SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13626
Annotation
PREDICTED:_stress_response_protein_NST1-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.327
 

Sequence

CDS
ATGAAATCTTCGAGAGGAAAAATACATTTGTTTGTAGTCCCTAAATACAAAAGACCACAAATTTTCATTGAACAACAAAGGAGAGGCTCTTTGCCGATGACTCTAAAGAACTATTCAGAGAAACCGACAATAGTACAGGTATGCAATAGAAGAACGAGATTCAAAGATCATGGGGCAATTCGGAATTTTGAAACGCGCACACATAGATATAGGAAACCTTACAGAAAAGAACAATGCGATGAAAAATACATTACACGCAGCAAAAAAAGAGGTTATAAAAGAAAATATGTTTTGGAAAAAAAGTCGGAGTCATTACCACCTCCTCGATCAGAAAGGAAAATGAAATTAAAGGGACGCTCTGTAAGTGCCAAGCCGCGATACGAAACAAGATATGTCAGCGTTAGCAGAAGCCCCCCCAAAGAGCCACTAGGTCGGAGATGCGCAAACTGTTTCTATAGAGTTTGCTGTCAATTCTATTGCTATCTCACTTGTATAGCGATGTTCACTTTTTGCATTATTTATGTTTTGTAA
Protein
MKSSRGKIHLFVVPKYKRPQIFIEQQRRGSLPMTLKNYSEKPTIVQVCNRRTRFKDHGAIRNFETRTHRYRKPYRKEQCDEKYITRSKKRGYKRKYVLEKKSESLPPPRSERKMKLKGRSVSAKPRYETRYVSVSRSPPKEPLGRRCANCFYRVCCQFYCYLTCIAMFTFCIIYVL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
176
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.15131
Exp number, first 60 AAs:
0
Total prob of N-in:
0.95945
inside
1  -  157
TMhelix
158  -  175
outside
176  -  176
 
 

Population Genetic Test Statistics

Pi
243.343134
Theta
183.437077
Tajima's D
1.03378
CLR
0.446459
CSRT
0.665116744162792
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号