SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13668  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011029
Annotation
PREDICTED:_acetyl-CoA_acetyltransferase?_mitochondrial_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.23 Mitochondrial   Reliability : 1.529
 

Sequence

CDS
ATGAAGCCAATATTTACAGCAATGGCAGCATTCTCGACCAAAGTTTCCCTCAACGAAGTAGTAATTGCATCAGCAGTTAGAACTCCTATGGGTTCTTTCCGAGGGAGCTTATCTAGTTTATCAGCATCAGAATTAGGCGCTGTCGCTGTTAACGCGGCAATCGAAAGAGCCGGTATTCCTAAAGAAGAAATAAAAGAGGTCTACATTGGCAATGTTTGTTCTGCAAATTTGGGCCAAGCACCTGCAAGACAAGCTGTAATATTTGCAGGTTTGCCAAAAAGTACCATATGTACAACTGTAAACAAAGTATGTGCCTCTGGCATGAAATCTATAATGTTGGCAGCACAAGGTCTACAAACTGGAGCCCAAGATATAATACTTGCTGGTGGGATGGAATCTATGTCAAATGTACCTTTTTATTTGAAGAGAGGTGAAACTTCATATGGAGGAATGCAGTTAGTTGATGGAATAGTGTTTGATGGGCTCACAGATGTGTACAACAAATTTCACATGGGAAATTGTGCTGAAAACACAGCAAAAAAATTACAAATTACTAGACAAGATCAAGATGAATATGCTGTCAATAGTTACAAGAGAAGTGCAGCTGCTTATGAAGCTAAAGCTTTTGTTGATGAACTTGTACCAGTACCCGTTCCACAGAAAAGAGGGGCTCCTGTAATATTTGCTGAAGATGAAGAGTATAAAAGAGTTAATTTTGAAAAGTTTACAAAATTGTCTACGGTATTCCAAAAGGAAAATGGCACTGTTACTGCAGGCAATGCTTCAACATTAAATGATGGAGCTGCAGCTTTAGTGTTAATGACGGCTGATGCCGCTAAAAGATTAAATGTCAAGCCGATTGCCCGAATTGTTGGATTTGCTGATGGGGAATGTGATCCCATTGACTTCCCAATAGCACCAGCGGTTGCCATTCCTAAATTATTAGAGAAGACTGGTGTCAGGAAGGAAGATGTTGCATTGTGGGAGATAAATGAAGCTTTCAGTGTTGTTGCTGTTGCAAATCAAAAATTATTAGGATTAGATCCATCAAAAATTAATGTACATGGTGGAGCTGTCAGTTTGGGTCATCCAATTGGTATGTCTGGAGCTCGCATTGTTGTACATCTGTGCCATGCTTTAAAAAAAGGAGAAAAGGGAGTTGCTTCAATTTGTAATGGTGGAGGTGGTGCATCATCTGTAATGATTGAAAAAATAGCCGAAACTCCAGAAGAGCTACCGGTTTTGACATTTTATACCAAAGATCCATGTGGTCTCTGTGATTTAGTTATGGAAGACCTTGAACCATATAAAAAGAGACTTATCATACAAAAAATTGATATCACTCAAAAAGAAAATTTGCGGTGGTTACGCCTTTATAGACTTGAAATACCAGTCTTATTCTTGAATGGACATTTTTTATGTAAACATAAGTTAAACAAAGATCTTCTTGAGAAAAAGTTGACATTAATTGAAATAGAAAAAAAACAAACATCATAA
Protein
MKPIFTAMAAFSTKVSLNEVVIASAVRTPMGSFRGSLSSLSASELGAVAVNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGAAALVLMTADAAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKIAETPEELPVLTFYTKDPCGLCDLVMEDLEPYKKRLIIQKIDITQKENLRWLRLYRLEIPVLFLNGHFLCKHKLNKDLLEKKLTLIEIEKKQTS

