Gene

KWMTBOMO13701

Pre Gene Modal

BGIBMGA011017

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Amyelois_transitella]

Location

Bomo_Chr23(-):7224618-7227974      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.776

CDS

ATGTCGAATGAAGACGCGATTGAGACAATTATAGGAGCATTCGGGAAATACCAGACCTGGATAGCTATTTTAATAATAATCGGCCGATATCCCGTCGAATATCAGTTGACCAATGTTGTATTTATTATGCCAAGTGTTGAATATATTTGCTTGGACGAAGGTGCAATGAACGCAACGAATTATTGCCCTTGTGAGAATCCTAAATACGATACGAGTACCATTGTAAGCTCAGTGACCACAGAATGGGATTTGATATGCGATAGATCATCTCTTGCATCTTTGGCGCAATCTATGATGCAAATTGGTATTGTGCCCGGAAGCGTGATCTTTGGACACATTTCTGACCGGTATGGCCGTAAAATAGCATCAATACTATCTTTATTCTTTCAAGTAGTAATAGTTGCCATATCGGCTGTAGTCCCTGAGTATTGGATGTTTCTCGTTTGCCGATTTGCTATTGGAATAACTGTTGGCGGAACAATGCTATGTACCTACGTCCTAAAAGTTGAATTAAGTGGGAAATCTTTTAGGCCATATCTAGTGGGTCTAGCAGAAGTTGCCTTCGTTACCGGATACATGACACTTCCAATAATAGCATACTTTGTTAGAGAATGGAGAACCTTGCAACTCGTAACTTCTCTTCCTTGGCTCTTTATTGGATTCTACTACTGGTTAATTCCAGAATCGCCACGATGGCTTATATCGGTTGGCAAAAAACAAGAAGCAATCAAAGTACTAGCCTACATCGCTAAAAAAAATAATCGACCTACAGATAACATAGAATCCATTATTGATAAAATCGAGGACGAAAAACCTGGATCAATGATGGATCTTTTCAGAACACCAAAAATAAGAGTCTACACTGTAATAGCGGCAATAGTTTGGATGCTCATCGTGCCTAATACCAGCGACTATTTTGGTTGTTGTCGCTACTCTATACTTCAGAAGAAAAATAAGCATTGTGACCAATTTTACCCTAGTTGCACTATCATTGATTGTGATTATATTTATACCGGGTGA

Protein

MSNEDAIETIIGAFGKYQTWIAILIIIGRYPVEYQLTNVVFIMPSVEYICLDEGAMNATNYCPCENPKYDTSTIVSSVTTEWDLICDRSSLASLAQSMMQIGIVPGSVIFGHISDRYGRKIASILSLFFQVVIVAISAVVPEYWMFLVCRFAIGITVGGTMLCTYVLKVELSGKSFRPYLVGLAEVAFVTGYMTLPIIAYFVREWRTLQLVTSLPWLFIGFYYWLIPESPRWLISVGKKQEAIKVLAYIAKKNNRPTDNIESIIDKIEDEKPGSMMDLFRTPKIRVYTVIAAIVWMLIVPNTSDYFGCCRYSILQKKNKHCDQFYPSCTIIDCDYIYTG

