Gene

KWMTBOMO13702  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011016

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Amyelois_transitella]

Location

Bomo_Chr23(-):7231220-7240124      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.925

CDS

ATGCTCGGCATCCTCGTGGGCAATATGCTGTTTGGCCATCTTTCTGACAGATTTGGTCGCAGAACGCCATTCTTAGCAGCAGTATTTCTTCAGCTTATTTCTGGAGTAACAACTGCATATTCGGTAAACTGGTACATGTTTACAACACTTCGCTTCATCCTTGCCGTGGCCACTGGAGGGACTATGGTTACAAGCTTCGTACTCACAATGGAAATAATCGGCGCTAAATACAGAGAGACTGTTGGAATCATTTACCAGATACCTTTTAACCTCGGACACCTATCACTTCCGCTCTTTGGCTACTACTTACGGAATTGGAGCAATTTCCAGTTAGCCATATCATTACCTTCAGTGCTTTTCCTGAGCTATTACTTTTTATTACCGGAATCGCCAAGGTGGCTCTTGACCGTAGGAAAATCGGAAGAAGCTGTTAAGATATTAGAAACTGCAGCAAAAAGAAATGGTTTACCAACCGATAATATTGGTTCGACGACACAGAAAATGGTTGTGGACATAGGAAATAAGTCTGAAGAGCGTGCTTCGTTTTTAGCCTTGTTCAGGACTCCCAAGCTCCGTGCTCGGACAATCGCGATTTGCTACAATTGGTTCGTTTGCGGTCTCTGCTTTTTCGGTGTCTCCCAGTATATCGGACAAGTCTCCGGAAATATTTTTACCAACGTTGCCATATCTGGAGCTATACAGGTCCCCGGAACATTGATCTCGATCTACGCTAATAGAGTCCTAGGAAGGAAAATGACACTAATTATAGCTAACTGCGTCACCGGAATCAGTTGCCTTCTAATAATGGTTGTACCTCGATCAGAAGTAAGCAATTTAATATTAGGTTGTTCCGGTCTTTGGGGACTGAGTATCTCATTCGCCACTGTATACTTGTACGCCGGTGAACTCTTTCCAACTGTAGTAAGAAACTCCGGCGTGGGATTAGCATCGACTGTTGCTAGAATAGGATCTATGGTTGCGCCTTTTGTTGCGACCCTAGGTCACACAAGCGCTTGGCTTCCACCATTGGCTTTTGGGATTGTCCCGTTAATTGGAGCAGGGCTGTGTATCTTATTACCTGATACACGAGGTAAAAAATTACCTGATACTCTGGAAGAAGGCGAAGCGTGA

Protein

MLGILVGNMLFGHLSDRFGRRTPFLAAVFLQLISGVTTAYSVNWYMFTTLRFILAVATGGTMVTSFVLTMEIIGAKYRETVGIIYQIPFNLGHLSLPLFGYYLRNWSNFQLAISLPSVLFLSYYFLLPESPRWLLTVGKSEEAVKILETAAKRNGLPTDNIGSTTQKMVVDIGNKSEERASFLALFRTPKLRARTIAICYNWFVCGLCFFGVSQYIGQVSGNIFTNVAISGAIQVPGTLISIYANRVLGRKMTLIIANCVTGISCLLIMVVPRSEVSNLILGCSGLWGLSISFATVYLYAGELFPTVVRNSGVGLASTVARIGSMVAPFVATLGHTSAWLPPLAFGIVPLIGAGLCILLPDTRGKKLPDTLEEGEA

Uniprot

H9JNB3   A0A2A4K9Y1   A0A2A4KA95   A0A2H1VGH7   I4DNF7   A0A194PMC3   + More
A0A194QN55   A0A212EW65   A0A1Q3FH65   Q17CS1   D6WKJ0   V5IAH1   A0A1B0C9J9   B0X4Q4   A0A182F7G4   A0A023EUG3   A0A084VXP9   A0A182H4N7   A0A182JCT1   D6WKJ1   A0A182TEQ3   A0A182NFM5   A0A182VI17   A0A182QLT3   Q7QDB3   A0A182HUA7   A0A182WRH0   A0A182Y4D6   A0A182PAB8   A0A182RNN4   A0A182W090   A0A182MBN7   A0A182K794   A0A2M4CTR9   A0A2M4CU13   A0A1B0CZU5   D6X4T8   A0A1Y1KD57   A0A1Y1K9J5   A0A0L7R034   A0A1J1IHN1   A0A1W4WYZ1   A0A1W4X9I8   U4UII8   A0A232EL12   E1ZZY2   K7JAK3   A0A088A3V4   A0A2S2QUM7   N6T164   A0A0T6BBT7   A0A2H8TVD0   A0A158NPS8   A0A154NXF3   A0A151IP62   A0A310SUT5   X1WIK7   A0A0C9R3D9   A0A0C9PLB6   A0A195ATZ5   A0A195ELY0   A0A2H1W3H1   E9IX20   A0A151JT16   A0A2A3ELA5   E2BIH0   A0A2A4K9Y5   A0A151X8L1   K7ITG9   H9JNI6   A0A2J7RBY0   E9J9G6   F4W7G9   W5JIQ9   A0A1B6KGK7   A0A1B6ISQ0   A0A195C6E8   A0A0K8UVC6   A0A026W714   A0A310SN29   A0A088ALA3   A0A154P8V9   A0A0L0BNY8   A0A195DRF1   A0A034WDR5   A0A1B0BL44   E2A1J5   A0A232F564   A0A0A1WZR4   A0A195FCZ0   B4JWE6   Q28YE2   A0A1A9XWD3   B4PAQ3   A0A1A9XWD4   B4MRV4   A0A3B0J2R7   A0A3B0J296   A0A0M3QVP8   A0A195BAL9  

