Silkworm Genome Informatics Database

Gene

KWMTBOMO13648

Pre Gene Modal

BGIBMGA011038

Annotation

18_wheeler_[Operophtera_brumata]

Location

Bomo_Chr23(-):4458059-4462181 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.998 PlasmaMembrane Reliability : 1.541

CDS

ATGTTTCAATTTCTGACTCTTTTGTTTGTGACTTTTGGTGTCAATGCGGCCTATGCTCGTGGCGTTGATAATTGTAGTCGCCAGAGCAAAGGTGACAATAGCACTCTGTGCCGGGTGCGAACCCTTGACGCTGACGGATCCAGCTTAGCATCTGCACCTACAGAAACTACAAAGCGTCTCGACATCGAATGCAACCAGCTGCTACTGTTTGAAAGTTATTTGGAGGCGAACTACTTTCAAAGGTTTCACGAGCTCACAGAATTAACAATTCGGAACTGCAAGCTTCTGAGAATACCAGGCAATGCCTTCGAAGGATTACGTGAACTGAAAAAGTTGTCGATCCGATCTAAAAACTACGATTGGAGCTCGAACAAAAACTTGGAACTCTCGTTGGGTACTTTCAACGGATTACGTGAATTACAAGCACTCGATTTAGGACAAAATAATTTAAAGACTATACCTTCAGAAGTGTTTTGTCCATTGGACAACTTGCAGACACTAAACGTTACCGGTAACAAATTAAAAAGTGTCGATCGTCTCGGCTTCGGTAAAAATTGCGGATCTGGCTTACGAAGATTGGACCTGAGCCGGAATGAAATCAAATCTTTGCCTGAAGAGTCCGAAATAATCGGATTGAAAAGGCTTCAAGAATTAAAACTACAACATAATAACATCACAGACATTTCAGGTGAAACGTTTAACGGACTCATTTCTTTAAGAATATTAAATGTTTCCTACAACAACATTCAGTTTATCCCTGAGGGCACATTCGCCAGCACGAAAGAGTTACGAGAAGTGTATTTGAATAATAACCTGCTATTTGAACTAGCCAGAGGCGTGTTCCACCGATTAGAACAGCTGCTTGTCTTAGATTTATCGTATAATCAGCTATCTAGTGCTCATATAGATGGCGGTACATTTGTTGGCCTCATACGCCTAGTCATTTTGAATTTGTCGAATAATGCATTGACAAGGATAGACTCTAAGACGTTCAAGGATTTATTCTTTCTCCAAATATTAGATTTAAGAAACAATTCAATTGGATATATAGAAGAAAATACTTTTCTTCCATTGTACAATCTTCACACATTGAATTTAGCTGAAAACCGATTGCATATGATAGACGAGTATCTCTTCAATGGATTGTTTGTACTTAGTAAATTGAACTTAAATAATAATCTCCTTATAAACATAGATATAAATGCATTTAAAAATTGTTCGGATTTAAAAGAATTAGATTTAAGCTCGAATCAGTTATTGGATGTTCCAAACGCCATCTGGGAATTATCTCAATTAAAAACGTTAGATCTTGGTGAAAATCAAATAAAAGACATAAAAAATGGATCATTTAAGAGCTTAGATCAACTAACCGGTTTGAGATTGATAGACAACCAAATCGGTAATTTGAGTGTGGGTATGTTTTCTGAACTACCAAGCCTACAGGTTTTAAACTTAGCCAAGAATAAAATTTTAGCCGTAGAACTTGGTAGTTTTCAAAATAATAAACAATTAGAGGCCATAAGATTAGATGGAAATTTTATATCCGATATTAATGGCGTATTCTCGAGGCTGATGAGTTTGTTATGGCTAAATTTGTCGGAAAATCATTTAGTCTGGTTTGATTACGCTTTTATTCCAAGTAACTTGAAGTGGCTGGACGTCCATGGCAATTTTATTGAACATTTAGGAAATTATTACAAGCTTCAAGACGAAATCCGCATAAAAACTTTAGACGTAAGCCATAATCGTATAGTCGATATTTCTCCATTAGCTATTCCAAACAGTGTTGAGTTATTATTCATAAACAACAATCACATCAATAACATTCAAGTAAACACTTTTATGGAGAAGCACAATTTGACCCGTGTTGATATTTACGCAAATGAGATATCTCACTTAGACATCAACAGCCTACGCTTATCTCCTGTACCTCTGAATAAGTCACTACCGGAGTTCTACATTGGCGGAAATCCATTTGATTGCGATTGCTCCATGGAATGGCTACCTTTGATAAACAATATGACAACAATGAGACAACATCCACGCATCATGGACTTAGAGAACGTATTATATAATGTTCCTAAAATTGTTGATGTAACAGATATATCGTGTTGGAACGTCGATACAAAAACTACACAAAAGAAAGAACTTAATCTCAACGGAACGATTTGTAGTGATTATTACGCTGGCGATTCGGTTATAGATAACATTTTAGTATCGAATTACATGCCTATGATGGTAACGACTCTCTCCGGATTCATGTTGATTATGTTAGTCATCCTTGTGATTTTCATATTCAGAGATACGGTTCGTATATGGCTCTTCACAAGCTGCGGGATTAGATTGTTTCCATTCAACGGAGCGTACGACGACACTGATAAATTATACGACGCTTACGTCTGTTACAGTCCAAAGGATGACGATTTTGTTATTCAAACCCTAGCTGCCGAGTTAGAGAATGGTAATCCATCGTATCACCTCTGCTTGCATTACAGAGATATACCGCAACATAATGTTGCTTATATGCAATGCACGTTACCACTTCCCGAGTGCGCGGAAGCGTCCAAACGCATTATACTAGTACTGACCAGAAATTTCATAGAAACGGAATGGTCGCGTTTCGAATTCCGACAGGCCCTACACGAAATAGTTAAGTCACGTATTTATACTTTAGTGATAATAGAAGAGGGTTCAATTTTGCCCGAGGCCGAATGCGATCCTGATTTAAGGCCGTACTTGAAAACAAGCTCAAGGATAAGATGGGGCCAAAATAAATTTTGGGAAAAGTTACGATACGCGATGCCGGATAAGAGATACAAATCTAAAACGTCTGCCTACAGAAATAATATAAATTCTTATTCAATGCGAAGTGCCACCCAGAACGGAACAATGCGATCTTTTTCTTTCACTGAGAAAATGAGAGGTTCGGCAGATGGTGTCAGTACGAGTCCAGAGTTCGTCGACCCCGCGTCTCAGCACGTGCCTGTAGCATCGTATGGACCGGACGGTAGACCACCCTCGGACCATATTTACTCATCGATAGATTCGGACTACTCATCCCTAGAGCTAGGTGCAAACAATCCGAATAGGAGACGCGAGTTCAGGCATTGGCCTCCGCCGCCACCTTTAATTGACACTCAAAGCTCAGGTCAAGCTTATCTTGTCTAG

