Gene

KWMTBOMO13700

Pre Gene Modal

BGIBMGA011018

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Amyelois_transitella]

Location

Bomo_Chr23(-):7220404-7222304      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.835

CDS

ATGCAAATCGGTATTATACCCGGAAGCGTGATCTTCGGATACATGTCTGATCGGCATGGCCGTAAAATAGCATCGTTACTATCACTGTTTTGTCAAGTACTAGCAGTGGCCATATCCGCTATAGTAACCGAGTATTGGATGTTTGTCGTCTGCCGTTTTGTTATTGGAATTACCGTTGGAGGCACAATAATATGTACCTACGTATTGATAGTTGAATTAAGTGGGAAATCTTTTAGGCCTTACCTAGTGGGCCTATCAGAAGTTTCCTACGTCACTGGATACATGACACTTCCGATAATAGCCTATTTTATTAGAGACTGGAGGACCCTGCAGCTTGTAACTTCACTTCCTTGGTTATTTGTCGGTTTTTACTATTGGTTAATTCCAGAGTCACCACGATGGCTCATATCAGTTGGTAGAAAAAATGAAGCTATAAAAATACTCACTTACATTGCCAAAAAAAATAAGAGGCCTACGAACAATATCGCAACCATAGTCGACAATGTAGAAAACGAAAAGCCTGGATCAGTAATCGATTTGTTTAAAACATCTAAAATCAGAATTCTAGCCGTCTGTGCAGCTATATTGTGCTGTTTTCTTCCCGAAACAAAAGGGATTGTTTTAAAGAACACAATTCAAGAGACAGAACAATGTCATGCCAGAAAGAAATCTGACCATGCCGAGAAAACTGCAGATAATACATGTATCTAA

Protein

MQIGIIPGSVIFGYMSDRHGRKIASLLSLFCQVLAVAISAIVTEYWMFVVCRFVIGITVGGTIICTYVLIVELSGKSFRPYLVGLSEVSYVTGYMTLPIIAYFIRDWRTLQLVTSLPWLFVGFYYWLIPESPRWLISVGRKNEAIKILTYIAKKNKRPTNNIATIVDNVENEKPGSVIDLFKTSKIRILAVCAAILCCFLPETKGIVLKNTIQETEQCHARKKSDHAEKTADNTCI

Uniprot

H9JNB4   A0A194PLD3   A0A194QMP3   A0A194QTC0   A0A2A4KAN0   A0A2H1X2W5   + More
A0A212FFR3   A0A194PSN4   A0A194QMN1   A0A194PL23   A0A2H1VGH7   A0A212EW65   A0A1B0C9J9   A0A1B0CZU5   A0A0L7KWA3   A0A1J1IHN1   D6X4T8   A0A2A4KA95   A0A2A4K9Y1   A0A194QN55   I4DNF7   A0A194PMC3   A0A2H1W3H1   D6WKJ0   A0A2A4K9Y5   H9JNB3   H9JNI6   V5IAH1   A0A212FFR4   A0A224XMK6   A0A069DVC5   D6WKJ1   N6T164   U4UII8   K7ITG9   B4PAQ3   A0A3Q3WYI7   A0A3Q3X5Q2   A0A2H8TVD0   A0A0P4VU55   A0A0T6BBT7   B3NK59   A0A3P9ICK5   A0A2M4CTR9   A0A2M4CU13   T1HMK8   A0A182F7G4   A0A3B3HXJ1   A0A3B3DZL8   A0A3B4Z965   A0A3B4TH63   A0A182VI17   A0A2A4KAA8   A0A3B4E9D7   A0A3Q3EKU8   A0A2A4K5L0   A0A2G8KDS1   A0A182LFQ8   A0A182WRH0   Q7QDB3   A0A182HUA7   A0A2J7RBY0   A0A3Q3GDL9   A0A2W1BFH6   A0A182TEQ3   A0A3P8SY82   A0A3Q1C996   A0A3P8SZ29   A0A232F564   A0A3P8SXH0   X1WIK7   A0A3Q1JNX7   A0A1D2NMQ1   A0A2S2QUM7   M3ZTN2   A0A3B5MYT5   Q7K3M6   A0A1A8V9Y1   A0A3B3WKB3   A0A3Q1F9F1   A0A182PAB8   B4JWE6   A0A1A7Z2L6   A0A0K8SX32   A0A182T1C6   A0A146UWB8   B4HPT1   A0A3B4TI92   A0A3P9PY22   A0A146UV62   A0A087X999   A0A1A7YLX5   A0A1A8AN34   A0A3P9PY45   A0A1A8J6Y9   A0A3B3VDP2   A0A0A9YW78   A0A1A7XEF8   A0A2U9CWV1   A0A3Q2P714  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
22651552    26334808    23537049    20075255    17994087    17550304    27129103    17554307    29451363    29023486    20966253    12364791    14747013    17210077    28756777    28648823    27289101    23542700    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25401762   

