Gene

KWMTBOMO13703  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011092

Annotation

PREDICTED:_ribosome_production_factor_2_homolog_[Papilio_polytes]

Location

Bomo_Chr23(+):7261525-7264279      View in EpiBrowser

Full name

Ribosome production factor 2 homolog      

Alternative Name

Brix domain-containing protein 1 homolog
Novel nucleolar protein 3
Ribosome biogenesis protein RPF2 homolog

Location in the cell

Mitochondrial   Reliability : 1.736 Nuclear   Reliability : 2.258

CDS

ATGCCTGTGCTACAAAGAATAAAGAAACCTACAACTCGTAAAGGAAAAAAGGTTCTACTATCGAAAGAACCTAAGCCCATTGAAGGTCCTAAACAAAGTATCTTCCTTCAAGGCCGCAACCCGTCAGAAAGGACAAGAAAGCTACTAAAGGATATCTATGATTTAAAAAAGCCTGACGCCGCTTATCTCAGCCGCAAAAACGATTTTGTCCCATTTGAAGACAGTAGTTTGATTGAGAAGTTATGTTACAAAAAAGAGGCGGCTCTGTTTGGTGTTGGTTCACACAGCAAGAAGCGCCCCCACAACATTGTTTTGGGTAGAACTTTTGATTATGGAATATTGGATATGATTGAACTTGGTACTGAAGAATACAAGGCAATGTCAGAATTTCACAATATAAAAGTCCTGGCTGGTTCTAAACCATGTTTATTGTTTAATGGACCTGCTTGGGAGCTAAACCAGGATTTAACACGATTGAAGTCACTGTTCTCTGATTTCTTTCACAGAGAAAAGGTGGAAACCATTAGATTGCAGGGATTAGAACATGTCCTCAGTTTCACGGCTACTGATGATGGCTTGATCTACTTCAGATCGTACAGAATATCACTTAAGAAAAGTGGCCAGAGAACACCCAGAGTGGAGTTGGAAGAAATAGGTCCGTCAATTGATTTCAAATTAAGAAGAACTAAGTTAGCGTCTGACGATCTCTACAAGGAAGCTTGTAAAATACCGAGAGAGATGAAACCAATCAAAAAGAAAAATATCTCCAGAGATGCATTTGGAACTAAACACGGCCGTATTCATATGGGTAAGCAAGATATCAATAGGCTGCAAACCCGAAAGATGAAGGGCTTAAAGAAAACAACCGAAGAAAAGAAAAAAATACTTCTTCAGAAAAAGAAAGATAAGAAAGCAGCAAAACAAAAACAACATGTAGAAGTATAA

Protein

MPVLQRIKKPTTRKGKKVLLSKEPKPIEGPKQSIFLQGRNPSERTRKLLKDIYDLKKPDAAYLSRKNDFVPFEDSSLIEKLCYKKEAALFGVGSHSKKRPHNIVLGRTFDYGILDMIELGTEEYKAMSEFHNIKVLAGSKPCLLFNGPAWELNQDLTRLKSLFSDFFHREKVETIRLQGLEHVLSFTATDDGLIYFRSYRISLKKSGQRTPRVELEEIGPSIDFKLRRTKLASDDLYKEACKIPREMKPIKKKNISRDAFGTKHGRIHMGKQDINRLQTRKMKGLKKTTEEKKKILLQKKKDKKAAKQKQHVEV

Description

Required for normal assembly of the mitotic spindle. May be involved in both centrosome-dependent and centrosome-independent spindle assembly programs.

Similarity

Belongs to the RPF2 family.

Keywords

Cell cycle   Cell division   Complete proteome   Mitosis   Nucleus   Reference proteome  