Summary

Similarity
Belongs to the thiolase-like superfamily. Thiolase family.
EMBL
KQ459600    KPI94110.1    AGBW02012218    OWR45428.1    KQ460473    KPJ14412.1    + More
ODYU01000581    SOQ35615.1    KJ579206    AIN34682.1    JTDY01011334    KOB56897.1    GEYN01000174    JAV44815.1    BABH01019456    AB274988    BAF62106.1    KQ971312    EEZ97970.1    KB632410    ERL95190.1    GAIX01005513    JAA87047.1    KK107347    QOIP01000007    EZA52249.1    RLU20939.1    KQ414617    KOC68080.1    GL437329    EFN70601.1    NNAY01000759    OXU26649.1    AK403218    BAM19639.1    KQ977041    KYN06116.1    KU755506    ARD71216.1    KQ982562    KYQ54912.1    ATLV01022681    KE525335    KFB47941.1    KQ981993    KYN30916.1    GL447952    EFN85668.1    KQ976424    KYM88603.1    ADMH02001457    ETN62505.1    KQ434899    KZC11011.1    JXUM01107962    JXUM01107963    JXUM01107964    JXUM01107965    JXUM01107966    JXUM01107967    JXUM01107968    KQ565188    KXJ71243.1    AXCN02001111    NWSH01000423    PCG76497.1    AXCM01006132    MF706171    ATJ44598.1    MF687639    ATJ44565.1    KY971766    AUA18033.1    GECU01014391    JAS93315.1    APCN01004493    DS233428    EDS29933.1    KQ978983    KYN26818.1    KK853270    KDR09162.1    GEDC01017649    JAS19649.1    UFQS01000042    UFQT01000042    SSW98319.1    SSX18705.1    KZ288203    PBC33434.1    CVRI01000073    CRL07747.1    GFDF01002414    JAV11670.1    GFDF01002385    JAV11699.1    GAPW01001060    JAC12538.1    JQ855638    AFI45001.1    GFDF01002492    JAV11592.1    GFDF01002491    JAV11593.1    GL888275    EGI63455.1    ADTU01024274    KP689334    AKO63316.1    KQ435793    KOX74160.1    GBYB01006109    JAG75876.1    GEZM01042666    JAV79742.1    AY966010    AAX78436.1    GGFM01007037    MBW27788.1    GGFM01007027    MBW27778.1    ODYU01000159    SOQ34458.1    KU755503    ARD71213.1    GDIQ01036854    JAN57883.1    GGFK01005401    MBW38722.1    GGFJ01005861    MBW55002.1    GDIQ01214056    GDIQ01109284    JAK37669.1    GDIQ01081802    JAN12935.1    GGFK01005391    MBW38712.1    CH477399    EAT41757.1    GECZ01006479    JAS63290.1    GDIQ01131134    JAL20592.1    GDIP01074264    LRGB01000115    JAM29451.1    KZS20723.1    GAMD01001528    JAB00063.1    GGFK01005425    MBW38746.1    GDIQ01214057    JAK37668.1    GECZ01014721    GECZ01003669    JAS55048.1    JAS66100.1    KT261712    ALJ30252.1    JRES01001480    KNC22563.1    GEDC01005219    JAS32079.1    GECU01034670    GECU01018604    GECU01012360    JAS73036.1    JAS89102.1    JAS95346.1    GGFJ01005864    MBW55005.1    GDIQ01247346    JAK04379.1    GDIP01088713    JAM15002.1    GDIQ01241102    JAK10623.1    GANO01002599    JAB57272.1    KA646977    AFP61606.1   
Pfam
PF05768   DUF836        + More
PF02803   Thiolase_C
PF00108   Thiolase_N
Interpro
IPR002155   Thiolase        + More
IPR020613   Thiolase_CS       
IPR020610   Thiolase_AS       
IPR020616   Thiolase_N       
IPR016039   Thiolase-like       
IPR020615   Thiolase_acyl_enz_int_AS       
IPR036249   Thioredoxin-like_sf       
IPR008554   Glutaredoxin-like       
IPR020617   Thiolase_C       
IPR002109   Glutaredoxin       
SUPFAM
SSF53901   SSF53901        + More
SSF52833   SSF52833       
Gene 3D
PDB
2IBY     E-value=5.6798e-135,     Score=1233

Ontologies

Topology

Length:
498
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0883599999999999
Exp number, first 60 AAs:
0.05946
Total prob of N-in:
0.00492
outside
1  -  498
 
 