Pubmed

19121390    22651552    26354079    22118469    17510324    18362917    + More
19820115    24945155    24438588    26483478    12364791    14747013    17210077    25244985    28004739    23537049    28648823    20798317    20075255    21347285    21282665    21719571    20920257    23761445    24508170    26108605    25348373    25830018    17994087    15632085    23185243    17550304   

EMBL

BABH01019600    NWSH01000020    PCG80714.1    PCG80713.1    ODYU01002452    SOQ39959.1    + More
AK402884    BAM19447.1    KQ459600    KPI94138.1    KQ461195    KPJ06789.1    AGBW02012077    OWR45719.1    GFDL01008134    JAV26911.1    CH477305    EAT44124.1    KQ971342    EFA04006.1    GALX01001195    JAB67271.1    AJWK01002434    AJWK01002435    AJWK01002436    DS232350    EDS40471.1    GAPW01001011    JAC12587.1    ATLV01018145    KE525215    KFB42743.1    JXUM01109993    KQ565372    KXJ71040.1    EFA04007.2    AXCN02000238    AAAB01008859    EAA07935.5    APCN01000614    AXCM01003853    GGFL01004566    MBW68744.1    GGFL01004591    MBW68769.1    AJVK01009733    KQ971381    EEZ97586.2    GEZM01088532    JAV58130.1    GEZM01088533    JAV58129.1    KQ414672    KOC64208.1    CVRI01000052    CRK99712.1    KB632314    ERL92208.1    NNAY01003667    OXU19035.1    GL435531    EFN73254.1    AAZX01002446    GGMS01012221    MBY81424.1    APGK01048466    KB741110    ENN73834.1    LJIG01002173    KRT84767.1    GFXV01006391    MBW18196.1    ADTU01022726    KQ434769    KZC03774.1    KQ976914    KYN07128.1    KQ760085    OAD61975.1    ABLF02040797    ABLF02040821    ABLF02040843    ABLF02040845    GBYB01006687    GBYB01007297    GBYB01007300    JAG76454.1    JAG77064.1    JAG77067.1    GBYB01001833    JAG71600.1    KQ976745    KYM75454.1    KQ978730    KYN28932.1    ODYU01006026    SOQ47506.1    GL766616    EFZ14896.1    KQ982014    KYN30660.1    KZ288225    PBC31939.1    GL448504    EFN84558.1    PCG80708.1    KQ982409    KYQ56702.1    AAZX01006832    BABH01019597    NEVH01005889    PNF38331.1    GL769313    EFZ10529.1    GL887844    EGI69842.1    ADMH02001371    ETN62775.1    GEBQ01029411    JAT10566.1    GECU01017747    JAS89959.1    KQ978219    KYM96439.1    GDHF01021687    JAI30627.1    KK107372    EZA51773.1    KQ762190    OAD56165.1    KQ434827    KZC07658.1    JRES01001582    KNC21772.1    KQ980581    KYN15387.1    GAKP01006475    JAC52477.1    JXJN01016207    GL435766    EFN72668.1    NNAY01000983    OXU25618.1    GBXI01013722    GBXI01009990    JAD00570.1    JAD04302.1    KQ981673    KYN38256.1    CH916375    EDV98284.1    CM000071    EAL26023.2    KRT02771.1    KRT02772.1    KRT02773.1    KRT02774.1    CM000158    EDW91444.1    KRJ99843.1    CH963850    EDW74843.1    OUUW01000001    SPP75505.1    SPP75504.1    CP012524    ALC42779.1    KQ976540    KYM81265.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000008820    + More
UP000007266    UP000092461    UP000002320    UP000069272    UP000030765    UP000069940    UP000249989    UP000075880    UP000075902    UP000075884    UP000075903    UP000075886    UP000007062    UP000075840    UP000076407    UP000076408    UP000075885    UP000075900    UP000075920    UP000075883    UP000075881    UP000092462    UP000053825    UP000183832    UP000192223    UP000030742    UP000215335    UP000000311    UP000002358    UP000005203    UP000019118    UP000005205    UP000076502    UP000078542    UP000007819    UP000078540    UP000078492    UP000078541    UP000242457    UP000008237    UP000075809    UP000235965    UP000007755    UP000000673    UP000053097    UP000037069    UP000092460    UP000001070    UP000001819    UP000092443    UP000002282    UP000007798    UP000268350    UP000092553   

