Gene

KWMTBOMO13678

Annotation

THAP_domain-containing_protein_9?_partial_[Camponotus_floridanus]

Location

Bomo_Chr23(+):5978936-5980843      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.3 Nuclear   Reliability : 1.706

CDS

ATGCAAATCAGAAGGCTTCAAAAGAAAACCAGCCGTTATCAGAAAAAAATTGCTAATTTAAAGGACATTTTGAAAAACCTTAATGAAAAAAACTTCATTAGTGCTGATCACGTTACGCAATTAGAAAACATTGGAGTAACCGACCTTATCCAGCGTTATGAAAGAAATGTTTCATCGGGTCAAAGTACTAACCAGAAATATCCGCCTGCTTTAAGAATTTTTGCCACTACTCTTCACTTTTATTCGCCAAAGGCGTACGCGTATGTAAGAAAAAAATTCCAAACAGCTTTGCCTCATATTCGAACCATAAAAAAGTGGTACCAATCTATCGATGCTCAGCCTGGATTCACGCAAGAATCATTAAAAGCGATAAAACTTAAAACTGCCTGCACTAAACACAAATTGTTGTGTAATTTAGTTTTAGATGAAATGGCAATCAGACAGCATGTAGAGTGGGATGGAAAACAAATGCACGGGTATGTTGATATTTCTAATTCTGCAGAACAAGGGGATTGTTTACCCGAAGCCAAAGAAGTTCTTGTATTTTTAGTTACCGCAATTAATGGGGCTTGGAAAATACCAGTCGGGTATTTTCTCATTGACGGTGTCACAGGAGAACAACGGTCTAATCTTGTCAGACAATGTTTGGAATTATTAGAAGATACAGGTATTCAAGTTACCTCGATGACTTTTGACGGCTGTCCAGCCAATATCACCATGGCTAAGAAACTCGGATGTTCTTTTGAAGTTGAAAACTTAAAATCATATTTTGAGCACCCCGTTACTCGTCAACCTGTACATATTTTTCTCGATCCATGCCACATGCTGAAGCTATTGAGAAATGCTTTTGAATCATATGGATGTTTCATGGATGCTTCAAATAGGTGTATAAAATGGAGTCATCTAAAAAATCTGTATGACATTCAGGATAAAGAAAAACTGCACTTAGCAAATAAATTACGAAAAAGTCATATCTTTTTCAAGAACCAAAAAATGAAAGTTCGCTTAGCTTCGCAATTATTTAGCAACAGTGTTGCAGATGCCCTGAATTTTTGTTGTGAACTTCAAATCGCTGGTTTTGATGATGTAGAAGGCACTGTGGAATATCTAAAAACTATCAACAACTTGTTCGATGTGTTAAATTCAAGGCATATGGCCCAACTCCATTATAAAAAACCAGTTTGCCCAGGCAACAAAGACAAGGTATTTGAAACTTTAGAAAAGGCGAAACGGTGTCTAACATCTATAAAGCTTTCAGATGGTACAAAAGCTATCATTACACCCAGAAAAACCGGTTTTATTGGTTTATTAGTGTGCATAGAAAGCCTCAAGGCCTTGTATATACAACTAATTGAAAAGGACCAAAAACTTAAGTACATTCCGGCTTACAAAATCAGCCAAGATCATTTAGAGCTTATGTTTGGACATATACGGTCACATGGTGGATGCAGCACCAACCCAACGGCGCGACAGTTTCAAGCAATATATAAAAAGCTCTTGGTAAAGTCGGAGCTTAGAGATGTAGACCAGGGAAACTGTATAGCTCTTGAGGAGGTTTCTTTTTTGTCGTGCTCTTCAGCTGTCCAAAATATAAATCTGACAATCTAA

Protein

MQIRRLQKKTSRYQKKIANLKDILKNLNEKNFISADHVTQLENIGVTDLIQRYERNVSSGQSTNQKYPPALRIFATTLHFYSPKAYAYVRKKFQTALPHIRTIKKWYQSIDAQPGFTQESLKAIKLKTACTKHKLLCNLVLDEMAIRQHVEWDGKQMHGYVDISNSAEQGDCLPEAKEVLVFLVTAINGAWKIPVGYFLIDGVTGEQRSNLVRQCLELLEDTGIQVTSMTFDGCPANITMAKKLGCSFEVENLKSYFEHPVTRQPVHIFLDPCHMLKLLRNAFESYGCFMDASNRCIKWSHLKNLYDIQDKEKLHLANKLRKSHIFFKNQKMKVRLASQLFSNSVADALNFCCELQIAGFDDVEGTVEYLKTINNLFDVLNSRHMAQLHYKKPVCPGNKDKVFETLEKAKRCLTSIKLSDGTKAIITPRKTGFIGLLVCIESLKALYIQLIEKDQKLKYIPAYKISQDHLELMFGHIRSHGGCSTNPTARQFQAIYKKLLVKSELRDVDQGNCIALEEVSFLSCSSAVQNINLTI

Uniprot

A0A2H1VM77   A0A1Y1JYF3   A0A1Y1JVC6   A0A1Y1K320   E2AQS3   A0A1Y1KU95   + More
J9KAE9   A0A2R5L6W6   X1X489   X1X5Z2   J9JZH0   A0A1Y1MGQ7   A0A1Y1MGQ8   A0A151IJM3   A0A151IJP2   A0A2A4JUC7   J9M688   A0A3S2PFD8   J9LNJ4   A0A2S2PE11   A0A151WXA5   A0A2S2NIL6   A0A2S2PNR3   J9KWL5   A0A2A4JJZ8   J9KRW2   J9LRN9   J9JRC6   J9L444   A0A1E1XEX7   J9K966   A0A026VY20   A0A146NQI8   A0A1A8B8M0   A0A1A8U049   I3JY54   J9JUB1   J9LWE0   A0A151J7W4   T2M5L7   J9LWZ8   J9K2S6   A0A1A8CVN9   J9LL83   J9LZ19   A0A151J4W4   A0A2S2PEK2   J9LVQ5   A0A1Y1LE13   A0A1A8D9U5   J9KY26   J9JTA4   J9JS62   X1X8L8   J9KRT1   A0A151IXW5   A0A151IM28   E2A8K2   J9M2N4   A0A3S2L852   J9KVX0   A0A1B0DIH9   A0A1Y1NAF9   J9LK29   A0A2G8K6E3   A0A1Y1K3Z7   A0A1Y1NAZ4   A0A1Y1KUU3   A0A2S2NN55   V5G3X1   A0A1Y1KXB8   J9KNF9   A0A151IXT1   A0A151IN16   J9KZX8   A0A1Y1MM65   A0A3N0YYE5   A0A1Y1MGS0   X1XME1   A0A1B0DHA7   A0A2S2PAX0   A0A151IJ13   A0A2S2PS39   J9L4L9   A0A1B0DHV4   A0A151J4S4   J9LU41   X1XT76   A0A151X5G2   J9LVS7   A0A151JB92   J9KLW0   X1WIR4   A0A0J7KTA5   A0A1B0D745  

Pubmed

28004739    20798317    28503490    24508170    25186727    24065732    + More
29023486   

EMBL

ODYU01003321    SOQ41917.1    GEZM01099613    GEZM01099610    GEZM01099604    GEZM01099599    + More
JAV53268.1    GEZM01099608    GEZM01099605    JAV53264.1    GEZM01099609    JAV53257.1    GL441823    EFN64217.1    GEZM01077470    JAV63295.1    ABLF02011460    ABLF02033413    GGLE01001112    MBY05238.1    ABLF02007004    ABLF02007005    ABLF02008523    ABLF02012848    ABLF02012849    ABLF02012851    GEZM01031190    GEZM01031189    GEZM01031180    JAV84979.1    GEZM01031195    GEZM01031187    GEZM01031186    GEZM01031184    GEZM01031182    GEZM01031181    JAV84992.1    KQ977321    KYN03587.1    KQ977365    KYN03296.1    NWSH01000621    PCG75234.1    ABLF02038040    ABLF02065516    RSAL01000057    RVE49849.1    ABLF02016100    GGMR01014547    MBY27166.1    KQ982672    KYQ52446.1    GGMR01004395    MBY17014.1    GGMR01018395    MBY31014.1    ABLF02016252    NWSH01001223    PCG72048.1    ABLF02011489    ABLF02009662    ABLF02031649    ABLF02031650    GFAC01001507    JAT97681.1    ABLF02016193    KK107641    EZA48371.1    GCES01153042    JAQ33280.1    HADY01024360    SBP62845.1    HAEJ01000494    SBS40951.1    AERX01031390    ABLF02033156    ABLF02003302    KQ979651    KYN20001.1    HAAD01001124    CDG67356.1    ABLF02013367    ABLF02015440    ABLF02057211    ABLF02009087    HADZ01019172    SBP83113.1    ABLF02015114    ABLF02008676    ABLF02008677    KQ980094    KYN17778.1    GGMR01015195    MBY27814.1    ABLF02015299    GEZM01060283    JAV71121.1    HAEA01002407    SBQ30887.1    ABLF02003891    ABLF02003892    ABLF02003893    ABLF02003894    ABLF02014815    ABLF02014817    ABLF02066539    ABLF02019247    ABLF02019254    ABLF02032544    ABLF02032554    ABLF02056709    ABLF02067302    ABLF02042324    ABLF02062307    ABLF02067566    KQ981062    KQ980795    KYN09968.1    KYN13021.1    KQ977081    KYN05929.1    GL437635    EFN70236.1    ABLF02005485    RSAL01000093    RVE47898.1    ABLF02003109    ABLF02024163    ABLF02065890    ABLF02066605    AJVK01034414    GEZM01007799    JAV94911.1    ABLF02018098    MRZV01000842    PIK43542.1    GEZM01095994    JAV55218.1    GEZM01007800    JAV94909.1    GEZM01073324    JAV65152.1    GGMR01005938    MBY18557.1    GALX01003736    JAB64730.1    GEZM01073325    JAV65151.1    ABLF02010172    KQ980298    KQ978748    KYN13019.1    KYN16830.1    KYN28629.1    KQ976993    KYN06573.1    ABLF02017766    GEZM01031193    GEZM01031192    JAV84976.1    RJVU01019282    ROL50904.1    GEZM01031183    JAV84989.1    ABLF02005824    ABLF02005825    ABLF02005826    ABLF02005827    ABLF02050516    ABLF02053731    AJVK01060859    GGMR01013915    MBY26534.1    KQ977417    KYN02849.1    GGMR01019037    MBY31656.1    ABLF02041912    AJVK01061645    KYN17779.1    ABLF02031636    ABLF02031641    ABLF02031645    ABLF02031655    ABLF02046386    ABLF02048949    ABLF02010159    KQ982514    KYQ55617.1    ABLF02008986    ABLF02008987    KQ979155    KYN22412.1    ABLF02005565    ABLF02021063    LBMM01003425    KMQ93551.1    AJVK01026634   

