Gene

KWMTBOMO13672

Pre Gene Modal

BGIBMGA011028

Annotation

PREDICTED:_cell_division_cycle_protein_20_homolog_[Papilio_xuthus]

Location

Bomo_Chr23(-):5393879-5399160      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.906

CDS

ATGGATGGCCCTATAACCCGAGGTCCATTGCAACGGTGGGCTAAAAAAGGCTGTAATGAAAATATAAATCCGTCTCTCAGTAACTCTTTCAAGAATCATTCAAATATTAACATAAGTTCGTGTAATCAATCGCTGCAGAAACTGTCCATATCTGCTAATCAAAGTTGTAACAATAGTGCATTGTCCAATAATAAAACACCAACGAGAAATGAAAATAAGAAAGGAAAAAAGACTCCTTCGAAAACGAAGTCTCCAGGTCATTCAACAACACCAACCCCAAACAAAGCATCAAAGACACCTAATAAAGCTGATAGATTCATCCCATCAAGGAGTAATTCAAATTATGACCTATGCCACTATATGTTGAGTCGTGATGATGACAAAAGTGAGGAAACCCCACAAACAGCTGCCGGAGAAGCAATAGGTAGAGCTCTGAATGATACTGAACCAGGTCGCCTCCTCCAGTATACTTGTAAAGCACCAGCAGCACCCGAAGGCTACCAGAACAGACTTAGAGTAGTATATTCACAGACAAAAGTTCCGTCATCAGTAAAATGCAACACTAGATACATACCTCAGGCTCCTGACAGGATACTTGATGCTCCTGAAATTTTAGATGACTATTATTTGAACCTTGTCGATTGGAGTGCATCAAACATTCTTGCAGTAGCATTAGGAAACTCTGTATATCTATGGAATGCTGGCACGGGACAAATAGAACAACTTCTAACCCTTGAAGGAGCAGAGACAGTCTGTTCTGTGGGATGGGTGCAAGGTGGTGGATCGCATCTGGCTGTTGGGACTTCAATGGCAACTGTAGAATTGTGGGACTGTGAAAAGATCAAACGTTTGAGGGTAATGGATGGTCACAGCGGTCGTGTCGGTTCTCTGGCTTGGAACATGTACATAGTGTCAAGTGGTGCCAGAGATGGACACATTGTTCACCACGACGTCAGGCAAAGAGATCATGCTGTCGCCAACATACATGGACATACACAAGAGATCTGCGGACTGAAATGGTCACCTGACGGTAGATATCTTGCATCGGGCGGCAACGATAATCTGCTGAACATTTGGCCAATTGCACAAGGACAACATTATTCACAGCCACAACATATACTTTCATTCAATCAACATCTAGCCGCAGTGAAAGGTCTCGCGTGGTGTCCGTGGAGCGCCGGCATCCTCGCGTCCGGCGGCGGTACGGCCGACAGAACTATACGGTTATGGAACATCAGTACTGGATCCAATCTTAATACTGTTGACACTAAATCTCAGGTTTGCTCTATAGTATGGAGCACTCACTACAAGGAGCTTATCTCGGGTCATGGGTATGCTCATAACCAACTAATCATATGGAAGTATCCAACAATGTCAAGAGTTGCAGAATTGTCAGGACATATGGCCAGAGTACTGCACCTTGCATTATCGCCTGATGGTACTACAGTACTATCTGCTGGCGCTGACGAAACCCTAAGATTATGGAAGTGCTTTATGTTAGATCCATCAAAGAAAAAAGAACCTACTGACGCGAAGGCAGCTAAGTCGCTGCTGAATCTCAATTCTCTCATCAGATAG