EMBL

BABH01019600    KQ459600    KPI94137.1    KQ461195    KPJ06792.1    KPJ06791.1    + More
NWSH01000020    PCG80712.1    ODYU01013012    SOQ59617.1    AGBW02008774    OWR52574.1    KPI94135.1    KPJ06793.1    KPI94136.1    ODYU01002452    SOQ39959.1    AGBW02012077    OWR45719.1    AJWK01002434    AJWK01002435    AJWK01002436    AJVK01009733    JTDY01005148    KOB67324.1    CVRI01000052    CRK99712.1    KQ971381    EEZ97586.2    PCG80713.1    PCG80714.1    KPJ06789.1    AK402884    BAM19447.1    KPI94138.1    ODYU01006026    SOQ47506.1    KQ971342    EFA04006.1    PCG80708.1    BABH01019597    GALX01001195    JAB67271.1    OWR52572.1    GFTR01006756    JAW09670.1    GBGD01001232    JAC87657.1    EFA04007.2    APGK01048466    KB741110    ENN73834.1    KB632314    ERL92208.1    AAZX01006832    CM000158    EDW91444.1    KRJ99843.1    GFXV01006391    MBW18196.1    GDKW01002245    JAI54350.1    LJIG01002173    KRT84767.1    CH954179    EDV55264.1    GGFL01004566    MBW68744.1    GGFL01004591    MBW68769.1    ACPB03001263    NWSH01000010    PCG80916.1    NWSH01000158    PCG78950.1    MRZV01000662    PIK46158.1    AAAB01008859    EAA07935.5    APCN01000614    NEVH01005889    PNF38331.1    KZ150304    PZC71520.1    NNAY01000983    OXU25618.1    ABLF02040797    ABLF02040821    ABLF02040843    ABLF02040845    LJIJ01000009    ODN06216.1    GGMS01012221    MBY81424.1    AE013599    AY058478    BT120184    AAF57511.1    AAL13707.1    ADB91432.1    HAEJ01016184    SBS56641.1    CH916375    EDV98284.1    HADX01014860    SBP37092.1    GBRD01008105    JAG57716.1    GCES01077224    JAR09099.1    CH480816    EDW48649.1    GCES01077223    JAR09100.1    AYCK01015209    HADW01020767    HADX01008917    SBP31149.1    HADY01017944    SBP56429.1    HAED01019000    SBR05445.1    GBHO01009789    JAG33815.1    HADW01014835    SBP16235.1    CP026262    AWP20379.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000092461    + More
UP000092462    UP000037510    UP000183832    UP000007266    UP000019118    UP000030742    UP000002358    UP000002282    UP000261620    UP000008711    UP000265200    UP000015103    UP000069272    UP000001038    UP000261560    UP000261400    UP000261420    UP000075903    UP000261440    UP000264800    UP000230750    UP000075882    UP000076407    UP000007062    UP000075840    UP000235965    UP000261660    UP000075902    UP000265080    UP000257160    UP000215335    UP000007819    UP000265040    UP000094527    UP000002852    UP000261380    UP000000803    UP000261480    UP000257200    UP000075885    UP000001070    UP000075901    UP000001292    UP000242638    UP000028760    UP000261500    UP000246464    UP000265000   