Feature

chain  Ribosome production factor 2 homolog

Uniprot

H9JNI8   A0A2A4K9R8   A0A2H1VGJ6   A0A194PN28   A0A3S2P0R7   A0A212EW46   + More
S4NYG5   A0A1E1W9P2   A0A194QMM5   A0A0L7L5J2   D6X4T7   A0A0T6B583   A0A1B6MBM9   A0A1Y1KIV2   A0A1B6MKD0   A0A1B6EHF1   A0A1W4X6Z3   A0A0K8TM23   R4WDP3   J3JW91   A0A067RHP7   A0A3B0KDU4   A0A1B6K4S0   U4UXA2   N6TZQ3   B4QUH9   Q9VEB3   B4IB87   B3MTR4   B4PL84   B5RJN7   B3NZ94   A0A1W4U888   A0A1I8Q611   A0A1L8DSA2   A0A1I8MDY8   A0A2J7RD94   A0A0L0BXF1   Q293T8   B4GLM9   A0A0A9YU48   B4K7H1   A0A0M4EWG5   B4M0W7   A0A1S4EBH7   B4JI55   A0A0P4VQT9   A0A182JCX9   A0A1Q3EXX5   A0A182F7H0   B4NG98   A0A1B0AD65   A0A2M4BTK0   A0A2M3ZI11   A0A2M4BTB9   W5JFC3   E9J8P5   A0A224XGQ7   A0A182Y4E2   A0A1A9X5R7   A0A2M4ANI8   A0A2M4ANZ7   A0A0V0G9Z4   A0A069DR76   B0X4Q6   A0A1A9UCM1   A0A1A9YS47   A0A1B0BFD0   A0A182SQT8   A0A182QSC7   D3TMH2   A0A195CSW8   A0A182PAC4   A0A151XGA1   A0A1S3HJL7   A0A1B0G0M4   U5EX67   A0A182MK37   A0A182W097   A0A158P3M0   A0A195BZ06   A0A1B0C9J8   A0A1J1IAH9   Q7QDB8   A0A182LFP7   A0A182HUB5   A0A182GNW6   A0A182UV77   A0A034WUE5   A0A182WRG4   R4G320   A0A1S3HGH2   A0A182RNM8   A0A151J8Z0   A0A154P348   A0A0M9A4S6   A0A182KA50   A0A3R7MJ00   W8C2W1  

Pubmed

19121390    26354079    22118469    23622113    26227816    18362917    + More
19820115    28004739    26369729    23691247    22516182    24845553    23537049    17994087    10731132    12537572    12537569    24255106    17550304    25315136    26108605    15632085    25401762    26823975    27129103    20920257    23761445    21282665    25244985    26334808    20353571    21347285    12364791    14747013    17210077    20966253    26483478    25348373    24495485   

EMBL

BABH01019605    NWSH01000020    PCG80716.1    ODYU01002452    SOQ39958.1    KQ459600    + More
KPI94139.1    RSAL01000008    RVE54028.1    AGBW02012077    OWR45720.1    GAIX01013815    JAA78745.1    GDQN01007342    JAT83712.1    KQ461195    KPJ06788.1    JTDY01002812    KOB70675.1    KQ971381    EEZ97244.1    LJIG01009710    KRT82536.1    GEBQ01006683    JAT33294.1    GEZM01082494    JAV61353.1    GEBQ01003567    JAT36410.1    GECZ01032421    JAS37348.1    GDAI01002405    JAI15198.1    AK417714    BAN20929.1    BT127509    AEE62471.1    KK852463    KDR23391.1    OUUW01000008    SPP83846.1    GECU01001260    JAT06447.1    KB632400    ERL94900.1    APGK01045135    APGK01045136    KB741029    ENN74775.1    CM000364    EDX12479.1    AE014297    AY058248    CH480827    EDW44645.1    CH902623    EDV30195.2    CM000160    EDW95866.1    BT044511    ACH95285.1    CH954181    EDV48636.1    GFDF01004827    JAV09257.1    NEVH01005293    PNF38804.1    JRES01001197    KNC24671.1    CM000070    EAL29126.2    CH479185    EDW38453.1    GBHO01009011    GBRD01001806    GDHC01004129    JAG34593.1    JAG64015.1    JAQ14500.1    CH933806    EDW15315.1    CP012526    ALC47880.1    CH940650    EDW68426.1    CH916369    EDV92936.1    GDKW01001732    JAI54863.1    GFDL01014878    JAV20167.1    CH964251    EDW83315.1    GGFJ01007193    MBW56334.1    GGFM01007317    MBW28068.1    GGFJ01007195    MBW56336.1    ADMH02001371    ETN62781.1    GL769036    EFZ10806.1    GFTR01004749    JAW11677.1    GGFK01009035    MBW42356.1    GGFK01009017    MBW42338.1    GECL01002023    JAP04101.1    GBGD01002311    JAC86578.1    DS232350    EDS40473.1    JXJN01013375    AXCN02000238    EZ422624    ADD18900.1    KQ977304    KYN03791.1    KQ982174    KYQ59331.1    CCAG010016722    GANO01002680    JAB57191.1    AXCM01001395    ADTU01008257    KQ976394    KYM93156.1    AJWK01002433    AJWK01002434    CVRI01000047    CRK97264.1    AAAB01008859    EAA07848.5    APCN01000618    JXUM01077274    JXUM01077275    KQ562998    KXJ74674.1    GAKP01001544    JAC57408.1    GAHY01002076    JAA75434.1    KQ979447    KYN21456.1    KQ434809    KZC06252.1    KQ435756    KOX75933.1    QCYY01001460    ROT77903.1    GAMC01002997    GAMC01002995    JAC03559.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000053240    + More
UP000037510    UP000007266    UP000192223    UP000027135    UP000268350    UP000030742    UP000019118    UP000000304    UP000000803    UP000001292    UP000007801    UP000002282    UP000008711    UP000192221    UP000095300    UP000095301    UP000235965    UP000037069    UP000001819    UP000008744    UP000009192    UP000092553    UP000008792    UP000079169    UP000001070    UP000075880    UP000069272    UP000007798    UP000092445    UP000000673    UP000076408    UP000091820    UP000002320    UP000078200    UP000092443    UP000092460    UP000075901    UP000075886    UP000078542    UP000075885    UP000075809    UP000085678    UP000092444    UP000075883    UP000075920    UP000005205    UP000078540    UP000092461    UP000183832    UP000007062    UP000075882    UP000075840    UP000069940    UP000249989    UP000075903    UP000076407    UP000075900    UP000078492    UP000076502    UP000053105    UP000075881    UP000283509   