PRIDE

H9JNB3    H9JNI6   

Pfam

PF00083   Sugar_tr        + More
PF00096   zf-C2H2
PF03022   MRJP
PF12341   Mcl1_mid
PF00400   WD40
PF07690   MFS_1
PF12894   ANAPC4_WD40
PF08969   USP8_dimer

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR017996   Royal_jelly/protein_yellow       
IPR011042   6-blade_b-propeller_TolB-like       
IPR022100   Mcl1_mid       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR011701   MFS       
IPR024977   Apc4_WD40_dom       
IPR015063   USP8_dimer       
IPR011041   Quinoprot_gluc/sorb_DH       

SUPFAM

SSF103473   SSF103473        + More
SSF57667   SSF57667       
SSF50978   SSF50978       
SSF50952   SSF50952       

Gene 3D

2.120.10.30     2.130.10.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JNB3   A0A2A4K9Y1   A0A2A4KA95   A0A2H1VGH7   I4DNF7   A0A194PMC3   + More
A0A194QN55   A0A212EW65   A0A1Q3FH65   Q17CS1   D6WKJ0   V5IAH1   A0A1B0C9J9   B0X4Q4   A0A182F7G4   A0A023EUG3   A0A084VXP9   A0A182H4N7   A0A182JCT1   D6WKJ1   A0A182TEQ3   A0A182NFM5   A0A182VI17   A0A182QLT3   Q7QDB3   A0A182HUA7   A0A182WRH0   A0A182Y4D6   A0A182PAB8   A0A182RNN4   A0A182W090   A0A182MBN7   A0A182K794   A0A2M4CTR9   A0A2M4CU13   A0A1B0CZU5   D6X4T8   A0A1Y1KD57   A0A1Y1K9J5   A0A0L7R034   A0A1J1IHN1   A0A1W4WYZ1   A0A1W4X9I8   U4UII8   A0A232EL12   E1ZZY2   K7JAK3   A0A088A3V4   A0A2S2QUM7   N6T164   A0A0T6BBT7   A0A2H8TVD0   A0A158NPS8   A0A154NXF3   A0A151IP62   A0A310SUT5   X1WIK7   A0A0C9R3D9   A0A0C9PLB6   A0A195ATZ5   A0A195ELY0   A0A2H1W3H1   E9IX20   A0A151JT16   A0A2A3ELA5   E2BIH0   A0A2A4K9Y5   A0A151X8L1   K7ITG9   H9JNI6   A0A2J7RBY0   E9J9G6   F4W7G9   W5JIQ9   A0A1B6KGK7   A0A1B6ISQ0   A0A195C6E8   A0A0K8UVC6   A0A026W714   A0A310SN29   A0A088ALA3   A0A154P8V9   A0A0L0BNY8   A0A195DRF1   A0A034WDR5   A0A1B0BL44   E2A1J5   A0A232F564   A0A0A1WZR4   A0A195FCZ0   B4JWE6   Q28YE2   A0A1A9XWD3   B4PAQ3   A0A1A9XWD4   B4MRV4   A0A3B0J2R7   A0A3B0J296   A0A0M3QVP8   A0A195BAL9  

PDB

4LDS     E-value=1.0376e-15,     Score=203

KEGG

101739567    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0022857   GO:0016021   GO:0003676   GO:0003677   GO:0005215   GO:0055085   GO:0003824   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0016491   GO:0015930  

Length:

376

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

201.28332

Exp number, first 60 AAs:

31.28529

Total prob of N-in:

0.38948

POSSIBLE N-term signal

sequence

inside

1  -  24

TMhelix

25  -  47

outside

48  -  51

TMhelix

52  -  74

inside

75  -  80

TMhelix

81  -  103

outside

104  -  107

TMhelix

108  -  127

inside

128  -  195

TMhelix

196  -  218

outside

219  -  222

TMhelix

223  -  245

inside

246  -  251

TMhelix

252  -  271

outside

272  -  275

TMhelix

276  -  298

inside

299  -  310

TMhelix

311  -  333

outside

334  -  337

TMhelix

338  -  360

inside

361  -  376

 

 

Pi

273.128034

Theta

203.025153

Tajima's D

1.072683

CLR

1.208513

CSRT

0.678666066696665

Interpretation

Uncertain