Proteomes

UP000000311    UP000007819    UP000078542    UP000218220    UP000283053    UP000075809    + More
UP000053097    UP000005207    UP000078492    UP000092462    UP000230750    UP000036403   

Pfam

PF12017   Tnp_P_element        + More
PF05485   THAP
PF14291   DUF4371
PF00076   RRM_1

Interpro

IPR006612   THAP_Znf        + More
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
IPR012337   RNaseH-like_sf       
IPR025398   DUF4371       
IPR001315   CARD       
IPR034772   CPSF6/7       
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR034771   CG7185-like       
IPR035979   RBD_domain_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF54928   SSF54928       

Gene 3D

3.30.40.180     3.30.70.330    

ProteinModelPortal

A0A2H1VM77   A0A1Y1JYF3   A0A1Y1JVC6   A0A1Y1K320   E2AQS3   A0A1Y1KU95   + More
J9KAE9   A0A2R5L6W6   X1X489   X1X5Z2   J9JZH0   A0A1Y1MGQ7   A0A1Y1MGQ8   A0A151IJM3   A0A151IJP2   A0A2A4JUC7   J9M688   A0A3S2PFD8   J9LNJ4   A0A2S2PE11   A0A151WXA5   A0A2S2NIL6   A0A2S2PNR3   J9KWL5   A0A2A4JJZ8   J9KRW2   J9LRN9   J9JRC6   J9L444   A0A1E1XEX7   J9K966   A0A026VY20   A0A146NQI8   A0A1A8B8M0   A0A1A8U049   I3JY54   J9JUB1   J9LWE0   A0A151J7W4   T2M5L7   J9LWZ8   J9K2S6   A0A1A8CVN9   J9LL83   J9LZ19   A0A151J4W4   A0A2S2PEK2   J9LVQ5   A0A1Y1LE13   A0A1A8D9U5   J9KY26   J9JTA4   J9JS62   X1X8L8   J9KRT1   A0A151IXW5   A0A151IM28   E2A8K2   J9M2N4   A0A3S2L852   J9KVX0   A0A1B0DIH9   A0A1Y1NAF9   J9LK29   A0A2G8K6E3   A0A1Y1K3Z7   A0A1Y1NAZ4   A0A1Y1KUU3   A0A2S2NN55   V5G3X1   A0A1Y1KXB8   J9KNF9   A0A151IXT1   A0A151IN16   J9KZX8   A0A1Y1MM65   A0A3N0YYE5   A0A1Y1MGS0   X1XME1   A0A1B0DHA7   A0A2S2PAX0   A0A151IJ13   A0A2S2PS39   J9L4L9   A0A1B0DHV4   A0A151J4S4   J9LU41   X1XT76   A0A151X5G2   J9LVS7   A0A151JB92   J9KLW0   X1WIR4   A0A0J7KTA5   A0A1B0D745  

KEGG

101736929    no KO assigned | (RefSeq) uncharacterized LOC101736929

GO

GO:0004803   GO:0006313   GO:0003677   GO:0003676   GO:0042981   GO:0016021   GO:0003723   GO:0043531   GO:0051276   GO:0016491   GO:0016620   GO:0016787   GO:0015930  

PANTHER

PTHR23204   PTHR23204:SF7  

Length:

535

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.61461

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07833

outside

1  -  535

 

 

Pi

112.318873

Theta

146.84106

Tajima's D

-0.906712

CLR

75.437796

CSRT

0.152842357882106

Interpretation

Uncertain