z135   B4QX65   A0A2M3Z0U5   A0A0A1X2V9   B4LXZ8   A0A182NDC5   A0A182YF87   A0A182J953   A0A0K8TNM3   Q17MW7   A0A1L8DER9   A0A1L8DEC5   A0A023ETV6   B4JG18   A0A182GTY7   A0A0T6B785   A0A0M3QX72   A0A1B0D350   D6WAW4   B4KA02   U5EUX6   A0A1L8E830   A0A1J1IED5   A0A1B6KJY1   A0A1W4XL70   A0A1W4XLF5   A0A1B6H694   A0A1B6G772   A0A0C9QJZ0   K7J2E4   H9JNA9   A0A194PLE2   A0A2H1VCG7   A0A194QMN2   N6TSC1   A0A0L7QWS4   A0A067RHW4   A0A154PMR9   E2BB78   T1HI94   A0A0P4VR49   E9JC16  

Pubmed

19121390    26227816    26354079    22118469    25315136    26108605    + More
15632085    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20966253    24495485    12364791    24438588    25348373    25830018    25244985    26369729    17510324    24945155    26483478    18362917    19820115    20075255    23537049    24845553    20798317    27129103    21282665   

EMBL

BABH01019619    NWSH01003372    PCG66435.1    ODYU01001804    SOQ38506.1    JTDY01000250    + More
KOB78065.1    KQ461195    KPJ06783.1    AGBW02008253    OWR53915.1    KA647574    AFP62203.1    GFDG01001231    JAV17568.1    JRES01001582    KNC21762.1    CM000070    EAL28854.1    OUUW01000008    SPP83651.1    SPP83652.1    AXCM01018489    CH954181    EDV49113.1    GGFK01005333    MBW38654.1    GGFK01004739    MBW38060.1    CM000160    EDW97349.1    AE014297    AY051412    AAF55286.3    AAK92836.1    CCAG010002229    CH480815    EDW41945.1    DS232244    EDS38307.1    APCN01005901    GAMC01016458    GAMC01016457    JAB90097.1    AAAB01008933    EAA09977.4    GAMD01001444    JAB00147.1    JXJN01017337    GGFJ01003900    MBW53041.1    ATLV01022206    KE525330    KFB47260.1    GGFL01004766    MBW68944.1    GGFL01004767    MBW68945.1    CH902623    EDV30230.1    GDHF01023410    JAI28904.1    GAKP01004615    JAC54337.1    AXCN02001770    GFDL01009959    JAV25086.1    GFDL01008645    JAV26400.1    CH964272    EDW84202.1    GGFM01008352    MBW29103.1    AJWK01002452    GFDL01008631    JAV26414.1    GFDL01009966    JAV25079.1    GGFM01001482    MBW22233.1    CM000364    EDX12719.1    GGFM01001401    MBW22152.1    GBXI01009284    JAD05008.1    CH940650    EDW66864.1    GDAI01001882    JAI15721.1    CH477203    EAT48035.1    GFDF01009199    JAV04885.1    GFDF01009288    JAV04796.1    GAPW01000803    JAC12795.1    CH916369    EDV92557.1    JXUM01018374    KQ560511    KXJ82048.1    LJIG01009436    KRT83083.1    CP012526    ALC45359.1    AJVK01023277    KQ971312    EEZ98694.2    CH933806    EDW15650.1    GANO01002130    JAB57741.1    GFDG01004013    JAV14786.1    CVRI01000047    CRK97916.1    GEBQ01028242    JAT11735.1    GECU01037556    JAS70150.1    GECZ01011489    JAS58280.1    GBYB01003849    JAG73616.1    AAZX01007551    BABH01019620    KQ459600    KPI94147.1    SOQ38505.1    KPJ06782.1    APGK01053945    KB741239    KB632275    ENN72140.1    ERL91114.1    KQ414710    KOC62989.1    KK852463    KDR23392.1    KQ434984    KZC13133.1    GL446946    EFN87051.1    ACPB03001247    GDKW01002265    JAI54330.1    GL771642    EFZ09637.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000095301    + More
UP000095300    UP000037069    UP000001819    UP000091820    UP000078200    UP000268350    UP000075883    UP000092445    UP000008711    UP000002282    UP000000803    UP000092444    UP000001292    UP000002320    UP000075903    UP000075900    UP000075902    UP000069272    UP000075920    UP000075840    UP000075882    UP000076407    UP000007062    UP000192221    UP000092443    UP000092460    UP000030765    UP000007801    UP000075886    UP000007798    UP000075881    UP000092461    UP000075885    UP000000304    UP000008792    UP000075884    UP000076408    UP000075880    UP000008820    UP000001070    UP000069940    UP000249989    UP000092553    UP000092462    UP000007266    UP000009192    UP000183832    UP000192223    UP000002358    UP000053268    UP000019118    UP000030742    UP000053825    UP000027135    UP000076502    UP000008237    UP000015103   