Protein

MDGPITRGPLQRWAKKGCNENINPSLSNSFKNHSNINISSCNQSLQKLSISANQSCNNSALSNNKTPTRNENKKGKKTPSKTKSPGHSTTPTPNKASKTPNKADRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALNDTEPGRLLQYTCKAPAAPEGYQNRLRVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEILDDYYLNLVDWSASNILAVALGNSVYLWNAGTGQIEQLLTLEGAETVCSVGWVQGGGSHLAVGTSMATVELWDCEKIKRLRVMDGHSGRVGSLAWNMYIVSSGARDGHIVHHDVRQRDHAVANIHGHTQEICGLKWSPDGRYLASGGNDNLLNIWPIAQGQHYSQPQHILSFNQHLAAVKGLAWCPWSAGILASGGGTADRTIRLWNISTGSNLNTVDTKSQVCSIVWSTHYKELISGHGYAHNQLIIWKYPTMSRVAELSGHMARVLHLALSPDGTTVLSAGADETLRLWKCFMLDPSKKKEPTDAKAAKSLLNLNSLIR

Uniprot

A0A2A4JXH4   A0A2H1VW01   A0A3S2NZY5   H9JNC5   A0A212EVB1   S4PDU2   + More
A0A194RA82   A0A1B6GJ63   A0A1Y1LIH0   K7ISD3   A0A232F777   A0A026WIT0   A0A1B6CMN1   A0A1B6KWR3   A0A0L7RAZ0   A0A1B6CXB3   A0A154PHN4   A0A158NVW0   D6WCR2   A0A0T6B1H0   A0A1B6CDG8   A0A0M8ZZM2   A0A1W4WBD0   A0A088A7Y0   A0A1B6E2R7   A0A2A3ENY0   A0A0J7KQX8   A0A291S6V9   A0A151ICI4   A0A195ESA0   E2BN97   A0A224XNL6   A0A0A9YM41   F4X4V6   A0A151HXY4   U5EZT8   A0A151X4W0   A0A1S3JGW5   A0A2J7RLY0   E2AX87   A0A336LNF8   N6TWY7   J9K6F6   A0A2H8TT50   A0A0L0CFN1   Q86MK0   A0A1I8MK24   A0A1B0CWH2   A0A0A1X767   T1HIF4   W8CBN0   A0A0K8UPS1   K1R5H7   A0A210QEX6   A0A084VM35   E0VGZ0   A0A034WG55   A0A182YNF0   M7C196   A0A0A0AJ35   A0A2G8K7L9   A0A182LWZ0   A0A182VUM5   A0A093F2H5   A0A1I8PRW0   K7FKI9   A0A1S4EQU6   A0A182IW47   A0A1Q3EVR6   A0A091QSK4   A0A3B0K649   A0A3M0K602   A0A1B0GCS7   A0A1A9UPX9   A0A091N3C8   A0A1S2ZXH4   A0A3L8SQ17   A0A091HQM6   A0A093C6Y9   A0A1A9WF02   A0A094KR47   A0A087V2G3   A0A093FZW3   A0A087RHH1   A0A2I0MC45   A0A1J1HSS0   E2RGS2   A0A091F6V4   A0A093NDJ8   A0A1L8GM26   A0A1L8GM25   A0A1U7T895   H0Z9X7   A0A1V4JX82   A0A091U3P8   A0A2C9JHF3   Q6P867   Q24044   G3TL12  

Pubmed

19121390    22118469    23622113    26354079    28004739    20075255    + More
28648823    24508170    21347285    18362917    19820115    28992199    20798317    25401762    26823975    21719571    23537049    26108605    25315136    25830018    24495485    22992520    28812685    24438588    20566863    25348373    25244985    23624526    29023486    17381049    30282656    23371554    16341006    27762356    20360741    15562597    7730407    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

