Gene

KWMTBOMO13696  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011019

Annotation

endothelial-monocyte_activating_polypeptide_II_[Bombyx_mori]

Location

Bomo_Chr23(-):7186071-7187304      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.835 Mitochondrial   Reliability : 1.221 Nuclear   Reliability : 1.541

CDS

ATGTTAAAATTGTCATTTGTATTGCGTAGAAATATGTCTCAGTCAGTTACGAAACTTATAAATAATGCAGATATAGCTGAAAAAAGGCTAGCCGAATTACGTAAAAAGCTGGAAGAGGTGAAAAAGTTTAAAATAGAAGAAAAGATCAAACAGCTAATACAAGAAAATAATACTTTGTCGGCGAAGGTAAACGCTGCGAAGGCAGAGTTAATAGGTTTGGAAATATCACACGGAAAGAGGCAGTATGCGATACCTGGTAAAACAGACCTGCTGGAAACAACCAAGATTGTTACAACTATTCAAGATTCCGTTTGTAATGAAAAACCAATTATCGATAAAAAGGAGAAGAAAGTCAAAGATTCTAACAAAAAACCCAAAGATAAACCTAGTGAATCGGCTGATATAGCAGTAGATGTAAGGAAACTAGATTTTCGGATTGGAAAAATTGTTGAGATTAGTAAACACCCTGATGCTGATTCTTTGTATGTGGAAAAAATAGACTGTGGTGAAGAAAATCCACGTACTGTTGTGTCTGGTTTAGTAAATCATGTTCCAATAGATGAAATGCGAGAAAGAATAGTTATGGTACTCTGCAACTTGAAACCAGTTAAGATGAGAGGTGTAACATCTGAAGCCATGGTAATGTGTGCATCATCTGCTGAAAAAGTTGAAGTTTTAATACCTCCACCTGATGCTATACCAGGGGATTTGGTTGTATGTGAAGGATATCCTAGAGAGCCTGAAGCTGTGCTTAATCCCAAAAAGAAAATATTTGAGACTTGTGCACCTGATTTAAAAACAAATAATGAAAAGATAGCCTGTTATAAGGGTAATCCAATAATTGTACCAGGAAAAGGTCCAATAATTGCACCAACTTTAATCAATGTTAATGTAAAATAA

Protein

MLKLSFVLRRNMSQSVTKLINNADIAEKRLAELRKKLEEVKKFKIEEKIKQLIQENNTLSAKVNAAKAELIGLEISHGKRQYAIPGKTDLLETTKIVTTIQDSVCNEKPIIDKKEKKVKDSNKKPKDKPSESADIAVDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLNPKKKIFETCAPDLKTNNEKIACYKGNPIIVPGKGPIIAPTLINVNVK

Uniprot

Q2F6A4   H9JNB6   A0A2H1VUF5   A0A212ES89   A0A194PN20   A0A2A4K9R2   + More
A0A1A9UVK1   W8BNV6   A0A0L0C682   A0A034W1W8   A0A0C9QIA5   A0A1B0G734   B4HSB8   D3TLH2   T1PEE1   A0A0J9R9L7   A0A1I8NBA8   A0A1J1HNL1   B3MIA5   B4MIX3   A0A0K8UZN4   A0A1L8DGA3   A1Z7K8   A0A1L8DGD8   A0A0M3QUG6   B0WG59   A0A0R1DMF2   A0A1I8P7P6   B3N840   A0A1W4UXP6   B4KTP9   B4LNP3   A0A1B0DPQ9   Q28Y85   B4GCU9   A0A0R3NU26   B4JVF4   A0A336MH26   A0A3B0JRY8   A0A1B0CJY7   A0A3B0J051   A0A336LVI7   T1GBR2   A0A1Q3F719   A0A0K8TLD8   Q16SR4   Q17AI3   Q7Q8S7   B4NSB8   U5EGV7   U4UMB6   A0A182MMP8   A0A182YA42   J3JVT2   A0A182WCU9   A0A0T6AUI3   D7EJV9   A0A182K4Y2   A0A139W9X2  

Pubmed

19121390    22118469    26354079    24495485    26108605    25348373    + More
17994087    20353571    22936249    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15632085    26369729    17510324    12364791    23537049    25244985    22516182    18362917    19820115   