Population Genetic Test Statistics

Pi
278.925506
Theta
208.942146
Tajima's D
1.168368
CLR
0
CSRT
0.703414829258537
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 AGIPKEEIK 96.30 8e-12
26822097 IVVHICHAIK 100.00 4e-10
26280517 IVGCVQDHAR 100.00 4e-10
25044914 IVGENITIQGNIDPQDIYK 100.00 4e-10
28467696 IVGEINPIATSTDIVITITK 100.00 4e-10
28556443 IVGFADGECDPIDFPIAPAVAIPK 100.00 4e-10
28556443 INVHGGAVSLGHPIGMSGAR 100.00 4e-10
28556443 INVHGGAVSLGHPIGMSGAR 100.00 4e-10
28556443 INVHGGAVSLGHPIGMSGAR 100.00 4e-10
26280517 EEIISMSIGK 95.45 2e-08
25044914 EEIIYVVCVRPNK 95.45 2e-08
28467696 EEIGITDSIVR 95.45 2e-08
28556443 INVHGGAVSLGHPIGMSGAR 100.00 6e-08
28556443 INVHGGAVSLGHPIGM 100.00 6e-08
28556443 GVASICNGGGGASSVMIEK 100.00 6e-08
28556443 INVHGGAVSLGHPIGM 100.00 6e-08
26280517 KCESGYDVNYKQDK 95.45 9e-08
25044914 KEDINFESK 95.45 9e-08
28556443 EVYIGNVCSANLGQAPAR 100.00 3e-06
28556443 EVYIGNVCSANLGQAPAR 100.00 3e-06
28556443 ENGTVTAGNASTLNDGAAALVLMTADAAK 100.00 3e-06
28556443 EVYIGNVCSANLGQAPAR 100.00 3e-06
28556443 ENGTVTAGNASTLNDGAAALVLMTADAAK 100.00 3e-06
28556443 ENGTVTAGNASTLNDGAAALVLMTADAAK 100.00 3e-06
26280517 GTNINDSGDNAAQNDVTK 100.00 1e-05
28467696 GVARPPPAPTSTPGGRPR 100.00 1e-05
28556443 GVASICNGGGGASSVMIEK 100.00 1e-05
28556443 GVASICNGGGGASSVMIEK 100.00 1e-05
28556443 GSLSSLSASELGAVAVNAAIER 100.00 1e-05
28556443 GVASICNGGGGASSVMIEK 100.00 1e-05
28556443 GSLSSLSASELGAVAVNAAIER 100.00 1e-05
28556443 GSLSSLSASELGAVAVNAAIER 100.00 1e-05
28556443 GVASICNGGGGASSVMIEK 100.00 3e-05
28556443 GVASICNGGGGASSVMIEK 100.00 3e-05
26280517 RGAECGAVGHCTATVWEK 100.00 2e-04
26280517 STFSGYSNIEVR 100.00 3e-04
28556443 ENGTVTAGNASTLNDGAAALVLMTADAAK 100.00 4e-04
28556443 AFVDELVPVPVPQK 100.00 4e-04
28556443 AFVDELVPVPVPQK 100.00 4e-04
28556443 AFVDELVPVPVPQK 100.00 4e-04
28556443 GGMESMSNVPFYLK 100.00 8e-04
28556443 GAPVIFAEDEEYKR 100.00 8e-04
28556443 GAPVIFAEDEEYKR 100.00 8e-04
28556443 LLGLDPSK 100.00 8e-04
26280517 FECISDGICIPR 100.00 0.002
26280517 QDGESEPYAEEAR 100.00 0.003
28467696 QDQDEYAVNSYK 100.00 0.003
26822097 STICTTVNK 100.00 0.003
26280517 GAPPIIDVASIIAR 100.00 0.003
27102218 AFVDEIVPVPVPQKR 100.00 0.003
28467696 GAPNMINTFWEQSTVDIAR 100.00 0.003
28556443 GAPVIFAEDEEYKR 100.00 0.003
28556443 GAPVIFAEDEEYK 100.00 0.003
28556443 EVYIGNVCSANLGQAPAR 100.00 0.003
28556443 EVYIGNVCSANLGQAPAR 100.00 0.003
26822097 GAPVIFAEDEEYKR 100.00 0.006
26280517 FCAQGCSAIADTGTSIIAGPSK 100.00 0.006
25044914 FHISVSDDNSGR 100.00 0.006
28556443 EVYIGNVCSANLGQAPAR 100.00 0.006
28556443 GAPVIFAEDEEYK 100.00 0.006
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 QDQDEYAVNSYK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 AFVDELVPVPVPQK 100.00 0.009
28556443 GGMESMSNVPFYLK 100.00 0.009
28556443 VFNTWMGDPGK 100.00 0.009
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