PRIDE

H9JNB0    Q961R9    H9JNA9   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR001190   SRCR       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9JNB0   A0A2A4J2Z5   A0A2H1VCJ0   A0A0L7LRI0   A0A194QMM0   A0A212FJK2   + More
A0A1I8M620   A0A1I8PLQ6   T1PFX4   A0A1L8EFV0   A0A0L0BNY0   Q294V9   A0A1A9WHP3   A0A1A9VAZ8   A0A3B0KF16   A0A3B0JTC4   A0A182MLM8   A0A1A9ZM58   B3P0Z4   A0A2M4ACZ2   A0A2M4ABC8   B4PR27   Q961R9   A0A1B0GCT6   B4HLC5   B0X0R5   A0A182VJP9   A0A182RIT6   A0A182UC81   A0A182FTH7   A0A182VT64   A0A182HYF0   A0A182LPX9   A0A182WUV5   W8AV18   Q7Q8X0   A0A1S4H482   A0A1W4VFN7   A0A1A9XU90   T1DSK2   A0A1B0BNC8   A0A2M4BJB2   A0A084WAL6   A0A2M4CUC2   A0A2M4CUK7   B3MTU9   A0A0K8UQD0   A0A034WJ19   A0A182QVY2   A0A1Q3FBY2   A0A1Q3FFR9   B4NKZ9   A0A182K4T8   A0A2M3ZKS7   A0A1B0C9K9   A0A1Q3FFU4   A0A1Q3FC36   A0A182PJ93   A0A2M3Z135   B4QX65   A0A2M3Z0U5   A0A0A1X2V9   B4LXZ8   A0A182NDC5   A0A182YF87   A0A182J953   A0A0K8TNM3   Q17MW7   A0A1L8DER9   A0A1L8DEC5   A0A023ETV6   B4JG18   A0A182GTY7   A0A0T6B785   A0A0M3QX72   A0A1B0D350   D6WAW4   B4KA02   U5EUX6   A0A1L8E830   A0A1J1IED5   A0A1B6KJY1   A0A1W4XL70   A0A1W4XLF5   A0A1B6H694   A0A1B6G772   A0A0C9QJZ0   K7J2E4   H9JNA9   A0A194PLE2   A0A2H1VCG7   A0A194QMN2   N6TSC1   A0A0L7QWS4   A0A067RHW4   A0A154PMR9   E2BB78   T1HI94   A0A0P4VR49   E9JC16  

PDB

4LDS     E-value=1.39946e-06,     Score=125

KEGG

101745642    no KO assigned | (RefSeq) organic cation transporter protein

GO

GO:0022857   GO:0016021   GO:0008643   GO:0005044   GO:0005215   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930   GO:0055085  

Length:

466

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

217.68757

Exp number, first 60 AAs:

20.11458

Total prob of N-in:

0.71258

POSSIBLE N-term signal

sequence

inside

1  -  35

TMhelix

36  -  58

outside

59  -  67

TMhelix

68  -  90

inside

91  -  96

TMhelix

97  -  119

outside

120  -  128

TMhelix

129  -  149

inside

150  -  243

TMhelix

244  -  261

outside

262  -  270

TMhelix

271  -  293

inside

294  -  299

TMhelix

300  -  319

outside

320  -  322

TMhelix

323  -  345

inside

346  -  357

TMhelix

358  -  380

outside

381  -  389

TMhelix

390  -  407

inside

408  -  466

 

 

Pi

237.024405

Theta

187.150827

Tajima's D

0.840449

CLR

0.158537

CSRT

0.613469326533673

Interpretation

Uncertain