Gene

KWMTBOMO13639  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011070

Annotation

PREDICTED:_THO_complex_subunit_7_homolog_[Amyelois_transitella]

Location

Bomo_Chr23(+):3990749-3991971      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.475

CDS

ATGGGTGACGAAGATGTGATTCGTAGAAGACTTCTGATCGACGGTGACGGTACTGGAGACGACAGGAGACTGAATGTACTTTTAAAAACTTTGATAAAATGGTGCAATACAACGGATGACAAACCGGAAGAAAGTAAAGCTACTCATGATCGTATGTTAGCTCAACTGGCACAATGCGAATTTGCTGTCACAAAATCGCAACTCGGTTCTGAAATGATGGCTGCTGAATTAAAAAGCTACGAAGCACTCTCGAAAATTCTAGAAAGCGGAATAGAGGTGGCCAAAGAGAACATACAGAAGAGCAAAACAGATTTAGCACAAGCAAAGACTGTCAGAAAAAACAGAATAGAATATGATGTCTTGGCTAAGGTTATCAGTGAACAGCCTGATCGTAAGGAAACCTCTGAGAGATTGAGCACTCTGAAGACTGAACTAGCAAACTTGGAAACCACCAAACAGCAATTGGAAAGTCGGTTAGCATTACGAAAGAAACAATTTCATGTGCTTGTAACTTCAATACATCAATTACAAGCATTATTAGATGAACTAGATGATGCAGAGACTATTTGTGATGATGTTGATATGAAAGAAATATCAAATGAATCATAA

Protein

MGDEDVIRRRLLIDGDGTGDDRRLNVLLKTLIKWCNTTDDKPEESKATHDRMLAQLAQCEFAVTKSQLGSEMMAAELKSYEALSKILESGIEVAKENIQKSKTDLAQAKTVRKNRIEYDVLAKVISEQPDRKETSERLSTLKTELANLETTKQQLESRLALRKKQFHVLVTSIHQLQALLDELDDAETICDDVDMKEISNES

Uniprot

H9JNG7   A0A2W1BSM6   A0A2A4J1V3   A0A1E1WII7   A0A2H1VT37   A0A212EKS7   + More
I4DQ44   A0A194RA53   S4NQ10   A0A2J7PWS4   A0A2P8ZFP3   A0A067QZ86   A0A194PXF8   A0A1B6JQG2   A0A1B6M5F0   A0A1B6FLV3   A0A1B0GI61   A0A2A3E4B1   A0A088AIR1   A0A158P0K5   A0A026WP32   U5EWJ7   A0A0M9A3P7   A0A232F4I3   K7ISB5   A0A1L8DHI5   A0A1B6G1P2   Q17PA0   A0A023EIQ7   A0A1Q3F7V8   B0W6N5   A0A069DQQ9   A0A224XSC6   A0A310SHZ0   A0A336K0Z9   A0A2M4BY10   A0A0P4VK37   R4G3G6   A0A182FSV8   W5J723   A0A023FA91   A0A2M4AX31   A0A182IUX4   A0A182QQF8   A0A1W4X5M0   A0A195F2Y2   A0A182NG06   A0A182P2Q5   A0A182TLJ2   D6WD47   A0A232F4Z4   A0A182W132   A0A182RRT2   A0A182WUZ0   A0A182LAH3   Q7QFS3   A0A182I8L6   A0A1I8MP79   A0A182XX64   A0A182K6A8   A0A2R7W921   A0A0A1WHZ9   A0A182UQ83   A0A182SBM1   A0A0N8CF92   E9H9Y7   A0A0P4ZN69   A0A023GFX1   G3MNW4   A0A034WRE7   A0A0K8UNE2   E0VQ81   A0A1S3JWJ1   W8BA79   A0A1I8NX43   A0A224Z9T2   A0A131YUE8   L7M219   A0A023FHU9   A0A182LT27   A0A0P6DU60   A0A1E1WZ10   A0A0A9XN42   A0A0C9SBA9   T1J0H4   A0A1E1XUC3   A0A3M6V363   A0A146M4A0   A0A0L0CNB0   A0A131X999   A0A0A9XQA3   C4A029   A0A3M0JD73   K1QMI9   H9G4R3   A0A3L8SBQ8   A0A218UJB4   A0A2I0M9V5  