EMBL

DQ311168    ABD36113.1    BABH01019596    ODYU01004489    SOQ44418.1    AGBW02012844    + More
OWR44355.1    KQ459600    KPI94129.1    NWSH01000020    PCG80706.1    GAMC01003740    JAC02816.1    JRES01000848    KNC27766.1    GAKP01011210    GAKP01011206    GAKP01011204    JAC47748.1    GBYB01014478    JAG84245.1    CCAG010003770    CH480816    EDW47013.1    EZ422274    ADD18550.1    KA646313    AFP60942.1    CM002911    KMY92379.1    CVRI01000010    CRK88980.1    CH902619    EDV35950.2    CH963719    EDW72062.2    GDHF01020296    JAI32018.1    GFDF01008601    JAV05483.1    AE013599    AAF59019.2    GFDF01008556    JAV05528.1    CP012524    ALC40633.1    DS231923    EDS26755.1    CM000157    KRJ98428.1    CH954177    EDV59453.1    CH933808    EDW09632.2    CH940648    EDW60113.2    AJVK01001581    CM000071    EAL26080.2    CH479181    EDW32512.1    KRT02815.1    CH916375    EDV98422.1    UFQT01001192    SSX29415.1    OUUW01000001    SPP73878.1    AJWK01015538    SPP73877.1    UFQT01000226    SSX22056.1    CAQQ02198381    GFDL01011685    JAV23360.1    GDAI01002436    JAI15167.1    CH477668    EAT37505.1    CH477335    EAT43239.1    AAAB01008933    EAA09959.4    CH982072    EDX15496.1    GANO01003286    JAB56585.1    KB632275    ERL91150.1    AXCM01000498    BT127350    AEE62312.1    LJIG01022785    KRT78728.1    DS497720    EFA12886.1    KQ971866    KYB24711.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000218220    UP000078200    UP000037069    + More
UP000092444    UP000001292    UP000095301    UP000183832    UP000007801    UP000007798    UP000000803    UP000092553    UP000002320    UP000002282    UP000095300    UP000008711    UP000192221    UP000009192    UP000008792    UP000092462    UP000001819    UP000008744    UP000001070    UP000268350    UP000092461    UP000015102    UP000008820    UP000007062    UP000000304    UP000030742    UP000075883    UP000076408    UP000075920    UP000007266    UP000075881   

PRIDE

Q2F6A4    H9JNB6    A1Z7K8   

Pfam

PF01588   tRNA_bind

Interpro

IPR002547   tRNA-bd_dom        + More
IPR012340   NA-bd_OB-fold       

SUPFAM

SSF50249   SSF50249       

ProteinModelPortal

Q2F6A4   H9JNB6   A0A2H1VUF5   A0A212ES89   A0A194PN20   A0A2A4K9R2   + More
A0A1A9UVK1   W8BNV6   A0A0L0C682   A0A034W1W8   A0A0C9QIA5   A0A1B0G734   B4HSB8   D3TLH2   T1PEE1   A0A0J9R9L7   A0A1I8NBA8   A0A1J1HNL1   B3MIA5   B4MIX3   A0A0K8UZN4   A0A1L8DGA3   A1Z7K8   A0A1L8DGD8   A0A0M3QUG6   B0WG59   A0A0R1DMF2   A0A1I8P7P6   B3N840   A0A1W4UXP6   B4KTP9   B4LNP3   A0A1B0DPQ9   Q28Y85   B4GCU9   A0A0R3NU26   B4JVF4   A0A336MH26   A0A3B0JRY8   A0A1B0CJY7   A0A3B0J051   A0A336LVI7   T1GBR2   A0A1Q3F719   A0A0K8TLD8   Q16SR4   Q17AI3   Q7Q8S7   B4NSB8   U5EGV7   U4UMB6   A0A182MMP8   A0A182YA42   J3JVT2   A0A182WCU9   A0A0T6AUI3   D7EJV9   A0A182K4Y2   A0A139W9X2  

PDB

4R3Z     E-value=1.61207e-49,     Score=494

KEGG

692809    K15437 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 | (RefSeq) endothelial-

GO

GO:0000049   GO:0017101   GO:0006418   GO:0005524   GO:0006468   GO:0004672   GO:0000287   GO:0016620   GO:0016787   GO:0003676   GO:0016491   GO:0015930  

Length:

299

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01948

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01381

outside

1  -  299

 

 

Pi

200.787256

Theta

200.111472

Tajima's D

0.019746

CLR

0.552457

CSRT

0.370331483425829

Interpretation

Uncertain