SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13612
Pre Gene Modal
BGIBMGA011054
Annotation
PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.992
 

Sequence

CDS
ATGGCTGCCCAAAAAGAGCTTCGAGATCAGATACAGAATCTGGAGAAGAGGGAAAATGCAGGGATCCAATTGCTGAAACAGGCGGACTGCATGTGGACGTGCATGGAAGACGCTTACAAAAAGAAAGTAGAGGATTCGCTGGAGAGGCAGAAGACTTTGTTGGAAGAGTTAAAAGAAGTTGAGACCAGTGCAACGAAATGGCGTAAAAACAAAAAAGATTTAGAATCCCAATTGAAAAACATTGAAAAATGCGAAAAAGAAATTAAGGAGAAGATAAATCTAAAAACGAACGATTTGAAATGCGTCAACAATGAAATTGACGATTTCCAAAAGAGAATCGATAAGAACAAAAAGGAAATTGATGCGGCGACTAAATCTTTGACAACGAAGAAACAAGCTTCTGACCTAAAAGTGGCTAATTTAGCATCAGATATAGCGAAAAAACAAACTGTTATATCGGACGAAACAAAGAATAAAGAAAAAAAAGAGAGAGATGGTATCAATTTCGTGAAAGACGCACGAGAAGACCTGCAGAAGCTCTGCAGGGTTTTGCTACAGAAAAGGATCGAAAACGAAGATTTGAGGGCAGAGAGAGATGCACTCAACCTCGAAATTGATTTACTAAACAAATCTCATGACGCATGTCAAGATAAATGCGCTCAGAAGCAACAATCGATTTTAGAGGAAATCAAATTAACTGACCAGGAAATCGCAAAATACAAAACGAAATGTGTTAAATGCCATCAGTGTACCGATACTATTGACGTCAGGAAGTATTGCACCGACTGCCCTAGATGCTCTGTTGAAAGGGATTGTCTATACGAAGACGATAAATGTAGGCCAGACGATACGTTGGATTGTGTCTGTATGAGCGTCAAAGAGAAACTTCTAGATAACATATTTGACAATATGTATACCGTGCTAGAGAGGCAAGCGAAGACCGAAAAAGGAAAAGCTGTAGGTGGTGCGATATTGAAATGCTTGAAAAAAAGTAGAAACGGAAAATTGGATGCGGCCACAAGGAAGTTGCTACAAGATTTCGTTTTGACTACAGTTAAGCAACATTTGAACCTAACCATTGTCGGCGGTGCTGTGAAAACTAGATGTGAAATGGACCCTGAAACACATAAACAGTTGATGCTTTGCTTGAAACAAGTTACAGTCGTTGGACCTCCTAAAGAGGATAAAGGGACTGCTTCCAAAAAGGAGTCGTGCCGTCGCTGGGGCGGTGAATGCAACTGTCCGAAAGGTGGCAAAGGCTGTGTGTGTGATAAAATTGCTCCGCCTCTACCACCAGAAGAACCTTCAATTCCAGAAGGAGTAGATAATGCAGAAACATGTAAAGTTTCATTTTGTCCTCGCAAAACGTCGACTTCGTGCGGTCCCGACGTCGCCATGCAAGCCGTGCCTAGTAGAGTCGGAGCCGAGGTGGCTGCCCTAAAGCCGGACGCTTGTAAAGACTCTACTTGTGCCTATCCGAAGAACATGAGGGCGGCTCAGTGCGTGCTGGGACCGGAGATACTAAATTCGCCAACCAAAGGCAGCAGATTATCAGTGCCTTTTCGACCAGAGATTCCTGTTTTGGACGAAAAGTTCTGCGATTGCAGTATATCTTCAGTCAAATCTTGTGTCTGCAGAGATTTAGAGAATAGTCCACGCGATCGTATTATTGAAGAAGTAATGGGAAGGTACATTGAGGTCCAGCCTATAGATAAAGTAGCCAATGTGGGTGAAATACAGTTTGGAGAGATCGCGAAAGCTTCTGGTAGCTCGACGGGTTATATCATTTCAAGACCGCTTTCATCAATGAGCGATGAATTCGTACCTCAGAGAGAATTTGTACAAAACGAAAATGTTCAACGTTATACAACTGCAGCAGTCGATGCTAATAACAAAGACCATAATGTAGTTAAGCCATTCCTAAAAGGCGATTTTTATGCAACGCCAACAAATGAATATGGAAATAAAGTAACTACGGGAATTGCTGTACTATTGAATAAAGATAATTCAGTAAATCGAGCTGTGCACAGAAATACGTTGAACGAAAAAACTGATACAACAAATTTGACTTCTAAGGACAAAAATGGAGATATCGGTGGAAAAACGGACGACAATATCAAGTCTTTGATAAATAATATAATAGTTCCTGATGGAGAAATATTAGATAATGCAAATTTTATGTCTCAAGTAGAGTTTGTAACCGTTGACTCTTTTGTAAGGAGAATCGAGATATTGACAAAATATGGTCGAGACGATTTGAGTGATGTTACCAGAGATGAAATAGAAGTTGAAACACAGCTACTACAAGAACCGGATTTGAAATCTAAATGA
Protein
MAAQKELRDQIQNLEKRENAGIQLLKQADCMWTCMEDAYKKKVEDSLERQKTLLEELKEVETSATKWRKNKKDLESQLKNIEKCEKEIKEKINLKTNDLKCVNNEIDDFQKRIDKNKKEIDAATKSLTTKKQASDLKVANLASDIAKKQTVISDETKNKEKKERDGINFVKDAREDLQKLCRVLLQKRIENEDLRAERDALNLEIDLLNKSHDACQDKCAQKQQSILEEIKLTDQEIAKYKTKCVKCHQCTDTIDVRKYCTDCPRCSVERDCLYEDDKCRPDDTLDCVCMSVKEKLLDNIFDNMYTVLERQAKTEKGKAVGGAILKCLKKSRNGKLDAATRKLLQDFVLTTVKQHLNLTIVGGAVKTRCEMDPETHKQLMLCLKQVTVVGPPKEDKGTASKKESCRRWGGECNCPKGGKGCVCDKIAPPLPPEEPSIPEGVDNAETCKVSFCPRKTSTSCGPDVAMQAVPSRVGAEVAALKPDACKDSTCAYPKNMRAAQCVLGPEILNSPTKGSRLSVPFRPEIPVLDEKFCDCSISSVKSCVCRDLENSPRDRIIEEVMGRYIEVQPIDKVANVGEIQFGEIAKASGSSTGYIISRPLSSMSDEFVPQREFVQNENVQRYTTAAVDANNKDHNVVKPFLKGDFYATPTNEYGNKVTTGIAVLLNKDNSVNRAVHRNTLNEKTDTTNLTSKDKNGDIGGKTDDNIKSLINNIIVPDGEILDNANFMSQVEFVTVDSFVRRIEILTKYGRDDLSDVTRDEIEVETQLLQEPDLKSK

Summary

Ontologies

GO

Topology

Length:
776
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00023
outside
1  -  776
 
 

Population Genetic Test Statistics

Pi
258.91398
Theta
203.563279
Tajima's D
0.803693
CLR
0.376129
CSRT
0.605719714014299
Interpretation
Uncertain
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