NWSH01000423    PCG76499.1    ODYU01004759    SOQ44983.1    RSAL01000076    RVE48845.1    + More
BABH01019457    BABH01019458    BABH01019459    AGBW02012218    OWR45426.1    GAIX01003506    JAA89054.1    KQ460473    KPJ14414.1    GECZ01007291    JAS62478.1    GEZM01059724    JAV71386.1    NNAY01000827    OXU26298.1    KK107231    EZA55009.1    GEDC01022598    GEDC01014258    JAS14700.1    JAS23040.1    GEBQ01024099    JAT15878.1    KQ414617    KOC68087.1    GEDC01019211    GEDC01001610    JAS18087.1    JAS35688.1    KQ434899    KZC11004.1    ADTU01027543    KQ971317    EEZ98810.1    LJIG01016407    KRT80695.1    GEDC01025802    JAS11496.1    KQ435793    KOX74167.1    GEDC01005075    JAS32223.1    KZ288203    PBC33427.1    LBMM01004153    KMQ92753.1    MF432992    ATL75343.1    KQ978069    KYM97362.1    KQ981993    KYN31103.1    GL449385    EFN82859.1    GFTR01006847    JAW09579.1    GBHO01010320    GBRD01017692    GDHC01020438    JAG33284.1    JAG48135.1    JAP98190.1    GL888679    EGI58529.1    KQ976730    KYM76421.1    GANO01000168    JAB59703.1    KQ982522    KYQ55456.1    NEVH01002587    PNF41841.1    GL443520    EFN61970.1    UFQT01000063    SSX19285.1    APGK01048500    KB741112    KB632184    ENN73820.1    ERL89629.1    ABLF02011612    GFXV01005335    MBW17140.1    JRES01000539    KNC30299.1    AY236483    AAO85336.1    AJWK01032468    GBXI01007571    JAD06721.1    ACPB03001249    GAMC01000369    JAC06187.1    GDHF01023620    JAI28694.1    JH816764    EKC38794.1    NEDP02003955    OWF47285.1    ATLV01014577    KE524975    KFB39029.1    DS235154    EEB12646.1    GAKP01005283    JAC53669.1    KB533688    EMP34162.1    KL871737    KGL93035.1    MRZV01000808    PIK44016.1    AXCM01012412    KK387070    KFV51792.1    AGCU01029742    AGCU01029743    GFDL01015652    JAV19393.1    KK705742    KFQ30168.1    OUUW01000006    SPP81479.1    QRBI01000117    RMC08568.1    CCAG010002220    KL376153    KFP83946.1    QUSF01000010    RLW05850.1    KL217788    KFO98588.1    KL240502    KFV11700.1    KL352511    KFZ59832.1    KL477420    KFO06805.1    KK638743    KFV59914.1    KL226373    KFM12925.1    AKCR02000021    PKK27251.1    CVRI01000020    CRK91120.1    AAEX03009812    AAEX03009813    KK719659    KFO64567.1    KL224623    KFW62241.1    CM004472    OCT84890.1    OCT84889.1    ABQF01041516    LSYS01005497    OPJ76789.1    OPJ76790.1    KK497664    KFQ66449.1    BC061363    CR760268    AAH61363.1    CAJ83291.1    U22419    AE014134    BT029432    BT056243    AAA83150.1    AAF53523.1    ABK57089.1    ACL68690.1   

Proteomes

UP000218220    UP000283053    UP000005204    UP000007151    UP000053240    UP000002358    + More
UP000215335    UP000053097    UP000053825    UP000076502    UP000005205    UP000007266    UP000053105    UP000192223    UP000005203    UP000242457    UP000036403    UP000078542    UP000078541    UP000008237    UP000007755    UP000078540    UP000075809    UP000085678    UP000235965    UP000000311    UP000019118    UP000030742    UP000007819    UP000037069    UP000095301    UP000092461    UP000015103    UP000005408    UP000242188    UP000030765    UP000009046    UP000076408    UP000031443    UP000053858    UP000230750    UP000075883    UP000075920    UP000095300    UP000007267    UP000079169    UP000075880    UP000268350    UP000269221    UP000092444    UP000078200    UP000079721    UP000276834    UP000054308    UP000091820    UP000053286    UP000053872    UP000183832    UP000002254    UP000052976    UP000054081    UP000186698    UP000189704    UP000007754    UP000190648    UP000076420    UP000000803    UP000007646   

PRIDE

H9JNC5    Q24044   

Pfam

PF00400   WD40        + More
PF00619   CARD
PF17908   APAF1_C
PF00931   NB-ARC
PF00773   RNB
PF17877   Dis3l2_C_term
PF17849   OB_Dis3
PF12894   ANAPC4_WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR001680   WD40_repeat       
IPR033010   Cdc20/Fizzy       
IPR017986   WD40_repeat_dom       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       
IPR011029   DEATH-like_dom_sf       
IPR001315   CARD       
IPR036388   WH-like_DNA-bd_sf       
IPR041452   APAF1_C       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR027417   P-loop_NTPase       
IPR002182   NB-ARC       
IPR001900   RNase_II/R       
IPR041093   Dis3l2_C       
IPR041505   Dis3_CSD2       
IPR022966   RNase_II/R_CS       
IPR012340   NA-bd_OB-fold       
IPR024977   Apc4_WD40_dom       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF52540   SSF52540       
SSF47986   SSF47986       
SSF50249   SSF50249       