PRIDE

H9JNI8    Q9VEB3    B5RJN7   

Pfam

PF04427   Brix

Interpro

IPR039770   Rpf2        + More
IPR007109   Brix       

ProteinModelPortal

H9JNI8   A0A2A4K9R8   A0A2H1VGJ6   A0A194PN28   A0A3S2P0R7   A0A212EW46   + More
S4NYG5   A0A1E1W9P2   A0A194QMM5   A0A0L7L5J2   D6X4T7   A0A0T6B583   A0A1B6MBM9   A0A1Y1KIV2   A0A1B6MKD0   A0A1B6EHF1   A0A1W4X6Z3   A0A0K8TM23   R4WDP3   J3JW91   A0A067RHP7   A0A3B0KDU4   A0A1B6K4S0   U4UXA2   N6TZQ3   B4QUH9   Q9VEB3   B4IB87   B3MTR4   B4PL84   B5RJN7   B3NZ94   A0A1W4U888   A0A1I8Q611   A0A1L8DSA2   A0A1I8MDY8   A0A2J7RD94   A0A0L0BXF1   Q293T8   B4GLM9   A0A0A9YU48   B4K7H1   A0A0M4EWG5   B4M0W7   A0A1S4EBH7   B4JI55   A0A0P4VQT9   A0A182JCX9   A0A1Q3EXX5   A0A182F7H0   B4NG98   A0A1B0AD65   A0A2M4BTK0   A0A2M3ZI11   A0A2M4BTB9   W5JFC3   E9J8P5   A0A224XGQ7   A0A182Y4E2   A0A1A9X5R7   A0A2M4ANI8   A0A2M4ANZ7   A0A0V0G9Z4   A0A069DR76   B0X4Q6   A0A1A9UCM1   A0A1A9YS47   A0A1B0BFD0   A0A182SQT8   A0A182QSC7   D3TMH2   A0A195CSW8   A0A182PAC4   A0A151XGA1   A0A1S3HJL7   A0A1B0G0M4   U5EX67   A0A182MK37   A0A182W097   A0A158P3M0   A0A195BZ06   A0A1B0C9J8   A0A1J1IAH9   Q7QDB8   A0A182LFP7   A0A182HUB5   A0A182GNW6   A0A182UV77   A0A034WUE5   A0A182WRG4   R4G320   A0A1S3HGH2   A0A182RNM8   A0A151J8Z0   A0A154P348   A0A0M9A4S6   A0A182KA50   A0A3R7MJ00   W8C2W1  

PDB

6FT6     E-value=1.58712e-47,     Score=477

KEGG

101739710    K14847 ribosome production factor 2 | (RefSeq) ribosome production factor 2 homolog

GO

GO:0019843   GO:0000027   GO:0000470   GO:0000463   GO:0005730   GO:0090307   GO:0051301   GO:0016021  

PANTHER

PTHR12728  

Subcellular location

   Found in the nucleolus during interphase.   With evidence from 2 publications.

Length:

314

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00251

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02546

outside

1  -  314

 

 

Pi

274.050537

Theta

211.525646

Tajima's D

0.831199

CLR

2.669372

CSRT

0.612069396530173

Interpretation

Uncertain