Pubmed

19121390    28756777    22118469    22651552    26354079    23622113    + More
29403074    24845553    21347285    24508170    30249741    28648823    20075255    17510324    24945155    26334808    27129103    20920257    23761445    25474469    18362917    19820115    20966253    12364791    14747013    17210077    25315136    25244985    25830018    21292972    22216098    25348373    20566863    24495485    28797301    26830274    25576852    28503490    25401762    26823975    26131772    29209593    30382153    26108605    28049606    18563158    22992520    21881562    30282656    23371554   

EMBL

BABH01019333    KZ149988    PZC75646.1    NWSH01004103    PCG65494.1    GDQN01004249    + More
JAT86805.1    ODYU01003979    SOQ43394.1    AGBW02014225    OWR42058.1    AK403923    BAM20034.1    KQ460473    KPJ14384.1    GAIX01013376    JAA79184.1    NEVH01020869    PNF20780.1    PYGN01000072    PSN55326.1    KK852818    KDR15728.1    KQ459595    KPI95830.1    GECU01006309    JAT01398.1    GEBQ01008844    JAT31133.1    GECZ01018594    JAS51175.1    AJWK01011391    KZ288410    PBC26096.1    ADTU01005248    KK107139    QOIP01000003    EZA57817.1    RLU25228.1    GANO01001384    JAB58487.1    KQ435758    KOX75816.1    NNAY01000967    OXU25681.1    GFDF01008162    JAV05922.1    GECZ01013411    JAS56358.1    CH477193    EAT48531.1    GAPW01004270    JAC09328.1    GFDL01011413    JAV23632.1    DS231849    EDS36866.1    GBGD01002848    JAC86041.1    GFTR01003698    JAW12728.1    KQ768090    OAD53210.1    UFQS01000039    UFQT01000039    SSW98117.1    SSX18503.1    GGFJ01008825    MBW57966.1    GDKW01004024    JAI52571.1    ACPB03017117    GAHY01001696    JAA75814.1    ADMH02002125    ETN58665.1    GBBI01000874    JAC17838.1    GGFK01012023    MBW45344.1    AXCN02000343    KQ981856    KYN34537.1    KQ971312    EEZ98316.2    OXU25682.1    AAAB01008844    EAA06021.5    APCN01003086    KK854477    PTY16203.1    GBXI01016152    JAC98139.1    GDIP01137511    JAL66203.1    GL732609    EFX71485.1    GDIP01214623    GDIP01077516    LRGB01001361    JAJ08779.1    JAM26199.1    KZS12588.1    GBBM01002649    JAC32769.1    JO843565    AEO35182.1    GAKP01002025    GAKP01002023    JAC56927.1    GDHF01024117    JAI28197.1    DS235402    EEB15537.1    GAMC01008385    JAB98170.1    GFPF01012344    MAA23490.1    GEDV01006781    JAP81776.1    GACK01007112    JAA57922.1    GBBK01003802    JAC20680.1    AXCM01008656    GDIQ01241566    GDIQ01072925    JAN21812.1    GFAC01006918    JAT92270.1    GBHO01021507    GDHC01014679    JAG22097.1    JAQ03950.1    GBZX01002078    JAG90662.1    JH431734    GFAA01000516    JAU02919.1    RCHS01000199    RMX60300.1    GDHC01004046    JAQ14583.1    JRES01000145    KNC33833.1    GEFH01005108    JAP63473.1    GBHO01021505    JAG22099.1    GG666778    EEN41855.1    QRBI01000151    RMB98971.1    JH817762    EKC38037.1    AAWZ02017461    QUSF01000031    RLV99676.1    MUZQ01000288    OWK53462.1    AKCR02000026    PKK26449.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000235965    UP000245037    + More
UP000027135    UP000053268    UP000092461    UP000242457    UP000005203    UP000005205    UP000053097    UP000279307    UP000053105    UP000215335    UP000002358    UP000008820    UP000002320    UP000015103    UP000069272    UP000000673    UP000075880    UP000075886    UP000192223    UP000078541    UP000075884    UP000075885    UP000075902    UP000007266    UP000075920    UP000075900    UP000076407    UP000075882    UP000007062    UP000075840    UP000095301    UP000076408    UP000075881    UP000075903    UP000075901    UP000000305    UP000076858    UP000009046    UP000085678    UP000095300    UP000075883    UP000275408    UP000037069    UP000001554    UP000269221    UP000005408    UP000001646    UP000276834    UP000197619    UP000053872   