Gene 3D

2.130.10.10     1.10.10.10    

ProteinModelPortal

A0A2A4JXH4   A0A2H1VW01   A0A3S2NZY5   H9JNC5   A0A212EVB1   S4PDU2   + More
A0A194RA82   A0A1B6GJ63   A0A1Y1LIH0   K7ISD3   A0A232F777   A0A026WIT0   A0A1B6CMN1   A0A1B6KWR3   A0A0L7RAZ0   A0A1B6CXB3   A0A154PHN4   A0A158NVW0   D6WCR2   A0A0T6B1H0   A0A1B6CDG8   A0A0M8ZZM2   A0A1W4WBD0   A0A088A7Y0   A0A1B6E2R7   A0A2A3ENY0   A0A0J7KQX8   A0A291S6V9   A0A151ICI4   A0A195ESA0   E2BN97   A0A224XNL6   A0A0A9YM41   F4X4V6   A0A151HXY4   U5EZT8   A0A151X4W0   A0A1S3JGW5   A0A2J7RLY0   E2AX87   A0A336LNF8   N6TWY7   J9K6F6   A0A2H8TT50   A0A0L0CFN1   Q86MK0   A0A1I8MK24   A0A1B0CWH2   A0A0A1X767   T1HIF4   W8CBN0   A0A0K8UPS1   K1R5H7   A0A210QEX6   A0A084VM35   E0VGZ0   A0A034WG55   A0A182YNF0   M7C196   A0A0A0AJ35   A0A2G8K7L9   A0A182LWZ0   A0A182VUM5   A0A093F2H5   A0A1I8PRW0   K7FKI9   A0A1S4EQU6   A0A182IW47   A0A1Q3EVR6   A0A091QSK4   A0A3B0K649   A0A3M0K602   A0A1B0GCS7   A0A1A9UPX9   A0A091N3C8   A0A1S2ZXH4   A0A3L8SQ17   A0A091HQM6   A0A093C6Y9   A0A1A9WF02   A0A094KR47   A0A087V2G3   A0A093FZW3   A0A087RHH1   A0A2I0MC45   A0A1J1HSS0   E2RGS2   A0A091F6V4   A0A093NDJ8   A0A1L8GM26   A0A1L8GM25   A0A1U7T895   H0Z9X7   A0A1V4JX82   A0A091U3P8   A0A2C9JHF3   Q6P867   Q24044   G3TL12  

PDB

6F0X     E-value=5.00656e-137,     Score=1251

KEGG

101738065    K03363 cell division cycle 20, cofactor of APC complex | (RefSeq) cell division cycle protein 20 hom

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0010997   GO:1904668   GO:0031145   GO:0097027   GO:0043531   GO:0042981   GO:0051301   GO:0004540   GO:0003723   GO:0003743   GO:0004402   GO:0019899   GO:0008022   GO:0005654   GO:0005829   GO:0005680   GO:0090307   GO:0007064   GO:0031915   GO:0040020   GO:0090129   GO:0007147   GO:0000278   GO:0060547   GO:0000776   GO:0005813   GO:0061630   GO:0030718   GO:0007144   GO:0007096   GO:0097150   GO:0005819   GO:0005737   GO:0030163   GO:0030162   GO:0005515   GO:0006836   GO:0016021   GO:0051276   GO:0016491   GO:0016620   GO:0016787   GO:0003676   GO:0015930  

PANTHER

PTHR19918  

Length:

525

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0344

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00076

outside

1  -  525

 

 

Pi

247.055069

Theta

189.367262

Tajima's D

0.832053

CLR

14.679702

CSRT

0.615469226538673

Interpretation

Uncertain