Gene
KWMTBOMO13669
Pre Gene Modal
BGIBMGA011081
Annotation
PREDICTED:_sodium-_and_chloride-dependent_glycine_transporter_1_[Amyelois_transitella]
Location in the cell
PlasmaMembrane Reliability : 4.825
Sequence
CDS
ATGGAAGTTGTTAACACAGATGAAGGGCGCTATGAACAAACTGAAAATTTACCAGGGAACAGTGCGGCCGATAGCGACGCTTCGAGTAGTGTTTTCGAAGGCAACGATAGCGATCGGTGTAGTGAGGACTTTGACGGGATTTCAGATGACGGCGATCTAAGGGAAGACCTGCAGAAATCCATCGCAGAATGTTACAGGTCCGACTCGAATTTTTCATCTCAAGCAACAAGCGACATCACAAATGACGAAGAATTTCAGGCGACTGCGCTCGTCCAGTTCATGGATATACTGAATGACCTGGACGAAGTTCTAGACAAGTCTCTCTTGGCATGTTTAGACGACGACACAGCAAACTACGACAGCGACGAAAACGATCTTATTTGTAAAATTAAAGAATGTATCGGGGATACTCAAGATCAGTCGGAACATTCCGAAGCATTAAGTTCAATGGACGAAAATACTCAAGTAATCACTTGTACAAACTACGCACCCTCTGTACCTTCGATAGAAGATTTAGATATAACGCAAGGTGTATCGCAACGACCGCAAACTACAGGCTTGGGAAGATCGAAAAGCTACTCAGATGTGTCAGCCCGTGATGTCGTTTCAAGCGTGGAGAGAGCCAGCACTACAAATGACAATGTGCGTAATTCAATGAGGAGATTAGATCCGATTGTTTTACCGGCGATAACAACAGAACAGCCTTTGACGTTGCCGGTTATATTGTTCTTGGAACATAATGTTAATATGCGCCCGACAAGCGTACCGATACAGCTTCAGGTGACGGCTGCTAATCTGAGCACTGACGGAGCATCAGGACCGCTGATCGTCGGGCGGCGTACTCTACTCATGAATCGGGCCCTCTCGTTGCCTTCTCCGGGCGACAGTGAAGCCGCAGCCGGAGAGTGGACGGGTCGAAACACTGCCAGGAGTACAGCAAGAAGCAGCACCACATCGAGCTCGTCAAACGAATCGTTAAATGTTGCTGTGGTCAATCAAAGTGCCAACAATGGTACGGAGGAGAGAAACGAAGAGACTGAAGAACCTCCTTTTGGAGTTTGGCCTCATCGTATGAGTTCGATGTTGGCCTGTTTGAGTTGTACTGTTGGTATTTTCAACATTTCTAGATTTGCCATATTCAGCGTTCATTTTGGAGCGAGTTTTATAATACAGTTTTTAATACTGTCTCTGTTTGTTGGAATACCCCTTTTTACACTTTACTTATGTTTGGGTCAAGTATTGGAAGCTGGGCCAGTGGATATGTGGAGGATCTCGCCAATATTCCAAGGTGTTGGTATATCATTGCTCATCACCCAAGCCGTAATTGGAATGTACAGCATAATTGGTCTTTCTTGGATATTCGTGTACTTTCGAGATTCATTCATTAATTCTAACGACAAATACAAATGGGCGCTGCCGCATGAATTCAATATCGAAGATCCCGCGAGCCGAAACGGTACATACAAAATTCACGAGACGATACCACAATATTTTCACGGCGAGGTCCTACAAAGAAATCTGCTTTCTAACGGCAATACGTATTTCGGAACGATTAAGTTTCAAGTTGCGTTCAATTTGGCCGTGGTGTGGATGATCGTTTTCGTCGCGCTGAGCAAAGGACTGCGATCGTACGGCAAGGCCGTTTACATATTAATATTTCTGCCGATATGCGGAACCCTTGTGCTGTGCACGAAACTGTTGACGCTGATACCGTACGACACCGTCACGAATATATTCGCCGAGACCGAATGGACGGAGTTCTTCGTGAACAGTAACAGTTGGGCGGCGGCGGCACAGGAGACATTCCTAACGTGGGGCTTGCTAGGGGCCTGCGTGATGCAACTGACGTCCCACAAGAACGCAAAGAACAAAACCAGTGGTATGCTGCAGAGGGAGAGCGCCTGCATCATAGCATTCACTTTCGCGGTTTTGTTGCTCGGCTCGTTTTTAGCTAACACCTGCGTACAGATACTGAAGAACTATGGATACGTTTATATACCCGGCAGCTTTGAAACAGTCAAATCATCACAATTTCTGTGGCCTAAAACGGAGCCACTGCCTGGGAATTCTGCCTCGACTCCTTTGCGTTATATGGGACATTACGGCAGTATCGTCGGTGTTACGGTTTGGCGTACTGGCAATGCGGCTCGAATATACAGCGGATGGCAGCCTCTGCAACTGGCCACACAGCTAGTGCCGGCCACTTTGGCAGTGCTGCCAGCTAACTTGGTAAGCATTTTTGGTTATCCATAA
Protein
MEVVNTDEGRYEQTENLPGNSAADSDASSSVFEGNDSDRCSEDFDGISDDGDLREDLQKSIAECYRSDSNFSSQATSDITNDEEFQATALVQFMDILNDLDEVLDKSLLACLDDDTANYDSDENDLICKIKECIGDTQDQSEHSEALSSMDENTQVITCTNYAPSVPSIEDLDITQGVSQRPQTTGLGRSKSYSDVSARDVVSSVERASTTNDNVRNSMRRLDPIVLPAITTEQPLTLPVILFLEHNVNMRPTSVPIQLQVTAANLSTDGASGPLIVGRRTLLMNRALSLPSPGDSEAAAGEWTGRNTARSTARSSTTSSSSNESLNVAVVNQSANNGTEERNEETEEPPFGVWPHRMSSMLACLSCTVGIFNISRFAIFSVHFGASFIIQFLILSLFVGIPLFTLYLCLGQVLEAGPVDMWRISPIFQGVGISLLITQAVIGMYSIIGLSWIFVYFRDSFINSNDKYKWALPHEFNIEDPASRNGTYKIHETIPQYFHGEVLQRNLLSNGNTYFGTIKFQVAFNLAVVWMIVFVALSKGLRSYGKAVYILIFLPICGTLVLCTKLLTLIPYDTVTNIFAETEWTEFFVNSNSWAAAAQETFLTWGLLGACVMQLTSHKNAKNKTSGMLQRESACIIAFTFAVLLLGSFLANTCVQILKNYGYVYIPGSFETVKSSQFLWPKTEPLPGNSASTPLRYMGHYGSIVGVTVWRTGNAARIYSGWQPLQLATQLVPATLAVLPANLVSIFGYP
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00209 SNF
SUPFAM
SSF161070
SSF161070
ProteinModelPortal
PDB
6DZW
E-value=2.91385e-19,
Score=237
Ontologies
GO
PANTHER
Topology
Length:
750
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
161.96771
Exp number, first 60 AAs:
0
Total prob of N-in:
0.39691
outside
1 - 357
TMhelix
358 - 380
inside
381 - 392
TMhelix
393 - 415
outside
416 - 434
TMhelix
435 - 457
inside
458 - 514
TMhelix
515 - 537
outside
538 - 546
TMhelix
547 - 569
inside
570 - 632
TMhelix
633 - 655
outside
656 - 726
TMhelix
727 - 749
inside
750 - 750
Population Genetic Test Statistics
Pi
277.788347
Theta
187.777738
Tajima's D
1.242801
CLR
0.087142
CSRT
0.72186390680466
Interpretation
Uncertain