PRIDE

H9JNG7   

Pfam

PF05615   THOC7

Interpro

IPR008501   THOC7/Mft1        + More
IPR006594   LisH       
IPR040369   ARMC9       
IPR011990   TPR-like_helical_dom_sf       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JNG7   A0A2W1BSM6   A0A2A4J1V3   A0A1E1WII7   A0A2H1VT37   A0A212EKS7   + More
I4DQ44   A0A194RA53   S4NQ10   A0A2J7PWS4   A0A2P8ZFP3   A0A067QZ86   A0A194PXF8   A0A1B6JQG2   A0A1B6M5F0   A0A1B6FLV3   A0A1B0GI61   A0A2A3E4B1   A0A088AIR1   A0A158P0K5   A0A026WP32   U5EWJ7   A0A0M9A3P7   A0A232F4I3   K7ISB5   A0A1L8DHI5   A0A1B6G1P2   Q17PA0   A0A023EIQ7   A0A1Q3F7V8   B0W6N5   A0A069DQQ9   A0A224XSC6   A0A310SHZ0   A0A336K0Z9   A0A2M4BY10   A0A0P4VK37   R4G3G6   A0A182FSV8   W5J723   A0A023FA91   A0A2M4AX31   A0A182IUX4   A0A182QQF8   A0A1W4X5M0   A0A195F2Y2   A0A182NG06   A0A182P2Q5   A0A182TLJ2   D6WD47   A0A232F4Z4   A0A182W132   A0A182RRT2   A0A182WUZ0   A0A182LAH3   Q7QFS3   A0A182I8L6   A0A1I8MP79   A0A182XX64   A0A182K6A8   A0A2R7W921   A0A0A1WHZ9   A0A182UQ83   A0A182SBM1   A0A0N8CF92   E9H9Y7   A0A0P4ZN69   A0A023GFX1   G3MNW4   A0A034WRE7   A0A0K8UNE2   E0VQ81   A0A1S3JWJ1   W8BA79   A0A1I8NX43   A0A224Z9T2   A0A131YUE8   L7M219   A0A023FHU9   A0A182LT27   A0A0P6DU60   A0A1E1WZ10   A0A0A9XN42   A0A0C9SBA9   T1J0H4   A0A1E1XUC3   A0A3M6V363   A0A146M4A0   A0A0L0CNB0   A0A131X999   A0A0A9XQA3   C4A029   A0A3M0JD73   K1QMI9   H9G4R3   A0A3L8SBQ8   A0A218UJB4   A0A2I0M9V5  

KEGG

101735721    K13176 THO complex subunit 7 | (RefSeq) THO complex subunit 7 homolog

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0000445   GO:0006397   GO:0036064   GO:0060271   GO:0006406   GO:0046784   GO:0005829   GO:0000784   GO:0016607   GO:0006259   GO:0004930   GO:0016491   GO:0016620   GO:0016787   GO:0003676   GO:0015930  

PANTHER

PTHR14881  

Length:

202

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00015

Exp number, first 60 AAs:

0

Total prob of N-in:

0.24092

outside

1  -  202

 

 

Pi

239.93742

Theta

206.171883

Tajima's D

0.553263

CLR

0.441848

CSRT

0.526923653817309

Interpretation

Uncertain