Uniprot

H9JNB4   A0A194PLD3   A0A194QTC0   A0A2A4KAN0   A0A194QMP3   A0A2H1X2W5   + More
A0A194QMN1   A0A194PSN4   A0A212FFR3   A0A0L7KWA3   A0A2H1W3H1   A0A2A4K9Y5   A0A212FFR4   A0A194PL20   A0A2H1VGH7   D6X4T8   V5IAH1   A0A194QN55   I4DNF7   A0A194PMC3   A0A1B0C9J9   D6WKJ0   A0A2A4KA95   A0A2A4K9Y1   H9JNB3   D6WKJ1   A0A2H8TVD0   X1WIK7   H9JNI6   U4UII8   N6T164   A0A2S2QUM7   A0A182T1C6   A0A182TEQ3   Q7QDB3   A0A182HUA7   A0A182WRH0   A0A194QTC5   A0A1J1IHN1   A0A182Y4D6   A0A182VI17   A0A0A9YW78   A0A0K8SX32   K7ITG9   A0A2M4CTR9   A0A2M4CU13   A0A182W090   A0A1B6DL75   Q17CS1   A0A182NFM5   A0A182PAB8   A0A182QLT3   A0A182JCT1   A0A182F7G4   A0A182K794   A0A182MBN7   A0A182RNN4   A0A1Y1KD57   A0A224XMK6   A0A023EUG3   A0A0P4VU55   A0A182H4N7   A0A1Y1K9J5   E2BIH0   B4HPT1   A0A069DVC5   A0A1W4WYZ1   A0A1W4X9I8   B4QEI8   Q7K3M6   A0A232F564   B3NK59   A0A182LFQ8   A0A3B0J296   A0A3B0J2R7   B4KS11   Q28YE2   B4MRV4   A0A0L7L5U3   A0A3S2LHN8   B3MH68   A0A2J7RBY0   T1HMK8   B4JWE6   B4PAQ3   A0A1Q3FH65   A0A084VXP9   A0A194PLC9   A0A0M3QVP8   A0A0T6BBT7   A0A212FFS4   B0X4Q4   B4GD88   A0A0M9A4G4   A0A0K8UVC6   E2A1J5   A0A1W4VGV5  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
22651552    23537049    12364791    14747013    17210077    25244985    25401762    20075255    17510324    28004739    24945155    27129103    26483478    20798317    17994087    26334808    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    20966253    15632085    23185243    17550304    24438588   

EMBL

BABH01019600    KQ459600    KPI94137.1    KQ461195    KPJ06791.1    NWSH01000020    + More
PCG80712.1    KPJ06792.1    ODYU01013012    SOQ59617.1    KPJ06793.1    KPI94135.1    AGBW02008774    OWR52574.1    JTDY01005148    KOB67324.1    ODYU01006026    SOQ47506.1    PCG80708.1    OWR52572.1    KPI94131.1    ODYU01002452    SOQ39959.1    KQ971381    EEZ97586.2    GALX01001195    JAB67271.1    KPJ06789.1    AK402884    BAM19447.1    KPI94138.1    AJWK01002434    AJWK01002435    AJWK01002436    KQ971342    EFA04006.1    PCG80713.1    PCG80714.1    EFA04007.2    GFXV01006391    MBW18196.1    ABLF02040797    ABLF02040821    ABLF02040843    ABLF02040845    BABH01019597    KB632314    ERL92208.1    APGK01048466    KB741110    ENN73834.1    GGMS01012221    MBY81424.1    AAAB01008859    EAA07935.5    APCN01000614    KPJ06796.1    CVRI01000052    CRK99712.1    GBHO01009789    JAG33815.1    GBRD01008105    JAG57716.1    AAZX01006832    GGFL01004566    MBW68744.1    GGFL01004591    MBW68769.1    GEDC01010881    JAS26417.1    CH477305    EAT44124.1    AXCN02000238    AXCM01003853    GEZM01088532    JAV58130.1    GFTR01006756    JAW09670.1    GAPW01001011    JAC12587.1    GDKW01002245    JAI54350.1    JXUM01109993    KQ565372    KXJ71040.1    GEZM01088533    JAV58129.1    GL448504    EFN84558.1    CH480816    EDW48649.1    GBGD01001232    JAC87657.1    CM000362    CM002911    EDX07862.1    KMY95206.1    AE013599    AY058478    BT120184    AAF57511.1    AAL13707.1    ADB91432.1    NNAY01000983    OXU25618.1    CH954179    EDV55264.1    OUUW01000001    SPP75504.1    SPP75505.1    CH933808    EDW10447.1    CM000071    EAL26023.2    KRT02771.1    KRT02772.1    KRT02773.1    KRT02774.1    CH963850    EDW74843.1    JTDY01002812    KOB70676.1    RSAL01000008    RVE54031.1    CH902619    EDV36845.1    NEVH01005889    PNF38331.1    ACPB03001263    CH916375    EDV98284.1    CM000158    EDW91444.1    KRJ99843.1    GFDL01008134    JAV26911.1    ATLV01018145    KE525215    KFB42743.1    KPI94132.1    CP012524    ALC42779.1    LJIG01002173    KRT84767.1    OWR52573.1    DS232350    EDS40471.1    CH479181    EDW32583.1    KQ435759    KOX75743.1    GDHF01021687    JAI30627.1    GL435766    EFN72668.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000037510    + More
UP000007266    UP000092461    UP000007819    UP000030742    UP000019118    UP000075901    UP000075902    UP000007062    UP000075840    UP000076407    UP000183832    UP000076408    UP000075903    UP000002358    UP000075920    UP000008820    UP000075884    UP000075885    UP000075886    UP000075880    UP000069272    UP000075881    UP000075883    UP000075900    UP000069940    UP000249989    UP000008237    UP000001292    UP000192223    UP000000304    UP000000803    UP000215335    UP000008711    UP000075882    UP000268350    UP000009192    UP000001819    UP000007798    UP000283053    UP000007801    UP000235965    UP000015103    UP000001070    UP000002282    UP000030765    UP000092553    UP000002320    UP000008744    UP000053105    UP000000311    UP000192221   