Protein

MFQFLTLLFVTFGVNAAYARGVDNCSRQSKGDNSTLCRVRTLDADGSSLASAPTETTKRLDIECNQLLLFESYLEANYFQRFHELTELTIRNCKLLRIPGNAFEGLRELKKLSIRSKNYDWSSNKNLELSLGTFNGLRELQALDLGQNNLKTIPSEVFCPLDNLQTLNVTGNKLKSVDRLGFGKNCGSGLRRLDLSRNEIKSLPEESEIIGLKRLQELKLQHNNITDISGETFNGLISLRILNVSYNNIQFIPEGTFASTKELREVYLNNNLLFELARGVFHRLEQLLVLDLSYNQLSSAHIDGGTFVGLIRLVILNLSNNALTRIDSKTFKDLFFLQILDLRNNSIGYIEENTFLPLYNLHTLNLAENRLHMIDEYLFNGLFVLSKLNLNNNLLINIDINAFKNCSDLKELDLSSNQLLDVPNAIWELSQLKTLDLGENQIKDIKNGSFKSLDQLTGLRLIDNQIGNLSVGMFSELPSLQVLNLAKNKILAVELGSFQNNKQLEAIRLDGNFISDINGVFSRLMSLLWLNLSENHLVWFDYAFIPSNLKWLDVHGNFIEHLGNYYKLQDEIRIKTLDVSHNRIVDISPLAIPNSVELLFINNNHINNIQVNTFMEKHNLTRVDIYANEISHLDINSLRLSPVPLNKSLPEFYIGGNPFDCDCSMEWLPLINNMTTMRQHPRIMDLENVLYNVPKIVDVTDISCWNVDTKTTQKKELNLNGTICSDYYAGDSVIDNILVSNYMPMMVTTLSGFMLIMLVILVIFIFRDTVRIWLFTSCGIRLFPFNGAYDDTDKLYDAYVCYSPKDDDFVIQTLAAELENGNPSYHLCLHYRDIPQHNVAYMQCTLPLPECAEASKRIILVLTRNFIETEWSRFEFRQALHEIVKSRIYTLVIIEEGSILPEAECDPDLRPYLKTSSRIRWGQNKFWEKLRYAMPDKRYKSKTSAYRNNINSYSMRSATQNGTMRSFSFTEKMRGSADGVSTSPEFVDPASQHVPVASYGPDGRPPSDHIYSSIDSDYSSLELGANNPNRRREFRHWPPPPPLIDTQSSGQAYLV

Uniprot

NA

ProteinModelPortal

NA

PDB

4QXE E-value=4.2329e-27, Score=306

KEGG

101736604 no KO assigned | (RefSeq) slit homolog 3 protein-like

GO

GO:0005515 GO:0007165 GO:0005694 GO:0051276 GO:0016491 GO:0016620 GO:0016787 GO:0003676 GO:0015930

SignalP

Position: 1 - 16, Likelihood: 0.989067

Length:

1055

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.2144799999999

Exp number, first 60 AAs:

0.08726

Total prob of N-in:

0.00456

outside

1 - 743

TMhelix

744 - 766

inside

767 - 1055

Pi

242.779043

Theta

193.292481

Tajima's D

0.823771

CLR

0.633333

CSRT

0.610669466526674

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics