Gene

KWMTBOMO13615

Pre Gene Modal

BGIBMGA011057

Annotation

PREDICTED:_spondin-2_[Amyelois_transitella]

Location

Bomo_Chr23(+):2949374-3010535      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.402 Nuclear   Reliability : 1.856

CDS

ATGGCGACGTTTATATTCGCGCTATTGCTGCCCGCGTTTGCCGCGGCCGCGCTGTCTCCCAGTGACACGGACGCTTGTAATCCAGATAAAATGACAGTGTATAAAATGGTGCTCCACACGTATTGGACGAGAGAGAAATTCCCGAAACATTACCCAGAGTGGAGACCACCGGCTCAGTGGTCGAAAATTTACGGGGTCTCCCACAATCGGTCACACGTTTTGTTCCGTTTGGGTCGTCGGGTTTCGCCTCAAGTGCGCCAGTTTGCGGAGACCGGACGATCGGACGCGCTAGGCTCCGGTCCGGGGACTTTAGACGTGTTCGGCGCGCCGCCGGTTAGTCAGGGCGCCGGACGCACTGAAGCCCAGTTCTTTGTCGACGGGAATCATTCTAGGGTATCTGTCATGGCGCGCATGGTTCCATCTCCGGACTGGTTCATCGGTGTGGACAGTTTTGATCTTTGCGTCGATGGCAATTGGCTGGACAGCATAACTATTGAGGTAGATCCTCTCGATGCTGGCACAGACAACGGCTTTTCGTTTACAGCACCGAATTGGACGACAGCTCCTCAAGGAGTTGCCTATCGCATCACTTCGAAATACCCCTCGCATCCAGCCGGTTCATTTTTCTATCCCCATTTGAGAAGACTACCGCCTATAGCGACCTTTCAGTTCATTAAACTTCGGGAATACGAATTAACAGAGGTATTCCATCGAACGAGCGACGATAAAAAATACGACGTTCTACAACTCGACAAGATGAGTCACAACAATATTGACGTGCTCGATGGGAACAGGGCGCTCTCTGTCGCAGAGGAAGTGGAACGAGCCGAGCAAGCACCCAGGATATACGTTGACGGCGCTTTAACCACACCCGATGGGGCTTATTCATATTACACTATTGTCAATTCATCGAGTACCACCGAGGAGCCTCGATCAGCGAACGAGTTGCCCACGTCTGGACCGACCGCAAGTGAGCGCTCGGCTTTGCGAAGTCTGGCGCGCCGGGCCCGAGCGCGGAGGCGACGCAAGCTCCGAGCTGACAATACTGACCCCGCCGAGCGGAGACGACGGAAAAGGACAAGGTTGCTAAGCTGCCGGGTGTCAGACTGGAGCGAGTGGAGCGCTTGCCGCAGCGACGGCGGTTGCGTCGGCTCGGCGATGCGCACGCGGCGGATCATACGTCGGCAGCGGCCCGGCGGCGCGCCCTGCCCGCCCACCGCCCAGTCGAGGTGGTGCGCCACCAACTGTACCGCCCACAGCGACGAAGACTGGCGGAACAACCTTACGTAA

Protein

MATFIFALLLPAFAAAALSPSDTDACNPDKMTVYKMVLHTYWTREKFPKHYPEWRPPAQWSKIYGVSHNRSHVLFRLGRRVSPQVRQFAETGRSDALGSGPGTLDVFGAPPVSQGAGRTEAQFFVDGNHSRVSVMARMVPSPDWFIGVDSFDLCVDGNWLDSITIEVDPLDAGTDNGFSFTAPNWTTAPQGVAYRITSKYPSHPAGSFFYPHLRRLPPIATFQFIKLREYELTEVFHRTSDDKKYDVLQLDKMSHNNIDVLDGNRALSVAEEVERAEQAPRIYVDGALTTPDGAYSYYTIVNSSSTTEEPRSANELPTSGPTASERSALRSLARRARARRRRKLRADNTDPAERRRRKRTRLLSCRVSDWSEWSACRSDGGCVGSAMRTRRIIRRQRPGGAPCPPTAQSRWCATNCTAHSDEDWRNNLT

Uniprot

A0A2W1B5U4   A0A3S2P8N1   A0A0N1PF03   A0A194PSW2   A0A2A4JLK1   A0A212EKJ4   + More
A0A1Y1KXE1   A0A139WM89   A0A1B6BXP8   A0A1B6CB16   A0A023F2X7   A0A0L7KM09   A0A1B0C2L4   A0A034V8C6   A0A2S2Q092   A0A2J7Q4H2   A0A0K8UNA0   A0A2H8TQY3   B4KTY4   A0A0L0C7W9   B3NQU0   E9GZI6   T1HQD4   A0A1W4UHF8   B4HRN1   A0A0N8BCK7   O02029   A0A0P6ABS3   A0A1A9URD8   A0A1A9XYU2   B4P790   A0A0M3QV42   A0A1I8NGH8   A0A2J7PXN3   A0A0P5JYW4   A0A1B0FJJ6   A0A0P6EP34   A0A0P4YIW6   A0A0P5VKU9  

Pubmed

28756777    26354079    22118469    28004739    18362917    19820115    + More
25474469    26227816    25348373    17994087    26108605    21292972    9205137    17550304    25315136   

EMBL

KZ150295    PZC71562.1    RSAL01000002    RVE55021.1    RVE55073.1    KQ461153    + More
KPJ08656.1    KQ459595    KPI95849.1    NWSH01001167    PCG72290.1    AGBW02014265    OWR42007.1    GEZM01074990    JAV64355.1    KQ971316    KYB29003.1    GEDC01031509    JAS05789.1    GEDC01026610    JAS10688.1    GBBI01002775    JAC15937.1    JTDY01008881    KOB64347.1    JXJN01024581    JXJN01024582    JXJN01024583    GAKP01020202    GAKP01020198    JAC38754.1    GGMS01001890    MBY71093.1    NEVH01018382    PNF23488.1    GDHF01024145    JAI28169.1    GFXV01004792    MBW16597.1    CH933808    EDW10710.1    JRES01000890    KNC27499.1    CH954179    EDV56000.1    GL732578    EFX74998.1    ACPB03007171    ACPB03007172    CH480816    EDW47895.1    GDIQ01191003    GDIP01120142    GDIP01065559    LRGB01002536    JAK60722.1    JAL83572.1    KZS07206.1    AF000178    AAB58341.1    GDIP01032138    JAM71577.1    CM000158    EDW91055.1    CP012524    ALC41759.1    NEVH01020853    PNF21095.1    GDIQ01193162    JAK58563.1    CCAG010020179    CCAG010020180    GDIQ01059855    JAN34882.1    GDIP01228090    JAI95311.1    GDIP01098598    JAM05117.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    UP000007266    + More
UP000037510    UP000092460    UP000235965    UP000009192    UP000037069    UP000008711    UP000000305    UP000015103    UP000192221    UP000001292    UP000076858    UP000078200    UP000092443    UP000002282    UP000092553    UP000095301    UP000092444   

PRIDE

O02029   

Pfam

PF06468   Spond_N        + More
PF00090   TSP_1

Interpro

IPR009465   Spondin_N        + More
IPR036383   TSP1_rpt_sf       
IPR000884   TSP1_rpt       
IPR038678   Spondin_N_sf       

SUPFAM

SSF82895   SSF82895       

Gene 3D

2.20.100.10     2.60.40.2130    

ProteinModelPortal

A0A2W1B5U4   A0A3S2P8N1   A0A0N1PF03   A0A194PSW2   A0A2A4JLK1   A0A212EKJ4   + More
A0A1Y1KXE1   A0A139WM89   A0A1B6BXP8   A0A1B6CB16   A0A023F2X7   A0A0L7KM09   A0A1B0C2L4   A0A034V8C6   A0A2S2Q092   A0A2J7Q4H2   A0A0K8UNA0   A0A2H8TQY3   B4KTY4   A0A0L0C7W9   B3NQU0   E9GZI6   T1HQD4   A0A1W4UHF8   B4HRN1   A0A0N8BCK7   O02029   A0A0P6ABS3   A0A1A9URD8   A0A1A9XYU2   B4P790   A0A0M3QV42   A0A1I8NGH8   A0A2J7PXN3   A0A0P5JYW4   A0A1B0FJJ6   A0A0P6EP34   A0A0P4YIW6   A0A0P5VKU9  

PDB

3D34     E-value=1.99817e-44,     Score=451

KEGG

101741469    no KO assigned | (RefSeq) spondin-2

GO

GO:0031012   GO:0007155   GO:1901739  

SignalP

Position:   1 - 17,         Likelihood:  0.995389

 

 

Length:

429

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16459

Exp number, first 60 AAs:

0.16459

Total prob of N-in:

0.00849

outside

1  -  429

 

 

Pi

275.129176

Theta

175.630075

Tajima's D

1.692596

CLR

0.380604

CSRT

0.826558672066397

Interpretation

Uncertain