PRIDE

H9JNB4    H9JNB3    H9JNI6    Q7K3M6   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF12894   ANAPC4_WD40
PF12341   Mcl1_mid
PF01553   Acyltransferase
PF16076   Acyltransf_C
PF00400   WD40

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       
IPR022100   Mcl1_mid       
IPR036322   WD40_repeat_dom_sf       
IPR011041   Quinoprot_gluc/sorb_DH       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR032098   Acyltransf_C       
IPR002123   Plipid/glycerol_acylTrfase       

SUPFAM

SSF103473   SSF103473        + More
SSF50978   SSF50978       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JNB4   A0A194PLD3   A0A194QTC0   A0A2A4KAN0   A0A194QMP3   A0A2H1X2W5   + More
A0A194QMN1   A0A194PSN4   A0A212FFR3   A0A0L7KWA3   A0A2H1W3H1   A0A2A4K9Y5   A0A212FFR4   A0A194PL20   A0A2H1VGH7   D6X4T8   V5IAH1   A0A194QN55   I4DNF7   A0A194PMC3   A0A1B0C9J9   D6WKJ0   A0A2A4KA95   A0A2A4K9Y1   H9JNB3   D6WKJ1   A0A2H8TVD0   X1WIK7   H9JNI6   U4UII8   N6T164   A0A2S2QUM7   A0A182T1C6   A0A182TEQ3   Q7QDB3   A0A182HUA7   A0A182WRH0   A0A194QTC5   A0A1J1IHN1   A0A182Y4D6   A0A182VI17   A0A0A9YW78   A0A0K8SX32   K7ITG9   A0A2M4CTR9   A0A2M4CU13   A0A182W090   A0A1B6DL75   Q17CS1   A0A182NFM5   A0A182PAB8   A0A182QLT3   A0A182JCT1   A0A182F7G4   A0A182K794   A0A182MBN7   A0A182RNN4   A0A1Y1KD57   A0A224XMK6   A0A023EUG3   A0A0P4VU55   A0A182H4N7   A0A1Y1K9J5   E2BIH0   B4HPT1   A0A069DVC5   A0A1W4WYZ1   A0A1W4X9I8   B4QEI8   Q7K3M6   A0A232F564   B3NK59   A0A182LFQ8   A0A3B0J296   A0A3B0J2R7   B4KS11   Q28YE2   B4MRV4   A0A0L7L5U3   A0A3S2LHN8   B3MH68   A0A2J7RBY0   T1HMK8   B4JWE6   B4PAQ3   A0A1Q3FH65   A0A084VXP9   A0A194PLC9   A0A0M3QVP8   A0A0T6BBT7   A0A212FFS4   B0X4Q4   B4GD88   A0A0M9A4G4   A0A0K8UVC6   E2A1J5   A0A1W4VGV5  

PDB

6N3I     E-value=4.09803e-09,     Score=146

KEGG

101745356    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0055085   GO:0003824   GO:0016746   GO:0005215   GO:0003677   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

Length:

339

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

133.52311

Exp number, first 60 AAs:

20.54003

Total prob of N-in:

0.37059

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  88

TMhelix

89  -  111

outside

112  -  120

TMhelix

121  -  140

inside

141  -  146

TMhelix

147  -  169

outside

170  -  178

TMhelix

179  -  201

inside

202  -  207

TMhelix

208  -  226

outside

227  -  285

TMhelix

286  -  308

inside

309  -  339

 

 

Pi

225.391547

Theta

180.061062

Tajima's D

0.307793

CLR

0

CSRT

0.459727013649318

Interpretation

Uncertain