PRIDE

H9JNB4    H9JNB3    H9JNI6    Q7K3M6   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF12894   ANAPC4_WD40
PF12341   Mcl1_mid

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       
IPR004749   Orgcat_transp/SVOP       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       
IPR022100   Mcl1_mid       
IPR036322   WD40_repeat_dom_sf       
IPR011041   Quinoprot_gluc/sorb_DH       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       

SUPFAM

SSF103473   SSF103473        + More
SSF50978   SSF50978       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JNB4   A0A194PLD3   A0A194QMP3   A0A194QTC0   A0A2A4KAN0   A0A2H1X2W5   + More
A0A212FFR3   A0A194PSN4   A0A194QMN1   A0A194PL23   A0A2H1VGH7   A0A212EW65   A0A1B0C9J9   A0A1B0CZU5   A0A0L7KWA3   A0A1J1IHN1   D6X4T8   A0A2A4KA95   A0A2A4K9Y1   A0A194QN55   I4DNF7   A0A194PMC3   A0A2H1W3H1   D6WKJ0   A0A2A4K9Y5   H9JNB3   H9JNI6   V5IAH1   A0A212FFR4   A0A224XMK6   A0A069DVC5   D6WKJ1   N6T164   U4UII8   K7ITG9   B4PAQ3   A0A3Q3WYI7   A0A3Q3X5Q2   A0A2H8TVD0   A0A0P4VU55   A0A0T6BBT7   B3NK59   A0A3P9ICK5   A0A2M4CTR9   A0A2M4CU13   T1HMK8   A0A182F7G4   A0A3B3HXJ1   A0A3B3DZL8   A0A3B4Z965   A0A3B4TH63   A0A182VI17   A0A2A4KAA8   A0A3B4E9D7   A0A3Q3EKU8   A0A2A4K5L0   A0A2G8KDS1   A0A182LFQ8   A0A182WRH0   Q7QDB3   A0A182HUA7   A0A2J7RBY0   A0A3Q3GDL9   A0A2W1BFH6   A0A182TEQ3   A0A3P8SY82   A0A3Q1C996   A0A3P8SZ29   A0A232F564   A0A3P8SXH0   X1WIK7   A0A3Q1JNX7   A0A1D2NMQ1   A0A2S2QUM7   M3ZTN2   A0A3B5MYT5   Q7K3M6   A0A1A8V9Y1   A0A3B3WKB3   A0A3Q1F9F1   A0A182PAB8   B4JWE6   A0A1A7Z2L6   A0A0K8SX32   A0A182T1C6   A0A146UWB8   B4HPT1   A0A3B4TI92   A0A3P9PY22   A0A146UV62   A0A087X999   A0A1A7YLX5   A0A1A8AN34   A0A3P9PY45   A0A1A8J6Y9   A0A3B3VDP2   A0A0A9YW78   A0A1A7XEF8   A0A2U9CWV1   A0A3Q2P714  

PDB

4QIQ     E-value=2.06689e-06,     Score=120

KEGG

101745356    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0055085   GO:0003824   GO:0005215   GO:0005515   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

Length:

236

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

95.6564100000001

Exp number, first 60 AAs:

32.27989

Total prob of N-in:

0.17781

POSSIBLE N-term signal

sequence

outside

1  -  22

TMhelix

23  -  42

inside

43  -  48

TMhelix

49  -  71

outside

72  -  80

TMhelix

81  -  103

inside

104  -  109

TMhelix

110  -  128

outside

129  -  185

TMhelix

186  -  208

inside

209  -  236

 

 

Pi

238.331725

Theta

215.209423

Tajima's D

0.21398

CLR

0.417313

CSRT

0.43602819859007

Interpretation

Uncertain